RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	THEMIS2	Q5TEJ8	643 aa		4.19	□□□□□ -1.74
CCNL1-223	ENST00000481173	PXDC1	Q5TGL8	231 aa		4.19	□□□□□ -1.74
CCNL1-223	ENST00000481173	CPA6	Q8N4T0	437 aa		4.19	□□□□□ -1.74
CCNL1-223	ENST00000481173	PNLDC1	Q8NA58	520 aa	Known RBP	4.19	□□□□□ -1.74
CCNL1-223	ENST00000481173	FAM46D	Q8NEK8	389 aa		4.19	□□□□□ -1.74
CCNL1-223	ENST00000481173	SPATA3	Q8NHX4	192 aa		4.19	□□□□□ -1.74
CCNL1-223	ENST00000481173	ATRIP	Q8WXE1	791 aa		4.19	□□□□□ -1.74
CCNL1-223	ENST00000481173	HSPBAP1	Q96EW2	488 aa		4.19	□□□□□ -1.74
CCNL1-223	ENST00000481173	C5orf34	Q96MH7	638 aa		4.19	□□□□□ -1.74
CCNL1-223	ENST00000481173	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.19	□□□□□ -1.74
CCNL1-223	ENST00000481173	EBF3	Q9H4W6	596 aa		4.19	□□□□□ -1.74
CCNL1-223	ENST00000481173	WDCP	Q9H6R7	721 aa		4.19	□□□□□ -1.74
CCNL1-223	ENST00000481173	PNPO	Q9NVS9	261 aa		4.19	□□□□□ -1.74
CCNL1-223	ENST00000481173	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.19	□□□□□ -1.74
CCNL1-223	ENST00000481173	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173		H3BUI4	141 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	MYO1F	O00160	1098 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	PPM1D	O15297	605 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	DTNB	O60941	627 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	NXPH3	O95157	252 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	ARIH2	O95376	493 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	CHEK2	O96017	543 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	TYR	P14679	529 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	HDC	P19113	662 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	CD6	P30203	668 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	GCLC	P48506	637 aa	Predicted RBP	4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	PLCD1	P51178	756 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	ZNF134	P52741	427 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	EXOSC9	Q06265	439 aa	Known RBP	4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	LAMB3	Q13751	1172 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	PGS1	Q32NB8	556 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173		Q4G0T1	1027 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	TMEM108	Q6UXF1	575 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	NAPRT	Q6XQN6	538 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	CATSPERG	Q6ZRH7	1159 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	ZBTB46	Q86UZ6	589 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	CHSY1	Q86X52	802 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	ZDHHC17	Q8IUH5	632 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	GALNT16	Q8N428	558 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	FAM136A	Q96C01	138 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	MACROD1	Q9BQ69	325 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	GTPBP4	Q9BZE4	634 aa	Known RBP	4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	IP6K2	Q9UHH9	426 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	AFG3L2	Q9Y4W6	797 aa		4.18	□□□□□ -1.74
CCNL1-223	ENST00000481173	QSOX1	O00391	747 aa		4.17	□□□□□ -1.74
CCNL1-223	ENST00000481173	ADAMTS3	O15072	1205 aa		4.17	□□□□□ -1.74
CCNL1-223	ENST00000481173	SLC16A6	O15403	523 aa		4.17	□□□□□ -1.74
CCNL1-223	ENST00000481173	GNAI2	P04899	355 aa		4.17	□□□□□ -1.74
CCNL1-223	ENST00000481173	CYP2C18	P33260	490 aa		4.17	□□□□□ -1.74
CCNL1-223	ENST00000481173	ALDH9A1	P49189	494 aa		4.17	□□□□□ -1.74
CCNL1-223	ENST00000481173	EEFSEC	P57772	596 aa	Known RBP	4.17	□□□□□ -1.74
CCNL1-223	ENST00000481173	LINC00205	P59089	165 aa		4.17	□□□□□ -1.74
CCNL1-223	ENST00000481173	CYP4F2	P78329	520 aa		4.17	□□□□□ -1.74
CCNL1-223	ENST00000481173	SP2	Q02086	613 aa		4.17	□□□□□ -1.74
CCNL1-223	ENST00000481173	PLS1	Q14651	629 aa		4.17	□□□□□ -1.74
CCNL1-223	ENST00000481173	DAZAP2	Q15038	168 aa	Predicted RBP	4.17	□□□□□ -1.74
CCNL1-223	ENST00000481173	AARS2	Q5JTZ9	985 aa	Known RBP	4.17	□□□□□ -1.74
CCNL1-223	ENST00000481173	PCID2	Q5JVF3	399 aa		4.17	□□□□□ -1.74
CCNL1-223	ENST00000481173	ANKRD16	Q6P6B7	361 aa		4.17	□□□□□ -1.74
CCNL1-223	ENST00000481173	PPP1R32	Q7Z5V6	425 aa		4.17	□□□□□ -1.74
CCNL1-223	ENST00000481173	KRT73	Q86Y46	540 aa		4.17	□□□□□ -1.74
CCNL1-223	ENST00000481173	SLC46A1	Q96NT5	459 aa		4.17	□□□□□ -1.74
CCNL1-223	ENST00000481173	TTYH3	Q9C0H2	523 aa		4.17	□□□□□ -1.74
CCNL1-223	ENST00000481173	DLL3	Q9NYJ7	618 aa		4.17	□□□□□ -1.74
CCNL1-223	ENST00000481173	ZDHHC8	Q9ULC8	765 aa		4.17	□□□□□ -1.74
CCNL1-223	ENST00000481173	PCDHA6	Q9UN73	950 aa		4.17	□□□□□ -1.74
CCNL1-223	ENST00000481173	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
CCNL1-223	ENST00000481173	CYP2D7	A0A087X1C5	515 aa		4.16	□□□□□ -1.74
CCNL1-223	ENST00000481173	CCKAR	P32238	428 aa		4.16	□□□□□ -1.74
CCNL1-223	ENST00000481173	LIPA	P38571	399 aa		4.16	□□□□□ -1.74
CCNL1-223	ENST00000481173	CLCN2	P51788	898 aa		4.16	□□□□□ -1.74
CCNL1-223	ENST00000481173	TCF15	Q12870	199 aa		4.16	□□□□□ -1.74
CCNL1-223	ENST00000481173	PTPRO	Q16827	1216 aa		4.16	□□□□□ -1.74
CCNL1-223	ENST00000481173	ZNF618	Q5T7W0	954 aa		4.16	□□□□□ -1.74
CCNL1-223	ENST00000481173	FAM160B1	Q5W0V3	765 aa		4.16	□□□□□ -1.74
CCNL1-223	ENST00000481173	MIS18BP1	Q6P0N0	1132 aa		4.16	□□□□□ -1.74
CCNL1-223	ENST00000481173	ZNF804A	Q7Z570	1209 aa		4.16	□□□□□ -1.74
CCNL1-223	ENST00000481173	CELF5	Q8N6W0	485 aa	Known RBP	4.16	□□□□□ -1.74
CCNL1-223	ENST00000481173	NANOGP1	Q8N7R0	232 aa		4.16	□□□□□ -1.74
CCNL1-223	ENST00000481173	NRAC	Q8N912	160 aa		4.16	□□□□□ -1.74
CCNL1-223	ENST00000481173	CHMP4C	Q96CF2	233 aa		4.16	□□□□□ -1.74
CCNL1-223	ENST00000481173	MVB12A	Q96EY5	273 aa		4.16	□□□□□ -1.74
CCNL1-223	ENST00000481173	GPATCH3	Q96I76	525 aa		4.16	□□□□□ -1.74
CCNL1-223	ENST00000481173	SIK2	Q9H0K1	926 aa		4.16	□□□□□ -1.74
CCNL1-223	ENST00000481173	ARMT1	Q9H993	441 aa		4.16	□□□□□ -1.74
CCNL1-223	ENST00000481173	AASDHPPT	Q9NRN7	309 aa		4.16	□□□□□ -1.74
CCNL1-223	ENST00000481173	TRNAU1AP	Q9NX07	287 aa	Known RBP	4.16	□□□□□ -1.74
CCNL1-223	ENST00000481173	IGKV2D-30	A0A075B6S6	120 aa		4.15	□□□□□ -1.75
CCNL1-223	ENST00000481173	MYMK	A6NI61	221 aa		4.15	□□□□□ -1.75
CCNL1-223	ENST00000481173	DCLK1	O15075	740 aa		4.15	□□□□□ -1.75
CCNL1-223	ENST00000481173	SOAT2	O75908	522 aa		4.15	□□□□□ -1.75
CCNL1-223	ENST00000481173	ALDH2	P05091	517 aa		4.15	□□□□□ -1.75
CCNL1-223	ENST00000481173	ENG	P17813	658 aa		4.15	□□□□□ -1.75
CCNL1-223	ENST00000481173	RGS19	P49795	217 aa		4.15	□□□□□ -1.75
CCNL1-223	ENST00000481173	NKX6-1	P78426	367 aa	Predicted RBP	4.15	□□□□□ -1.75
CCNL1-223	ENST00000481173	TRIP6	Q15654	476 aa	Known RBP	4.15	□□□□□ -1.75
CCNL1-223	ENST00000481173	TMEM240	Q5SV17	173 aa		4.15	□□□□□ -1.75
CCNL1-223	ENST00000481173	MAVS	Q7Z434	540 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms