RNA–Protein interactions for RNA: ENST00000479584.1

CDK5RAP2-211, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 3

Gene CDK5RAP2, Length 611 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-211	ENST00000479584	FRMD4B	Q9Y2L6	1034 aa		13.18	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	ZDHHC9	Q9Y397	364 aa		13.18	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	PTPRJ	Q12913	1337 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	NOTCH4	Q99466	2003 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584		A0A1W2PQ27	194 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584		A0A1W2PQ64	194 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584		A0A1W2PQD8	194 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	MYBPHL	A2RUH7	354 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	SLC38A8	A6NNN8	435 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	KLRC4	O43908	158 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	TACC1	O75410	805 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	CST3	P01034	146 aa	Predicted RBP	13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	SP9	P0CG40	484 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	P4HA1	P13674	534 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	HMGA1	P17096	107 aa	Known RBP	13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	TARS	P26639	723 aa	Known RBP	13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	ANXA13	P27216	316 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	GRIK1	P39086	918 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	NDUFA8	P51970	172 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	AMPD2	Q01433	879 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	CYP27A1	Q02318	531 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	ZNF528	Q3MIS6	628 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	FAM171B	Q6P995	826 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	VSTM1	Q6UX27	236 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	LIMS2	Q7Z4I7	341 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	MON1A	Q86VX9	555 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	OSTM1	Q86WC4	334 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	SLC9A9	Q8IVB4	645 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	MAB21L3	Q8N8X9	362 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	ATRIP	Q8WXE1	791 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	CEP295NL	Q96MC4	621 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	IER2	Q9BTL4	223 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	SLC46A2	Q9BY10	475 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	IL21	Q9HBE4	155 aa		13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	NXF1	Q9UBU9	619 aa	Known RBP	13.17	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	PTPRZ1	P23471	2315 aa	Predicted RBP	13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	PRR23A	A6NEV1	266 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	ATP2C2	O75185	946 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	STAU1	O95793	577 aa	Known RBP	13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	LMNA	P02545	664 aa	Known RBP	13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	F11	P03951	625 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	NR3C1	P04150	777 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	TRIM21	P19474	475 aa	Known RBP	13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	CCNE1	P24864	410 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	LMO2	P25791	158 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	RPL13	P26373	211 aa	Known RBP	13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	GPR15	P49685	360 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	PDE6C	P51160	858 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	PSMC1	P62191	440 aa	Known RBP	13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	CSTF1	Q05048	431 aa	Known RBP	13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	LRRC32	Q14392	662 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	SDHAF4	Q5VUM1	108 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	SCARA3	Q6AZY7	606 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	ASCL5	Q7RTU5	278 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	RALGPS2	Q86X27	583 aa	Predicted RBP	13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	KIAA0895	Q8NCT3	520 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	MYCBPAP	Q8TBZ2	947 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	PARD3B	Q8TEW8	1205 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	TMEM174	Q8WUU8	243 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	KBTBD7	Q8WVZ9	684 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	EXOC4	Q96A65	974 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	RSPRY1	Q96DX4	576 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	TRMT2B	Q96GJ1	504 aa	Known RBP	13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	MYRFL	Q96LU7	910 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	PKMYT1	Q99640	499 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	MKNK1	Q9BUB5	465 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	KIF9	Q9HAQ2	790 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	LMAN1L	Q9HAT1	526 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	TDP1	Q9NUW8	608 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	SCN1A	P35498	2009 aa		13.16	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	TCHH	Q07283	1943 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	TRAV19	A0A0A6YYK7	116 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	FAM237A	A0A1B0GTK4	181 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584		A8MXQ7	604 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	TRIM66	O15016	1216 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	KIN	O60870	393 aa	Known RBP	13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	NOL4	O94818	638 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	ZNF202	O95125	648 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	USP17L7	P0C7H9	530 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	PTPN1	P18031	435 aa	Known RBP	13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	BDNF	P23560	247 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	NRL	P54845	237 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	MYL6	P60660	151 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	NUCB2	P80303	420 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	NCOA4	Q13772	614 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	SGSM1	Q2NKQ1	1148 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	ZNF699	Q32M78	642 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	ITPRIPL2	Q3MIP1	535 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	ZNF667	Q5HYK9	610 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	CEP135	Q66GS9	1140 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	TXNDC8	Q6A555	127 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	KRBA2	Q6ZNG9	492 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	ZNF516	Q92618	1163 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	MYLPF	Q96A32	169 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	SPATA17	Q96L03	361 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	MRPL45	Q9BRJ2	306 aa	Known RBP	13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	TRPC7	Q9HCX4	862 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	GKN1	Q9NS71	199 aa		13.15	□□□□□ -0.3
CDK5RAP2-211	ENST00000479584	DMAC2	Q9NW81	257 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms