RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 EIF2AQ9BY44 585 aaKnown RBP11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 BTBD7Q9P203 1132 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 ADGRA3Q8IWK6 1321 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 PDGFRBP09619 1106 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 ARSEP51690 589 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 GEMIN4P57678 1058 aaKnown RBP11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 ARPC4P59998 168 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 MKRN3Q13064 507 aaKnown RBP11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 DGKZQ13574 1117 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 CYLC2Q14093 348 aaPredicted RBP11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 R3HDM1Q15032 1099 aaKnown RBP11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 DACT2Q5SW24 774 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 ZNF362Q5T0B9 420 aaPredicted RBP11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 DQX1Q8TE96 717 aaKnown RBP11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 MAML1Q92585 1016 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 SLCO2A1Q92959 643 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 NMD3Q96D46 503 aaKnown RBP11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 DNAJC1Q96KC8 554 aaKnown RBP11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 TUBGCP5Q96RT8 1024 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 TBC1D10AQ9BXI6 508 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 UBN1Q9NPG3 1134 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 KMT5AQ9NQR1 393 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 C1orf112Q9NSG2 853 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 TDRKHQ9Y2W6 561 aaKnown RBP11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 TESPA1A2RU30 521 aaPredicted RBP11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 MAPK13O15264 365 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 TLR3O15455 904 aaKnown RBP11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 DSG3P32926 999 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 HALP42357 657 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 MTMR1Q13613 665 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 SPARCL1Q14515 664 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 TAF1BQ53T94 588 aaPredicted RBP11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 SYCP2LQ5T4T6 812 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 TMEM270Q6UE05 265 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 B3GNT9Q6UX72 402 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 MARK2Q7KZI7 788 aaKnown RBP11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 TRABD2AQ86V40 505 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 CHURC1Q8WUH1 139 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 ATP6V0A1Q93050 837 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 RIT2Q99578 217 aa11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 SAE1Q9UBE0 346 aaPredicted RBP11.59□□□□□ -0.55
LRRFIP1-211ENST00000478958 NRAPQ86VF7 1730 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 BIRC5O15392 142 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 DHX15O43143 795 aaKnown RBP11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 FGFR1P11362 822 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 UNGP13051 313 aaPredicted RBP11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 MAN1A1P33908 653 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 ACOT2P49753 483 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 CDK7P50613 346 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 GPC3P51654 580 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 RPL7AP62424 266 aaKnown RBP11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 DYNLT1P63172 113 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 GAD2Q05329 585 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 DMP1Q13316 513 aaPredicted RBP11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 AOC3Q16853 763 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 C14orf80Q86SX3 495 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 TMEM161BQ8NDZ6 487 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 SREK1Q8WXA9 508 aaKnown RBP11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 BSNDQ8WZ55 320 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 CFAP57Q96MR6 1250 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 LGALS13Q9UHV8 139 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 ASTN2O75129 1339 aaPredicted RBP11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 MYPNQ86TC9 1320 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 A0A0G2JND7 137 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 PROSCO94903 275 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 KRT4P19013 534 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 GCAP28676 217 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 CAV1Q03135 178 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 PDIA2Q13087 525 aaKnown RBP11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 KLF1Q13351 362 aaPredicted RBP11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 EFTUD2Q15029 972 aaKnown RBP eCLIP11.58□□□□□ -0.562e-10■■□□□ 13.5
LRRFIP1-211ENST00000478958 SEPT7Q16181 437 aaKnown RBP11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 INAQ16352 499 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 SLC39A4Q6P5W5 647 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 LVRNQ6Q4G3 990 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 MTDHQ86UE4 582 aaKnown RBP11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 RHOT1Q8IXI2 618 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 ST13P4Q8IZP2 240 aaPredicted RBP11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 SH3TC2Q8TF17 1288 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 TMEM121Q9BTD3 319 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 IL1RAPL1Q9NZN1 696 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 TSC22D4Q9Y3Q8 395 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 N6AMT1Q9Y5N5 214 aa11.58□□□□□ -0.56
LRRFIP1-211ENST00000478958 MAP3K7O43318 606 aa11.57□□□□□ -0.56
LRRFIP1-211ENST00000478958 ATP5HO75947 161 aa11.57□□□□□ -0.56
LRRFIP1-211ENST00000478958 GSTT2P0CG29 244 aa11.57□□□□□ -0.56
LRRFIP1-211ENST00000478958 GSTT2BP0CG30 244 aa11.57□□□□□ -0.56
LRRFIP1-211ENST00000478958 DMPKQ09013 629 aa11.57□□□□□ -0.56
LRRFIP1-211ENST00000478958 CCNG2Q16589 344 aa11.57□□□□□ -0.56
LRRFIP1-211ENST00000478958 TKFCQ3LXA3 575 aa11.57□□□□□ -0.56
LRRFIP1-211ENST00000478958 ZNF394Q53GI3 561 aa11.57□□□□□ -0.56
LRRFIP1-211ENST00000478958 RFX8Q6ZV50 586 aa11.57□□□□□ -0.56
LRRFIP1-211ENST00000478958 SYDE1Q6ZW31 735 aaPredicted RBP11.57□□□□□ -0.56
LRRFIP1-211ENST00000478958 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.57□□□□□ -0.56
LRRFIP1-211ENST00000478958 IRGQQ8WZA9 623 aa11.57□□□□□ -0.56
LRRFIP1-211ENST00000478958 LRMDAQ9H2I8 198 aa11.57□□□□□ -0.56
LRRFIP1-211ENST00000478958 RABL2AQ9UBK7 228 aaPredicted RBP11.57□□□□□ -0.56
LRRFIP1-211ENST00000478958 HESX1Q9UBX0 185 aa11.57□□□□□ -0.56
LRRFIP1-211ENST00000478958 TMX2Q9Y320 296 aa11.57□□□□□ -0.56
LRRFIP1-211ENST00000478958 BTAF1O14981 1849 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms