RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 TRIM61Q5EBN2 209 aa21.85■■□□□ 1.09
PDLIM1-202ENST00000477757 DCP1BQ8IZD4 617 aaKnown RBP21.85■■□□□ 1.09
PDLIM1-202ENST00000477757 OLIG1Q8TAK6 271 aa21.85■■□□□ 1.09
PDLIM1-202ENST00000477757 LARSQ9P2J5 1176 aaKnown RBP21.85■■□□□ 1.09
PDLIM1-202ENST00000477757 UXTQ9UBK9 157 aaPredicted RBP21.85■■□□□ 1.09
PDLIM1-202ENST00000477757 CPSF3Q9UKF6 684 aaKnown RBP21.85■■□□□ 1.09
PDLIM1-202ENST00000477757 MMP17Q9ULZ9 603 aa21.85■■□□□ 1.09
PDLIM1-202ENST00000477757 MAGED2Q9UNF1 606 aaPredicted RBP21.85■■□□□ 1.09
PDLIM1-202ENST00000477757 IGSF10Q6WRI0 2623 aa21.85■■□□□ 1.09
PDLIM1-202ENST00000477757 A0A0B4J269 797 aa21.84■■□□□ 1.09
PDLIM1-202ENST00000477757 GPR15P49685 360 aa21.84■■□□□ 1.09
PDLIM1-202ENST00000477757 TAF6P49848 677 aa21.84■■□□□ 1.09
PDLIM1-202ENST00000477757 GNL2Q13823 731 aaKnown RBP21.84■■□□□ 1.09
PDLIM1-202ENST00000477757 IL17AQ16552 155 aa21.84■■□□□ 1.09
PDLIM1-202ENST00000477757 WSCD1Q658N2 575 aa21.84■■□□□ 1.09
PDLIM1-202ENST00000477757 SYT2Q8N9I0 419 aaPredicted RBP21.84■■□□□ 1.09
PDLIM1-202ENST00000477757 FBXO18Q8NFZ0 1043 aa21.84■■□□□ 1.09
PDLIM1-202ENST00000477757 FAM212AQ96EL1 285 aa21.84■■□□□ 1.09
PDLIM1-202ENST00000477757 TRMT2BQ96GJ1 504 aaKnown RBP21.84■■□□□ 1.09
PDLIM1-202ENST00000477757 MSTO1Q9BUK6 570 aa21.84■■□□□ 1.09
PDLIM1-202ENST00000477757 SETXQ7Z333 2677 aaKnown RBP21.84■■□□□ 1.09
PDLIM1-202ENST00000477757 PTPRDP23468 1912 aa21.84■■□□□ 1.09
PDLIM1-202ENST00000477757 UPK3BL1B0FP48 263 aa21.83■■□□□ 1.09
PDLIM1-202ENST00000477757 UPK3BL2E5RIL1 263 aa21.83■■□□□ 1.09
PDLIM1-202ENST00000477757 LAD1O00515 517 aa21.83■■□□□ 1.09
PDLIM1-202ENST00000477757 TNFRSF10BO14763 440 aa21.83■■□□□ 1.09
PDLIM1-202ENST00000477757 NOL4O94818 638 aa21.83■■□□□ 1.09
PDLIM1-202ENST00000477757 CKMP06732 381 aa21.83■■□□□ 1.09
PDLIM1-202ENST00000477757 SCP2P22307 547 aa21.83■■□□□ 1.09
PDLIM1-202ENST00000477757 PRPHP41219 470 aa21.83■■□□□ 1.09
PDLIM1-202ENST00000477757 MAPK8P45983 427 aa21.83■■□□□ 1.09
PDLIM1-202ENST00000477757 HYIQ5T013 277 aa21.83■■□□□ 1.09
PDLIM1-202ENST00000477757 PIP4P1Q86T03 277 aa21.83■■□□□ 1.09
PDLIM1-202ENST00000477757 LEO1Q8WVC0 666 aaPredicted RBP21.83■■□□□ 1.09
PDLIM1-202ENST00000477757 SLC22A12Q96S37 553 aa21.83■■□□□ 1.09
PDLIM1-202ENST00000477757 NUSAP1Q9BXS6 441 aaKnown RBP21.83■■□□□ 1.09
PDLIM1-202ENST00000477757 TMLHEQ9NVH6 421 aa21.83■■□□□ 1.09
PDLIM1-202ENST00000477757 C2CD2Q9Y426 696 aa21.83■■□□□ 1.09
PDLIM1-202ENST00000477757 PCDHB6Q9Y5E3 794 aa21.83■■□□□ 1.09
PDLIM1-202ENST00000477757 SMG1Q96Q15 3661 aaKnown RBP21.83■■□□□ 1.09
PDLIM1-202ENST00000477757 TRAV19A0A0A6YYK7 116 aa21.82■■□□□ 1.08
PDLIM1-202ENST00000477757 SPAARA0A1B0GVQ0 90 aa21.82■■□□□ 1.08
PDLIM1-202ENST00000477757 K7EQS6 105 aa21.82■■□□□ 1.08
PDLIM1-202ENST00000477757 USP17L7P0C7H9 530 aa21.82■■□□□ 1.08
PDLIM1-202ENST00000477757 TOB1P50616 345 aaPredicted RBP21.82■■□□□ 1.08
PDLIM1-202ENST00000477757 SLC12A3P55017 1021 aa21.82■■□□□ 1.08
PDLIM1-202ENST00000477757 SEC13P55735 322 aa21.82■■□□□ 1.08
PDLIM1-202ENST00000477757 SIM1P81133 766 aaPredicted RBP21.82■■□□□ 1.08
PDLIM1-202ENST00000477757 NR1H3Q13133 447 aa21.82■■□□□ 1.08
PDLIM1-202ENST00000477757 CRY1Q16526 586 aa21.82■■□□□ 1.08
PDLIM1-202ENST00000477757 C2orf27AQ580R0 203 aa21.82■■□□□ 1.08
PDLIM1-202ENST00000477757 LPCAT2Q7L5N7 544 aa21.82■■□□□ 1.08
PDLIM1-202ENST00000477757 EFCAB13Q8IY85 973 aa21.82■■□□□ 1.08
PDLIM1-202ENST00000477757 KCTD17Q8N5Z5 321 aa21.82■■□□□ 1.08
PDLIM1-202ENST00000477757 MYRFLQ96LU7 910 aa21.82■■□□□ 1.08
PDLIM1-202ENST00000477757 PI4K2AQ9BTU6 479 aa21.82■■□□□ 1.08
PDLIM1-202ENST00000477757 ASB7Q9H672 318 aa21.82■■□□□ 1.08
PDLIM1-202ENST00000477757 TRPC7Q9HCX4 862 aa21.82■■□□□ 1.08
PDLIM1-202ENST00000477757 TCHHQ07283 1943 aa21.82■■□□□ 1.08
PDLIM1-202ENST00000477757 PRPF40AO75400 957 aaKnown RBP21.81■■□□□ 1.08
PDLIM1-202ENST00000477757 TCF3P15923 654 aa21.81■■□□□ 1.08
PDLIM1-202ENST00000477757 ENGP17813 658 aa21.81■■□□□ 1.08
PDLIM1-202ENST00000477757 OPRD1P41143 372 aa21.81■■□□□ 1.08
PDLIM1-202ENST00000477757 P2RY2P41231 377 aa21.81■■□□□ 1.08
PDLIM1-202ENST00000477757 TSPY1Q01534 308 aa21.81■■□□□ 1.08
PDLIM1-202ENST00000477757 SEMA3BQ13214 749 aa21.81■■□□□ 1.08
PDLIM1-202ENST00000477757 NFE2Q16621 373 aaPredicted RBP21.81■■□□□ 1.08
PDLIM1-202ENST00000477757 SDHAF4Q5VUM1 108 aa21.81■■□□□ 1.08
PDLIM1-202ENST00000477757 SLC39A4Q6P5W5 647 aa21.81■■□□□ 1.08
PDLIM1-202ENST00000477757 SYT12Q8IV01 421 aa21.81■■□□□ 1.08
PDLIM1-202ENST00000477757 TTC16Q8NEE8 873 aa21.81■■□□□ 1.08
PDLIM1-202ENST00000477757 SPACA7Q96KW9 195 aa21.81■■□□□ 1.08
PDLIM1-202ENST00000477757 PNMA5Q96PV4 448 aa21.81■■□□□ 1.08
PDLIM1-202ENST00000477757 ABCB6Q9NP58 842 aa21.81■■□□□ 1.08
PDLIM1-202ENST00000477757 NPHP3-ACAD11A0A0J9YXS1 232 aa21.8■■□□□ 1.08
PDLIM1-202ENST00000477757 FAM221BA6H8Z2 402 aa21.8■■□□□ 1.08
PDLIM1-202ENST00000477757 H0Y626 953 aa21.8■■□□□ 1.08
PDLIM1-202ENST00000477757 TRIM16O95361 564 aa21.8■■□□□ 1.08
PDLIM1-202ENST00000477757 NFATC1O95644 943 aa21.8■■□□□ 1.08
PDLIM1-202ENST00000477757 DPP6P42658 865 aa21.8■■□□□ 1.08
PDLIM1-202ENST00000477757 PTGER3P43115 390 aa21.8■■□□□ 1.08
PDLIM1-202ENST00000477757 RPL10AP62906 217 aaKnown RBP21.8■■□□□ 1.08
PDLIM1-202ENST00000477757 ZRSR1Q15695 479 aaKnown RBP21.8■■□□□ 1.08
PDLIM1-202ENST00000477757 PEAR1Q5VY43 1037 aaPredicted RBP21.8■■□□□ 1.08
PDLIM1-202ENST00000477757 DTHD1Q6ZMT9 781 aa21.8■■□□□ 1.08
PDLIM1-202ENST00000477757 PROSER1Q86XN7 944 aa21.8■■□□□ 1.08
PDLIM1-202ENST00000477757 CCDC33Q8N5R6 958 aa21.8■■□□□ 1.08
PDLIM1-202ENST00000477757 SH3RF2Q8TEC5 729 aa21.8■■□□□ 1.08
PDLIM1-202ENST00000477757 FNBP1Q96RU3 617 aa21.8■■□□□ 1.08
PDLIM1-202ENST00000477757 CYP2S1Q96SQ9 504 aa21.8■■□□□ 1.08
PDLIM1-202ENST00000477757 TMEM74BQ9NUR3 256 aa21.8■■□□□ 1.08
PDLIM1-202ENST00000477757 GCNT4Q9P109 453 aa21.8■■□□□ 1.08
PDLIM1-202ENST00000477757 ODF2LQ9ULJ1 636 aa21.8■■□□□ 1.08
PDLIM1-202ENST00000477757 HELZP42694 1942 aaKnown RBP21.8■■□□□ 1.08
PDLIM1-202ENST00000477757 PLXND1Q9Y4D7 1925 aa21.8■■□□□ 1.08
PDLIM1-202ENST00000477757 PCNX2A6NKB5 2137 aa21.79■■□□□ 1.08
PDLIM1-202ENST00000477757 K7ENM7 598 aa21.79■■□□□ 1.08
PDLIM1-202ENST00000477757 ALDH1A2O94788 518 aa21.79■■□□□ 1.08
PDLIM1-202ENST00000477757 CAPNS1P04632 268 aa21.79■■□□□ 1.08
PDLIM1-202ENST00000477757 PLA2G4BP0C869 781 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms