RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 TSG101Q99816 390 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 GDF15Q99988 308 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 CCDC113Q9H0I3 377 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 MINDY3Q9H8M7 445 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 SLC39A2Q9NP94 309 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 UBN1Q9NPG3 1134 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 KRT82Q9NSB4 513 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 CACNA2D2Q9NY47 1150 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 CGNQ9P2M7 1197 aaKnown RBP6.71□□□□□ -1.34
SF3B1-209ENST00000479532 ANKFY1Q9P2R3 1169 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 TNFSF13BQ9Y275 285 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 PCDHA5Q9Y5H7 936 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 SLC4A7Q9Y6M7 1214 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 ADGRA3Q8IWK6 1321 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 A0A1B0GUA9 196 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 A0A1W2PPC1 479 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 ENPP3O14638 875 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 PSMA7O14818 248 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 KIAA0391O15091 583 aaKnown RBP6.7□□□□□ -1.34
SF3B1-209ENST00000479532 DDX3YO15523 660 aaKnown RBP6.7□□□□□ -1.34
SF3B1-209ENST00000479532 CALUO43852 315 aaPredicted RBP6.7□□□□□ -1.34
SF3B1-209ENST00000479532 KLRC4O43908 158 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 ADAM11O75078 769 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 PRPF6O94906 941 aaKnown RBP6.7□□□□□ -1.34
SF3B1-209ENST00000479532 NPTXRO95502 500 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 EOMESO95936 686 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 LDHAP00338 332 aaKnown RBP6.7□□□□□ -1.34
SF3B1-209ENST00000479532 PIGRP01833 764 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 MCF2P10911 925 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 ITGA4P13612 1032 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 ETFBP38117 255 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 ZNF165P49910 485 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 YARSP54577 528 aaKnown RBP6.7□□□□□ -1.34
SF3B1-209ENST00000479532 WDR5P61964 334 aaKnown RBP6.7□□□□□ -1.34
SF3B1-209ENST00000479532 NOLC1Q14978 699 aaKnown RBP eCLIP6.7□□□□□ -1.344e-10■■■■□ 19.7
SF3B1-209ENST00000479532 UVSSAQ2YD98 709 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 ZC2HC1CQ53FD0 456 aaPredicted RBP6.7□□□□□ -1.34
SF3B1-209ENST00000479532 WIPI1Q5MNZ9 446 aaPredicted RBP6.7□□□□□ -1.34
SF3B1-209ENST00000479532 FBXW10Q5XX13 1052 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 ARMCX5Q6P1M9 558 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 NELFCDQ8IXH7 590 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 TDHQ8IZJ6 230 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 RNF169Q8NCN4 708 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 ZNF507Q8TCN5 953 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 URGCPQ8TCY9 931 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 GPT2Q8TD30 523 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 POMGNT1Q8WZA1 660 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 RPS6KC1Q96S38 1066 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 FIZ1Q96SL8 496 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 ACO2Q99798 780 aaKnown RBP6.7□□□□□ -1.34
SF3B1-209ENST00000479532 TARS2Q9BW92 718 aaKnown RBP6.7□□□□□ -1.34
SF3B1-209ENST00000479532 GBP3Q9H0R5 595 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 PDZD7Q9H5P4 517 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 ELAC1Q9H777 363 aaKnown RBP6.7□□□□□ -1.34
SF3B1-209ENST00000479532 FAM105AQ9NUU6 356 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 TYW1Q9NV66 732 aaKnown RBP6.7□□□□□ -1.34
SF3B1-209ENST00000479532 TMEM161AQ9NX61 479 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 MAN1B1Q9UKM7 699 aa6.7□□□□□ -1.34
SF3B1-209ENST00000479532 A0A0U1RQF3 1178 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 LOC100289279A0A1B0GTE1 492 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.69□□□□□ -1.34
SF3B1-209ENST00000479532 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.69□□□□□ -1.34
SF3B1-209ENST00000479532 BICDL2A1A5D9 508 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 C9IYK1 514 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 B4GALT5O43286 388 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 CLSTN1O94985 981 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 FGFR1OPO95684 399 aaKnown RBP6.69□□□□□ -1.34
SF3B1-209ENST00000479532 HARSP12081 509 aaKnown RBP6.69□□□□□ -1.34
SF3B1-209ENST00000479532 ATP2A2P16615 1042 aaKnown RBP6.69□□□□□ -1.34
SF3B1-209ENST00000479532 RPL13P26373 211 aaKnown RBP6.69□□□□□ -1.34
SF3B1-209ENST00000479532 HOXA11P31270 313 aaPredicted RBP6.69□□□□□ -1.34
SF3B1-209ENST00000479532 CD68P34810 354 aaPredicted RBP6.69□□□□□ -1.34
SF3B1-209ENST00000479532 CASP5P51878 434 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 CLCQ05315 142 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 MCL1Q07820 350 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 STK4Q13043 487 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 INPP5AQ14642 412 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 GPNMBQ14956 572 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 SHHQ15465 462 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 RAB30Q15771 203 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 KNOP1Q1ED39 458 aaKnown RBP6.69□□□□□ -1.34
SF3B1-209ENST00000479532 BMT2Q1RMZ1 405 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 COBLL1Q53SF7 1204 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 LCE5AQ5TCM9 118 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 NT5DC1Q5TFE4 455 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 CAVIN1Q6NZI2 390 aaKnown RBP6.69□□□□□ -1.34
SF3B1-209ENST00000479532 GLB1LQ6UWU2 654 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 EPM2AIP1Q7L775 607 aaPredicted RBP6.69□□□□□ -1.34
SF3B1-209ENST00000479532 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.69□□□□□ -1.34
SF3B1-209ENST00000479532 GAS2L3Q86XJ1 694 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 ECHDC2Q86YB7 292 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 GUF1Q8N442 669 aaKnown RBP6.69□□□□□ -1.34
SF3B1-209ENST00000479532 KIAA0895Q8NCT3 520 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 MNS1Q8NEH6 495 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 TET1Q8NFU7 2136 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 SPATA20Q8TB22 786 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 NOC3LQ8WTT2 800 aaKnown RBP6.69□□□□□ -1.34
SF3B1-209ENST00000479532 SCFD1Q8WVM8 642 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 HPS3Q969F9 1004 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 WDR89Q96FK6 387 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms