RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 TDRPQ86YL5 185 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 ZBED8Q8IZ13 594 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 RIBC1Q8N443 379 aaPredicted RBP15.66■□□□□ 0.1
ATG4B-220ENST00000482507 N4BP2L2Q92802 583 aaPredicted RBP15.66■□□□□ 0.1
ATG4B-220ENST00000482507 PCYT2Q99447 389 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 MMP19Q99542 508 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 MTMR12Q9C0I1 747 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 EBF2Q9HAK2 575 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 KLHL14Q9P2G3 628 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 TJP2Q9UDY2 1190 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 STK38LQ9Y2H1 464 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 MAGEB2O15479 319 aa15.65■□□□□ 0.1
ATG4B-220ENST00000482507 CCNB1P14635 433 aa15.65■□□□□ 0.1
ATG4B-220ENST00000482507 GPX6P59796 221 aa15.65■□□□□ 0.1
ATG4B-220ENST00000482507 LMNB2Q03252 620 aa15.65■□□□□ 0.1
ATG4B-220ENST00000482507 ACVR2BQ13705 512 aa15.65■□□□□ 0.1
ATG4B-220ENST00000482507 KCTD2Q14681 263 aa15.65■□□□□ 0.1
ATG4B-220ENST00000482507 EFTUD2Q15029 972 aaKnown RBP eCLIP15.65■□□□□ 0.13e-7■■□□□ 14.3
ATG4B-220ENST00000482507 DEFB115Q30KQ5 88 aa15.65■□□□□ 0.1
ATG4B-220ENST00000482507 ZBTB33Q86T24 672 aa15.65■□□□□ 0.1
ATG4B-220ENST00000482507 ANKMY2Q8IV38 441 aa15.65■□□□□ 0.1
ATG4B-220ENST00000482507 ARFGAP1Q8N6T3 406 aa15.65■□□□□ 0.1
ATG4B-220ENST00000482507 UTP4Q969X6 686 aaKnown RBP15.65■□□□□ 0.1
ATG4B-220ENST00000482507 CDHR1Q96JP9 859 aa15.65■□□□□ 0.1
ATG4B-220ENST00000482507 WDR83Q9BRX9 315 aaKnown RBP15.65■□□□□ 0.1
ATG4B-220ENST00000482507 MYLK2Q9H1R3 596 aa15.65■□□□□ 0.1
ATG4B-220ENST00000482507 VPS37BQ9H9H4 285 aa15.65■□□□□ 0.1
ATG4B-220ENST00000482507 DRG1Q9Y295 367 aaKnown RBP15.65■□□□□ 0.1
ATG4B-220ENST00000482507 LRRD1A4D1F6 860 aa15.65■□□□□ 0.1
ATG4B-220ENST00000482507 ALOX15BO15296 676 aa15.65■□□□□ 0.1
ATG4B-220ENST00000482507 PRPF4O43172 522 aaKnown RBP eCLIP15.65■□□□□ 0.11e-6■■■■■ 30.2
ATG4B-220ENST00000482507 LDHAP00338 332 aaKnown RBP15.65■□□□□ 0.1
ATG4B-220ENST00000482507 GDF10P55107 478 aa15.65■□□□□ 0.1
ATG4B-220ENST00000482507 MCL1Q07820 350 aa15.65■□□□□ 0.1
ATG4B-220ENST00000482507 LRRC38Q5VT99 294 aa15.65■□□□□ 0.1
ATG4B-220ENST00000482507 ANKRD22Q5VYY1 191 aa15.65■□□□□ 0.1
ATG4B-220ENST00000482507 GIMAP7Q8NHV1 300 aa15.65■□□□□ 0.1
ATG4B-220ENST00000482507 MAK16Q9BXY0 300 aaKnown RBP15.65■□□□□ 0.1
ATG4B-220ENST00000482507 CISHQ9NSE2 258 aa15.65■□□□□ 0.1
ATG4B-220ENST00000482507 CLUHO75153 1309 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 IFNB1P01574 187 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 RPSAP08865 295 aaKnown RBP15.64■□□□□ 0.09
ATG4B-220ENST00000482507 WEE2P0C1S8 567 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 ABCD1P33897 745 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 MSH2P43246 934 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 MYO1EQ12965 1108 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 MORF4L2Q15014 288 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 GNPTABQ3T906 1256 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 MSS51Q4VC12 460 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 TFDP3Q5H9I0 405 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 DCUN1D2Q6PH85 259 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 DHX37Q8IY37 1157 aaKnown RBP15.64■□□□□ 0.09
ATG4B-220ENST00000482507 TMEM130Q8N3G9 435 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 SLC7A3Q8WY07 619 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 NKD2Q969F2 451 aaPredicted RBP15.64■□□□□ 0.09
ATG4B-220ENST00000482507 PLCD4Q9BRC7 762 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 PHTF1Q9UMS5 762 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 CHKBQ9Y259 395 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 TYROBPO43914 113 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 ANP32DO95626 131 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 CALB1P05937 261 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 KRT15P19012 456 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 CETN2P41208 172 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 GCLCP48506 637 aaPredicted RBP15.64■□□□□ 0.09
ATG4B-220ENST00000482507 PDIA2Q13087 525 aaKnown RBP15.64■□□□□ 0.09
ATG4B-220ENST00000482507 CRHR2Q13324 411 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 MTM1Q13496 603 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 SMTNL2Q2TAL5 461 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 SCARA5Q6ZMJ2 495 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 BRSK2Q8IWQ3 736 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 KIAA0319LQ8IZA0 1049 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 SLC35B2Q8TB61 432 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 CCHCR1Q8TD31 782 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 TTC25Q96NG3 672 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 NIFKQ9BYG3 293 aaKnown RBP15.64■□□□□ 0.09
ATG4B-220ENST00000482507 MROH8Q9H579 483 aa15.64■□□□□ 0.09
ATG4B-220ENST00000482507 SGK1O00141 431 aa15.63■□□□□ 0.09
ATG4B-220ENST00000482507 ADCY3O60266 1144 aa15.63■□□□□ 0.09
ATG4B-220ENST00000482507 UNC5CO95185 931 aa15.63■□□□□ 0.09
ATG4B-220ENST00000482507 ITGAVP06756 1048 aa15.63■□□□□ 0.09
ATG4B-220ENST00000482507 IL1R2P27930 398 aa15.63■□□□□ 0.09
ATG4B-220ENST00000482507 PTPN7P35236 360 aa15.63■□□□□ 0.09
ATG4B-220ENST00000482507 DYNLT1P63172 113 aa15.63■□□□□ 0.09
ATG4B-220ENST00000482507 TARBP2Q15633 366 aaKnown RBP15.63■□□□□ 0.09
ATG4B-220ENST00000482507 RPAINQ86UA6 219 aa15.63■□□□□ 0.09
ATG4B-220ENST00000482507 TAB3Q8N5C8 712 aaPredicted RBP15.63■□□□□ 0.09
ATG4B-220ENST00000482507 GRAMD1AQ96CP6 724 aa15.63■□□□□ 0.09
ATG4B-220ENST00000482507 CAPNS2Q96L46 248 aa15.63■□□□□ 0.09
ATG4B-220ENST00000482507 FGD4Q96M96 766 aa15.63■□□□□ 0.09
ATG4B-220ENST00000482507 TACO1Q9BSH4 297 aaKnown RBP15.63■□□□□ 0.09
ATG4B-220ENST00000482507 UBN1Q9NPG3 1134 aa15.63■□□□□ 0.09
ATG4B-220ENST00000482507 CYTH4Q9UIA0 394 aa15.63■□□□□ 0.09
ATG4B-220ENST00000482507 STARD13Q9Y3M8 1113 aa15.63■□□□□ 0.09
ATG4B-220ENST00000482507 FARP1Q9Y4F1 1045 aaPredicted RBP15.63■□□□□ 0.09
ATG4B-220ENST00000482507 IGKV6D-21A0A0A0MT36 114 aa15.63■□□□□ 0.09
ATG4B-220ENST00000482507 ADORA2AP29274 412 aa15.63■□□□□ 0.09
ATG4B-220ENST00000482507 RFC1P35251 1148 aaPredicted RBP15.63■□□□□ 0.09
ATG4B-220ENST00000482507 APLP1P51693 650 aa15.63■□□□□ 0.09
ATG4B-220ENST00000482507 PLCB3Q01970 1234 aa15.63■□□□□ 0.09
ATG4B-220ENST00000482507 CCDC15Q0P6D6 951 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms