RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 TTC9BQ8N6N2 239 aa9.75□□□□□ -0.85
HLA-B-253ENST00000481849 ZSCAN18Q8TBC5 510 aaPredicted RBP9.75□□□□□ -0.85
HLA-B-253ENST00000481849 ELSPBP1Q96BH3 223 aa9.75□□□□□ -0.85
HLA-B-253ENST00000481849 ASB16Q96NS5 453 aa9.75□□□□□ -0.85
HLA-B-253ENST00000481849 TMEM209Q96SK2 561 aa9.75□□□□□ -0.85
HLA-B-253ENST00000481849 TRMT61BQ9BVS5 477 aaKnown RBP9.75□□□□□ -0.85
HLA-B-253ENST00000481849 IKZF4Q9H2S9 585 aa9.75□□□□□ -0.85
HLA-B-253ENST00000481849 ASAH2Q9NR71 780 aa9.75□□□□□ -0.85
HLA-B-253ENST00000481849 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.75□□□□□ -0.85
HLA-B-253ENST00000481849 A0A0B4J269 797 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 XPOTO43592 962 aaKnown RBP9.74□□□□□ -0.85
HLA-B-253ENST00000481849 FAM189A1O60320 539 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 OAZ2O95190 189 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 IGHA1P01876 353 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 CYP3A5P20815 502 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 LONP1P36776 959 aaKnown RBP9.74□□□□□ -0.85
HLA-B-253ENST00000481849 MCM2P49736 904 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 ZNF131P52739 623 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 CENPCQ03188 943 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 CEBPZQ03701 1054 aaKnown RBP9.74□□□□□ -0.85
HLA-B-253ENST00000481849 STXBP5Q5T5C0 1151 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 C9orf57Q5W0N0 161 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 ADALQ6DHV7 355 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 VITQ6UXI7 678 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 ZNF852Q6ZMS4 543 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 USP49Q70CQ1 688 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 DYMQ7RTS9 669 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 ATAD1Q8NBU5 361 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 BEST2Q8NFU1 509 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 TTC8Q8TAM2 541 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 SHKBP1Q8TBC3 707 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 FAM200AQ8TCP9 573 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 SMARCD2Q92925 531 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 EPSTI1Q96J88 318 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 SENP8Q96LD8 212 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 SEMA4AQ9H3S1 761 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 PRM3Q9NNZ6 103 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 TBC1D7Q9P0N9 293 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 CLIC4Q9Y696 253 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 MYO10Q9HD67 2058 aa9.74□□□□□ -0.85
HLA-B-253ENST00000481849 MTMR11A4FU01 709 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 OR6C75A6NL08 312 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 SHISA7A6NL88 538 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 HEPACAM2A8MVW5 462 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 ZNF263O14978 683 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 NCAM2O15394 837 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 SLC26A4O43511 780 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 KINO60870 393 aaKnown RBP9.73□□□□□ -0.85
HLA-B-253ENST00000481849 BMP15O95972 392 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 PIGRP01833 764 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 ODC1P11926 461 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 PSMC3P17980 439 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 ALDH1A3P47895 512 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 AARSP49588 968 aaKnown RBP eCLIP9.73□□□□□ -0.85
HLA-B-253ENST00000481849 EPHB3P54753 998 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 LILRA4P59901 499 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 GPR17Q13304 367 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 PLD1Q13393 1074 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 TMEM132DQ14C87 1099 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 KYAT1Q16773 422 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 SLC39A12Q504Y0 691 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 SPATA1Q5VX52 437 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 ARMCX5Q6P1M9 558 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 FAM173BQ6P4H8 233 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 BRAPQ7Z569 592 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 SFR1Q86XK3 245 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 MAP4K3Q8IVH8 894 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 YAF2Q8IY57 180 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 BEND7Q8N7W2 519 aaPredicted RBP9.73□□□□□ -0.85
HLA-B-253ENST00000481849 ATRIPQ8WXE1 791 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 LARP4BQ92615 738 aaKnown RBP9.73□□□□□ -0.85
HLA-B-253ENST00000481849 RSPRY1Q96DX4 576 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 FIZ1Q96SL8 496 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 SEPT5Q99719 369 aaPredicted RBP9.73□□□□□ -0.85
HLA-B-253ENST00000481849 OSBPL6Q9BZF3 934 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 DNAJC25Q9H1X3 360 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 ZNF334Q9HCZ1 680 aaPredicted RBP9.73□□□□□ -0.85
HLA-B-253ENST00000481849 CPSF3Q9UKF6 684 aaKnown RBP9.73□□□□□ -0.85
HLA-B-253ENST00000481849 FBXO4Q9UKT5 387 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 MAFFQ9ULX9 164 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 MRPS17Q9Y2R5 130 aaKnown RBP9.73□□□□□ -0.85
HLA-B-253ENST00000481849 PIAS3Q9Y6X2 628 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 NCANO14594 1321 aa9.73□□□□□ -0.85
HLA-B-253ENST00000481849 VWA8A3KMH1 1905 aa9.72□□□□□ -0.85
HLA-B-253ENST00000481849 MICAL2O94851 1124 aa9.72□□□□□ -0.85
HLA-B-253ENST00000481849 TYMPP19971 482 aa9.72□□□□□ -0.85
HLA-B-253ENST00000481849 CCNE1P24864 410 aa9.72□□□□□ -0.85
HLA-B-253ENST00000481849 DDIT3P35638 169 aa9.72□□□□□ -0.85
HLA-B-253ENST00000481849 GTF2BQ00403 316 aa9.72□□□□□ -0.85
HLA-B-253ENST00000481849 MTAPQ13126 283 aa9.72□□□□□ -0.85
HLA-B-253ENST00000481849 RSPO4Q2I0M5 234 aaPredicted RBP9.72□□□□□ -0.85
HLA-B-253ENST00000481849 MGAT5BQ3V5L5 792 aa9.72□□□□□ -0.85
HLA-B-253ENST00000481849 CENPPQ6IPU0 288 aa9.72□□□□□ -0.85
HLA-B-253ENST00000481849 LRSAM1Q6UWE0 723 aa9.72□□□□□ -0.85
HLA-B-253ENST00000481849 DNAJB7Q7Z6W7 309 aaPredicted RBP9.72□□□□□ -0.85
HLA-B-253ENST00000481849 TMC8Q8IU68 726 aa9.72□□□□□ -0.85
HLA-B-253ENST00000481849 CD302Q8IX05 232 aa9.72□□□□□ -0.85
HLA-B-253ENST00000481849 LEMD2Q8NC56 503 aa9.72□□□□□ -0.85
HLA-B-253ENST00000481849 OR10T2Q8NGX3 314 aa9.72□□□□□ -0.85
HLA-B-253ENST00000481849 NOC3LQ8WTT2 800 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms