RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 NCKAP1LP55160 1127 aa15.65■□□□□ 0.1
USP11-207ENST00000478596 PSMD2Q13200 908 aa15.65■□□□□ 0.1
USP11-207ENST00000478596 MAPK6Q16659 721 aa15.65■□□□□ 0.1
USP11-207ENST00000478596 FSTL4Q6MZW2 842 aa15.65■□□□□ 0.1
USP11-207ENST00000478596 ARID3BQ8IVW6 561 aaPredicted RBP15.65■□□□□ 0.1
USP11-207ENST00000478596 SPIRE2Q8WWL2 714 aa15.65■□□□□ 0.1
USP11-207ENST00000478596 OLFML3Q9NRN5 406 aa15.65■□□□□ 0.1
USP11-207ENST00000478596 GDAQ9Y2T3 454 aa15.65■□□□□ 0.1
USP11-207ENST00000478596 EML5Q05BV3 1969 aa15.65■□□□□ 0.1
USP11-207ENST00000478596 UNC79Q9P2D8 2635 aa15.64■□□□□ 0.1
USP11-207ENST00000478596 CFAP46Q8IYW2 2715 aa15.64■□□□□ 0.09
USP11-207ENST00000478596 SYCE3A1L190 88 aa15.64■□□□□ 0.09
USP11-207ENST00000478596 K7ERI5 159 aa15.64■□□□□ 0.09
USP11-207ENST00000478596 TK2O00142 265 aa15.64■□□□□ 0.09
USP11-207ENST00000478596 TRDMT1O14717 391 aaKnown RBP15.64■□□□□ 0.09
USP11-207ENST00000478596 RHOBTB3O94955 611 aa15.64■□□□□ 0.09
USP11-207ENST00000478596 TNK2Q07912 1038 aa15.64■□□□□ 0.09
USP11-207ENST00000478596 TWF1Q12792 350 aa15.64■□□□□ 0.09
USP11-207ENST00000478596 STX1AQ16623 288 aa15.64■□□□□ 0.09
USP11-207ENST00000478596 ITPRIPL2Q3MIP1 535 aa15.64■□□□□ 0.09
USP11-207ENST00000478596 CDCA2Q69YH5 1023 aaPredicted RBP15.64■□□□□ 0.09
USP11-207ENST00000478596 SYT13Q7L8C5 426 aa15.64■□□□□ 0.09
USP11-207ENST00000478596 NELFCDQ8IXH7 590 aa15.64■□□□□ 0.09
USP11-207ENST00000478596 SMYD4Q8IYR2 804 aaPredicted RBP15.64■□□□□ 0.09
USP11-207ENST00000478596 TRIML1Q8N9V2 468 aa15.64■□□□□ 0.09
USP11-207ENST00000478596 HVCN1Q96D96 273 aa15.64■□□□□ 0.09
USP11-207ENST00000478596 CXCL16Q9H2A7 254 aa15.64■□□□□ 0.09
USP11-207ENST00000478596 PRMT7Q9NVM4 692 aaPredicted RBP15.64■□□□□ 0.09
USP11-207ENST00000478596 POLR3BQ9NW08 1133 aaPredicted RBP15.64■□□□□ 0.09
USP11-207ENST00000478596 DACH1Q9UI36 760 aa15.64■□□□□ 0.09
USP11-207ENST00000478596 EXOC7Q9UPT5 735 aa15.64■□□□□ 0.09
USP11-207ENST00000478596 PCDHB13Q9Y5F0 798 aa15.64■□□□□ 0.09
USP11-207ENST00000478596 UBE4BO95155 1302 aa15.64■□□□□ 0.09
USP11-207ENST00000478596 ASCC3Q8N3C0 2202 aaKnown RBP15.63■□□□□ 0.09
USP11-207ENST00000478596 PCNX2A6NKB5 2137 aa15.63■□□□□ 0.09
USP11-207ENST00000478596 HNRNPDLO14979 420 aaKnown RBP15.63■□□□□ 0.09
USP11-207ENST00000478596 RNF40O75150 1001 aa15.63■□□□□ 0.09
USP11-207ENST00000478596 C1QL1O75973 258 aa15.63■□□□□ 0.09
USP11-207ENST00000478596 RECQL4O94761 1208 aa15.63■□□□□ 0.09
USP11-207ENST00000478596 MAPTP10636 758 aaKnown RBP15.63■□□□□ 0.09
USP11-207ENST00000478596 PLA2G2AP14555 144 aa15.63■□□□□ 0.09
USP11-207ENST00000478596 SCP2P22307 547 aa15.63■□□□□ 0.09
USP11-207ENST00000478596 LIG4P49917 911 aa15.63■□□□□ 0.09
USP11-207ENST00000478596 CLCNKBP51801 687 aa15.63■□□□□ 0.09
USP11-207ENST00000478596 UPP1Q16831 310 aa15.63■□□□□ 0.09
USP11-207ENST00000478596 ZC2HC1CQ53FD0 456 aaPredicted RBP15.63■□□□□ 0.09
USP11-207ENST00000478596 ZNF658Q5TYW1 1059 aaPredicted RBP15.63■□□□□ 0.09
USP11-207ENST00000478596 KLHL10Q6JEL2 608 aa15.63■□□□□ 0.09
USP11-207ENST00000478596 CCNI2Q6ZMN8 369 aaPredicted RBP15.63■□□□□ 0.09
USP11-207ENST00000478596 UROC1Q96N76 676 aa15.63■□□□□ 0.09
USP11-207ENST00000478596 ACCSQ96QU6 501 aa15.63■□□□□ 0.09
USP11-207ENST00000478596 UBL7Q96S82 380 aaPredicted RBP15.63■□□□□ 0.09
USP11-207ENST00000478596 LRRC3Q9BY71 257 aa15.63■□□□□ 0.09
USP11-207ENST00000478596 ARHGAP28Q9P2N2 729 aa15.63■□□□□ 0.09
USP11-207ENST00000478596 MAPK8IP1Q9UQF2 711 aa15.63■□□□□ 0.09
USP11-207ENST00000478596 RAXQ9Y2V3 346 aa15.63■□□□□ 0.09
USP11-207ENST00000478596 APC2O95996 2303 aa15.63■□□□□ 0.09
USP11-207ENST00000478596 A0A1W2PRU2 124 aa15.62■□□□□ 0.09
USP11-207ENST00000478596 I3L4J1 428 aa15.62■□□□□ 0.09
USP11-207ENST00000478596 TULP1O00294 542 aaPredicted RBP15.62■□□□□ 0.09
USP11-207ENST00000478596 DPYSL4O14531 572 aa15.62■□□□□ 0.09
USP11-207ENST00000478596 PSMA7O14818 248 aa15.62■□□□□ 0.09
USP11-207ENST00000478596 EIF3DO15371 548 aaKnown RBP eCLIP15.62■□□□□ 0.09
USP11-207ENST00000478596 PRPF6O94906 941 aaKnown RBP15.62■□□□□ 0.09
USP11-207ENST00000478596 HARSP12081 509 aaKnown RBP15.62■□□□□ 0.09
USP11-207ENST00000478596 MAPK8P45983 427 aa15.62■□□□□ 0.09
USP11-207ENST00000478596 CASP5P51878 434 aa15.62■□□□□ 0.09
USP11-207ENST00000478596 ARPP19P56211 112 aa15.62■□□□□ 0.09
USP11-207ENST00000478596 PRPF4BQ13523 1007 aaKnown RBP15.62■□□□□ 0.09
USP11-207ENST00000478596 HNRNPDQ14103 355 aaKnown RBP15.62■□□□□ 0.09
USP11-207ENST00000478596 ZSCAN23Q3MJ62 389 aa15.62■□□□□ 0.09
USP11-207ENST00000478596 USP39Q53GS9 565 aaKnown RBP15.62■□□□□ 0.09
USP11-207ENST00000478596 TRIM61Q5EBN2 209 aa15.62■□□□□ 0.09
USP11-207ENST00000478596 TMC8Q8IU68 726 aa15.62■□□□□ 0.09
USP11-207ENST00000478596 C3orf58Q8NDZ4 430 aa15.62■□□□□ 0.09
USP11-207ENST00000478596 TMEM161BQ8NDZ6 487 aa15.62■□□□□ 0.09
USP11-207ENST00000478596 NOC3LQ8WTT2 800 aaKnown RBP15.62■□□□□ 0.09
USP11-207ENST00000478596 NUSAP1Q9BXS6 441 aaKnown RBP15.62■□□□□ 0.09
USP11-207ENST00000478596 MRPL4Q9BYD3 311 aaKnown RBP15.62■□□□□ 0.09
USP11-207ENST00000478596 AFF4Q9UHB7 1163 aaKnown RBP15.62■□□□□ 0.09
USP11-207ENST00000478596 CTNND2Q9UQB3 1225 aa15.62■□□□□ 0.09
USP11-207ENST00000478596 ACACAQ13085 2346 aa15.62■□□□□ 0.09
USP11-207ENST00000478596 ZNF462Q96JM2 2506 aa15.61■□□□□ 0.09
USP11-207ENST00000478596 H7C4K7 107 aa15.61■□□□□ 0.09
USP11-207ENST00000478596 PRB1P04280 392 aa15.61■□□□□ 0.09
USP11-207ENST00000478596 ENGP17813 658 aa15.61■□□□□ 0.09
USP11-207ENST00000478596 WEE1P30291 646 aa15.61■□□□□ 0.09
USP11-207ENST00000478596 PPP1R2P41236 205 aa15.61■□□□□ 0.09
USP11-207ENST00000478596 BRCC3P46736 316 aa15.61■□□□□ 0.09
USP11-207ENST00000478596 FAM193AP78312 1265 aa15.61■□□□□ 0.09
USP11-207ENST00000478596 STK4Q13043 487 aa15.61■□□□□ 0.09
USP11-207ENST00000478596 MRPL58Q14197 206 aaKnown RBP15.61■□□□□ 0.09
USP11-207ENST00000478596 FBXO43Q4G163 708 aa15.61■□□□□ 0.09
USP11-207ENST00000478596 NT5DC1Q5TFE4 455 aa15.61■□□□□ 0.09
USP11-207ENST00000478596 PPP4R3CPQ6ZMV5 832 aa15.61■□□□□ 0.09
USP11-207ENST00000478596 HS2ST1Q7LGA3 356 aa15.61■□□□□ 0.09
USP11-207ENST00000478596 APBB1IPQ7Z5R6 666 aaPredicted RBP15.61■□□□□ 0.09
USP11-207ENST00000478596 KIAA0895Q8NCT3 520 aa15.61■□□□□ 0.09
USP11-207ENST00000478596 BPIFB1Q8TDL5 484 aa15.61■□□□□ 0.09
USP11-207ENST00000478596 PIGKQ92643 395 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms