RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 RUNX3Q13761 415 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 KCNB1Q14721 858 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 PON2Q15165 354 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 SNRNP35Q16560 246 aaKnown RBP15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 UNC13DQ70J99 1090 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 LONP2Q86WA8 852 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 SCN4BQ8IWT1 228 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 CEP57L1Q8IYX8 460 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 CPA6Q8N4T0 437 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 RMDN1Q96DB5 314 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 MYRFLQ96LU7 910 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 MMS19Q96T76 1030 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 FGFBP2Q9BYJ0 223 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 SNX25Q9H3E2 840 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 AGPAT3Q9NRZ7 376 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 GKN1Q9NS71 199 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 TMLHEQ9NVH6 421 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 MAGEC2Q9UBF1 373 aaPredicted RBP15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 SIX4Q9UIU6 781 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 MYO15AQ9UKN7 3530 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 GTF3C4Q9UKN8 822 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 USP18Q9UMW8 372 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 PATJQ8NI35 1801 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 COL4A3Q01955 1670 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 TRIM66O15016 1216 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 FAM163BP0C2L3 166 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 DLATP10515 647 aaKnown RBP15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 TDGF1P13385 188 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 CYP2F1P24903 491 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 HOXA6P31267 233 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 WNT7BP56706 349 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 SATB1Q01826 763 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 NR1H3Q13133 447 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 TRPC3Q13507 836 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 CCINQ13939 588 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 DDR2Q16832 855 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 SOWAHAQ2M3V2 549 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 FBXO43Q4G163 708 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 TXNDC8Q6A555 127 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 PRR23BQ6ZRT6 265 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 CBWD2Q8IUF1 395 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 GPIHBP1Q8IV16 184 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 DCLK2Q8N568 766 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 XXYLT1Q8NBI6 393 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 TTC8Q8TAM2 541 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 CXorf38Q8TB03 319 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 ZNF507Q8TCN5 953 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 USP13Q92995 863 aaPredicted RBP15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 ATP2A3Q93084 1043 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 C7orf25Q9BPX7 421 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 SMG9Q9H0W8 520 aaKnown RBP15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 TRPC7Q9HCX4 862 aa15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 TFIP11Q9UBB9 837 aaKnown RBP15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 CDV3Q9UKY7 258 aaKnown RBP15.46■□□□□ 0.07
SMARCE1-209ENST00000478349 COL4A2P08572 1712 aa15.46■□□□□ 0.06
SMARCE1-209ENST00000478349 F5P12259 2224 aa15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 SPTBN4Q9H254 2564 aa15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 PVALEFA0A1B0GWK0 134 aa15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 CLSTN1O94985 981 aa15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 RETP07949 1114 aa15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 ZSCAN22P10073 491 aaPredicted RBP15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 TRIM21P19474 475 aaKnown RBP15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 WARSP23381 471 aaKnown RBP15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 PPP3CCP48454 512 aa15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 IFNAR2P48551 515 aa15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 CDR1P51861 262 aa15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 TNK2Q07912 1038 aa15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 SIM2Q14190 667 aaPredicted RBP15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 MTF1Q14872 753 aa15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 PSMD6Q15008 389 aa15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 LMBRD2Q68DH5 695 aaPredicted RBP15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 TXNDC11Q6PKC3 985 aa15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 CEP68Q76N32 757 aa15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 TMEM150AQ86TG1 271 aa15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 ZSWIM2Q8NEG5 633 aa15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 SPATA17Q96L03 361 aa15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 LRRC3BQ96PB8 259 aa15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 PKMYT1Q99640 499 aa15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 CGRRF1Q99675 332 aa15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 FAM83CQ9BQN1 747 aa15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 RBM12Q9NTZ6 932 aaKnown RBP15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 ZNF292O60281 2723 aa15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 OTOGLQ3ZCN5 2332 aa15.45■□□□□ 0.06
SMARCE1-209ENST00000478349 VPS13AQ96RL7 3174 aa15.44■□□□□ 0.06
SMARCE1-209ENST00000478349 ATP8B3O60423 1300 aa15.44■□□□□ 0.06
SMARCE1-209ENST00000478349 POLR2DO15514 142 aaKnown RBP15.44■□□□□ 0.06
SMARCE1-209ENST00000478349 F13A1P00488 732 aa15.44■□□□□ 0.06
SMARCE1-209ENST00000478349 DRD1P21728 446 aa15.44■□□□□ 0.06
SMARCE1-209ENST00000478349 ATICP31939 592 aa15.44■□□□□ 0.06
SMARCE1-209ENST00000478349 GRIK1P39086 918 aa15.44■□□□□ 0.06
SMARCE1-209ENST00000478349 GPR15P49685 360 aa15.44■□□□□ 0.06
SMARCE1-209ENST00000478349 CYP2J2P51589 502 aa15.44■□□□□ 0.06
SMARCE1-209ENST00000478349 AP3M2P53677 418 aa15.44■□□□□ 0.06
SMARCE1-209ENST00000478349 CYP27A1Q02318 531 aa15.44■□□□□ 0.06
SMARCE1-209ENST00000478349 FAM171BQ6P995 826 aa15.44■□□□□ 0.06
SMARCE1-209ENST00000478349 SHC4Q6S5L8 630 aa15.44■□□□□ 0.06
SMARCE1-209ENST00000478349 Q6ZS52 159 aa15.44■□□□□ 0.06
SMARCE1-209ENST00000478349 EPM2AIP1Q7L775 607 aaPredicted RBP15.44■□□□□ 0.06
SMARCE1-209ENST00000478349 TRAPPC11Q7Z392 1133 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms