RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 AXIN1O15169 862 aa14.29□□□□□ -0.12
ABCF1-206ENST00000479542 CD2BP2O95400 341 aaKnown RBP14.29□□□□□ -0.12
ABCF1-206ENST00000479542 USP17L7P0C7H9 530 aa14.29□□□□□ -0.12
ABCF1-206ENST00000479542 PCSK1P29120 753 aa14.29□□□□□ -0.12
ABCF1-206ENST00000479542 PMLP29590 882 aa14.29□□□□□ -0.12
ABCF1-206ENST00000479542 GJA4P35212 333 aa14.29□□□□□ -0.12
ABCF1-206ENST00000479542 GRIN1Q05586 938 aa14.29□□□□□ -0.12
ABCF1-206ENST00000479542 NR1H3Q13133 447 aa14.29□□□□□ -0.12
ABCF1-206ENST00000479542 ZNF77Q15935 545 aa14.29□□□□□ -0.12
ABCF1-206ENST00000479542 AASDHQ4L235 1098 aaPredicted RBP14.29□□□□□ -0.12
ABCF1-206ENST00000479542 TXNDC8Q6A555 127 aa14.29□□□□□ -0.12
ABCF1-206ENST00000479542 PKN3Q6P5Z2 889 aa14.29□□□□□ -0.12
ABCF1-206ENST00000479542 CPA6Q8N4T0 437 aa14.29□□□□□ -0.12
ABCF1-206ENST00000479542 C1orf127Q8N9H9 656 aa14.29□□□□□ -0.12
ABCF1-206ENST00000479542 FSIP1Q8NA03 581 aa14.29□□□□□ -0.12
ABCF1-206ENST00000479542 RASSF8Q8NHQ8 419 aa14.29□□□□□ -0.12
ABCF1-206ENST00000479542 ATP2A3Q93084 1043 aa14.29□□□□□ -0.12
ABCF1-206ENST00000479542 ACDQ96AP0 544 aa14.29□□□□□ -0.12
ABCF1-206ENST00000479542 SPATA17Q96L03 361 aa14.29□□□□□ -0.12
ABCF1-206ENST00000479542 LSM14BQ9BX40 385 aaKnown RBP14.29□□□□□ -0.12
ABCF1-206ENST00000479542 ECT2Q9H8V3 914 aa14.29□□□□□ -0.12
ABCF1-206ENST00000479542 DDX43Q9NXZ2 648 aaKnown RBP14.29□□□□□ -0.12
ABCF1-206ENST00000479542 ANGPTL2Q9UKU9 493 aa14.29□□□□□ -0.12
ABCF1-206ENST00000479542 L1RE1Q9UN81 338 aa14.29□□□□□ -0.12
ABCF1-206ENST00000479542 SRPRBQ9Y5M8 271 aaKnown RBP14.29□□□□□ -0.12
ABCF1-206ENST00000479542 FRMD3A2A2Y4 597 aa14.28□□□□□ -0.12
ABCF1-206ENST00000479542 RNF40O75150 1001 aa14.28□□□□□ -0.12
ABCF1-206ENST00000479542 TADA3O75528 432 aa14.28□□□□□ -0.12
ABCF1-206ENST00000479542 KRT37O76014 449 aa14.28□□□□□ -0.12
ABCF1-206ENST00000479542 RHOBTB1O94844 696 aa14.28□□□□□ -0.12
ABCF1-206ENST00000479542 CCDC192P0DO97 292 aa14.28□□□□□ -0.12
ABCF1-206ENST00000479542 PPP3CCP48454 512 aa14.28□□□□□ -0.12
ABCF1-206ENST00000479542 RBP5P82980 135 aa14.28□□□□□ -0.12
ABCF1-206ENST00000479542 TCHHQ07283 1943 aa14.28□□□□□ -0.12
ABCF1-206ENST00000479542 USP4Q13107 963 aa14.28□□□□□ -0.12
ABCF1-206ENST00000479542 MTF1Q14872 753 aa14.28□□□□□ -0.12
ABCF1-206ENST00000479542 ST3GAL2Q16842 350 aa14.28□□□□□ -0.12
ABCF1-206ENST00000479542 PLK5Q496M5 336 aa14.28□□□□□ -0.12
ABCF1-206ENST00000479542 STPG1Q5TH74 334 aa14.28□□□□□ -0.12
ABCF1-206ENST00000479542 VSTM1Q6UX27 236 aa14.28□□□□□ -0.12
ABCF1-206ENST00000479542 SV2BQ7L1I2 683 aa14.28□□□□□ -0.12
ABCF1-206ENST00000479542 KBTBD6Q86V97 674 aa14.28□□□□□ -0.12
ABCF1-206ENST00000479542 SFR1Q86XK3 245 aa14.28□□□□□ -0.12
ABCF1-206ENST00000479542 PIAS4Q8N2W9 510 aaPredicted RBP14.28□□□□□ -0.12
ABCF1-206ENST00000479542 CD101Q93033 1021 aa14.28□□□□□ -0.12
ABCF1-206ENST00000479542 PI4K2AQ9BTU6 479 aa14.28□□□□□ -0.12
ABCF1-206ENST00000479542 SMG9Q9H0W8 520 aaKnown RBP14.28□□□□□ -0.12
ABCF1-206ENST00000479542 MRPL44Q9H9J2 332 aaKnown RBP14.28□□□□□ -0.12
ABCF1-206ENST00000479542 FBRSL1Q9HCM7 1045 aaKnown RBP14.28□□□□□ -0.12
ABCF1-206ENST00000479542 EHD2Q9NZN4 543 aa14.28□□□□□ -0.12
ABCF1-206ENST00000479542 GCNT4Q9P109 453 aa14.28□□□□□ -0.12
ABCF1-206ENST00000479542 ARHGAP26Q9UNA1 814 aa14.28□□□□□ -0.12
ABCF1-206ENST00000479542 AGAP1Q9UPQ3 857 aa14.28□□□□□ -0.12
ABCF1-206ENST00000479542 SDK1Q7Z5N4 2213 aa14.27□□□□□ -0.12
ABCF1-206ENST00000479542 TRAV19A0A0A6YYK7 116 aa14.27□□□□□ -0.13
ABCF1-206ENST00000479542 APBB3O95704 486 aa14.27□□□□□ -0.13
ABCF1-206ENST00000479542 EGFP01133 1207 aa14.27□□□□□ -0.13
ABCF1-206ENST00000479542 ITGB3P05106 788 aa14.27□□□□□ -0.13
ABCF1-206ENST00000479542 POLR2BP30876 1174 aaKnown RBP14.27□□□□□ -0.13
ABCF1-206ENST00000479542 SURF1Q15526 300 aa14.27□□□□□ -0.13
ABCF1-206ENST00000479542 MAPRE1Q15691 268 aaKnown RBP14.27□□□□□ -0.13
ABCF1-206ENST00000479542 ELF2Q15723 593 aa14.27□□□□□ -0.13
ABCF1-206ENST00000479542 EML3Q32P44 896 aa14.27□□□□□ -0.13
ABCF1-206ENST00000479542 RRAGBQ5VZM2 374 aa14.27□□□□□ -0.13
ABCF1-206ENST00000479542 TRIM68Q6AZZ1 485 aa14.27□□□□□ -0.13
ABCF1-206ENST00000479542 C4orf50Q6ZRC1 276 aa14.27□□□□□ -0.13
ABCF1-206ENST00000479542 RIN3Q8TB24 985 aa14.27□□□□□ -0.13
ABCF1-206ENST00000479542 EPSTI1Q96J88 318 aa14.27□□□□□ -0.13
ABCF1-206ENST00000479542 FAM213AQ9BRX8 229 aa14.27□□□□□ -0.13
ABCF1-206ENST00000479542 DUSP15Q9H1R2 295 aaPredicted RBP14.27□□□□□ -0.13
ABCF1-206ENST00000479542 DUS2Q9NX74 493 aaKnown RBP14.27□□□□□ -0.13
ABCF1-206ENST00000479542 ZNF638Q14966 1978 aaKnown RBP14.27□□□□□ -0.13
ABCF1-206ENST00000479542 MYMKA6NI61 221 aa14.26□□□□□ -0.13
ABCF1-206ENST00000479542 ARSAP15289 507 aa14.26□□□□□ -0.13
ABCF1-206ENST00000479542 PDCP20941 246 aa14.26□□□□□ -0.13
ABCF1-206ENST00000479542 CYP2F1P24903 491 aa14.26□□□□□ -0.13
ABCF1-206ENST00000479542 MPLP40238 635 aa14.26□□□□□ -0.13
ABCF1-206ENST00000479542 TFAMQ00059 246 aaKnown RBP14.26□□□□□ -0.13
ABCF1-206ENST00000479542 KCNA1Q09470 495 aa14.26□□□□□ -0.13
ABCF1-206ENST00000479542 MYO1EQ12965 1108 aa14.26□□□□□ -0.13
ABCF1-206ENST00000479542 SF3A2Q15428 464 aaKnown RBP14.26□□□□□ -0.13
ABCF1-206ENST00000479542 DDR2Q16832 855 aa14.26□□□□□ -0.13
ABCF1-206ENST00000479542 HSF5Q4G112 596 aaPredicted RBP14.26□□□□□ -0.13
ABCF1-206ENST00000479542 SPATA2LQ8IUW3 424 aaPredicted RBP14.26□□□□□ -0.13
ABCF1-206ENST00000479542 CSGALNACT2Q8N6G5 542 aa14.26□□□□□ -0.13
ABCF1-206ENST00000479542 TTLL2Q9BWV7 592 aa14.26□□□□□ -0.13
ABCF1-206ENST00000479542 RBAKQ9NYW8 714 aaPredicted RBP14.26□□□□□ -0.13
ABCF1-206ENST00000479542 GTF3C4Q9UKN8 822 aa14.26□□□□□ -0.13
ABCF1-206ENST00000479542 CDH9Q9ULB4 789 aa14.26□□□□□ -0.13
ABCF1-206ENST00000479542 MAGED2Q9UNF1 606 aaPredicted RBP14.26□□□□□ -0.13
ABCF1-206ENST00000479542 OBSL1O75147 1896 aa14.26□□□□□ -0.13
ABCF1-206ENST00000479542 MAP1BP46821 2468 aaKnown RBP14.26□□□□□ -0.13
ABCF1-206ENST00000479542 CHD8Q9HCK8 2581 aa14.26□□□□□ -0.13
ABCF1-206ENST00000479542 ZFHX4Q86UP3 3567 aa14.25□□□□□ -0.13
ABCF1-206ENST00000479542 A0A0A0MRY4 1105 aa14.25□□□□□ -0.13
ABCF1-206ENST00000479542 BCLAF3A2AJT9 711 aaKnown RBP14.25□□□□□ -0.13
ABCF1-206ENST00000479542 HDCP19113 662 aa14.25□□□□□ -0.13
ABCF1-206ENST00000479542 HOXC13P31276 330 aa14.25□□□□□ -0.13
ABCF1-206ENST00000479542 TXLNAP40222 546 aa14.25□□□□□ -0.13
ABCF1-206ENST00000479542 EIF2DP41214 584 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms