RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 SRGNP10124 158 aa5□□□□□ -1.61
CDC42BPA-212ENST00000478573 MTHFD1P11586 935 aaKnown RBP5□□□□□ -1.61
CDC42BPA-212ENST00000478573 GATA3P23771 443 aa5□□□□□ -1.61
CDC42BPA-212ENST00000478573 GRIA3P42263 894 aa5□□□□□ -1.61
CDC42BPA-212ENST00000478573 TM4SF4P48230 202 aa5□□□□□ -1.61
CDC42BPA-212ENST00000478573 NEK3P51956 506 aa5□□□□□ -1.61
CDC42BPA-212ENST00000478573 OS9Q13438 667 aaPredicted RBP5□□□□□ -1.61
CDC42BPA-212ENST00000478573 CNN3Q15417 329 aaKnown RBP5□□□□□ -1.61
CDC42BPA-212ENST00000478573 RNF220Q5VTB9 566 aa5□□□□□ -1.61
CDC42BPA-212ENST00000478573 HEATR3Q7Z4Q2 680 aa5□□□□□ -1.61
CDC42BPA-212ENST00000478573 MYCBPAPQ8TBZ2 947 aa5□□□□□ -1.61
CDC42BPA-212ENST00000478573 MORC4Q8TE76 937 aa5□□□□□ -1.61
CDC42BPA-212ENST00000478573 LRTOMTQ8WZ04 291 aa5□□□□□ -1.61
CDC42BPA-212ENST00000478573 DDB2Q92466 427 aa5□□□□□ -1.61
CDC42BPA-212ENST00000478573 MTFMTQ96DP5 389 aaKnown RBP5□□□□□ -1.61
CDC42BPA-212ENST00000478573 IMPG2Q9BZV3 1241 aa5□□□□□ -1.61
CDC42BPA-212ENST00000478573 LMBRD1Q9NUN5 540 aa5□□□□□ -1.61
CDC42BPA-212ENST00000478573 PHTF1Q9UMS5 762 aa5□□□□□ -1.61
CDC42BPA-212ENST00000478573 ST3GAL5Q9UNP4 418 aa5□□□□□ -1.61
CDC42BPA-212ENST00000478573 ENTPD2Q9Y5L3 495 aa5□□□□□ -1.61
CDC42BPA-212ENST00000478573 LRRC14BA6NHZ5 514 aa4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 NT5C1B-RDH14C9J2C7 533 aa4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 EIF3JO75822 258 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 CD1AP06126 327 aa4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 TYRP14679 529 aa4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 MALP21145 153 aa4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 PEX2P28328 305 aa4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 MC2RQ01718 297 aa4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 MORC3Q14149 939 aa4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 FGL2Q14314 439 aa4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 POLD3Q15054 466 aaPredicted RBP4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 NBPF8Q3BBV2 869 aa4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 LONRF3Q496Y0 759 aa4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 KHDC1Q4VXA5 237 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 PABPC1LQ4VXU2 614 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 KIAA0895LQ68EN5 471 aa4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 B3GALNT2Q8NCR0 500 aa4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 SNX19Q92543 992 aa4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 GJA10Q969M2 543 aa4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 SARAFQ96BY9 339 aa4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 SLC35A4Q96G79 324 aa4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 KLHL32Q96NJ5 620 aa4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 ELAC2Q9BQ52 826 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 NAA15Q9BXJ9 866 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 C22orf23Q9BZE7 217 aa4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 WDCPQ9H6R7 721 aa4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 ATP6V0A4Q9HBG4 840 aa4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 VSX1Q9NZR4 365 aaPredicted RBP4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 WNT6Q9Y6F9 365 aa4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 ERCC6L2Q5T890 1561 aa4.99□□□□□ -1.61
CDC42BPA-212ENST00000478573 CGB1A6NKQ9 187 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 LINC00473A8K010 186 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 ADM5C9JUS6 153 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 PPP3CBP16298 524 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 RPL17P18621 184 aaKnown RBP4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 ZNF81P51508 661 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 AK2P54819 239 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 SNAPC2Q13487 334 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 DYRK1AQ13627 763 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 PLS1Q14651 629 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 TXNRD1Q16881 649 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 CCDC157Q569K6 752 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 APOA5Q6Q788 366 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 GADL1Q6ZQY3 521 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 TOGARAM2Q6ZUX3 1019 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 SMC5Q8IY18 1101 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 ADGRG5Q8IZF4 528 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 SLC17A8Q8NDX2 589 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 PGBD1Q96JS3 809 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 TIMP4Q99727 224 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 VRK1Q99986 396 aaPredicted RBP4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 BTBD1Q9H0C5 482 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 NUP62CLQ9H1M0 184 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 PNPOQ9NVS9 261 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 CTTNBP2NLQ9P2B4 639 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 FEZ2Q9UHY8 353 aaPredicted RBP4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 NEU2Q9Y3R4 380 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 PCDHA3Q9Y5H8 950 aa4.98□□□□□ -1.61
CDC42BPA-212ENST00000478573 CCDC195A0A1B0GUA6 201 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 H3BUI4 141 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 PHGDHO43175 533 aaKnown RBP4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 PROM1O43490 865 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 MGEA5O60502 916 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 PQBP1O60828 265 aaKnown RBP4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 SUN1O94901 812 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 LDHAP00338 332 aaKnown RBP4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 ELFN1P0C7U0 828 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 ANXA11P50995 505 aaKnown RBP4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 ALDH5A1P51649 535 aaPredicted RBP4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 PIGFQ07326 219 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 SRSF7Q16629 238 aaKnown RBP eCLIP4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 FAM153CQ494X1 144 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 PTF1AQ7RTS3 328 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 FAM90A1Q86YD7 464 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 SPICE1Q8N0Z3 855 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 AOPEPQ8N6M6 819 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 PDPRQ8NCN5 879 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 TMIEQ8NEW7 156 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 SCARB1Q8WTV0 552 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 ANKS1AQ92625 1134 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms