RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 SERPING1P05155 500 aa17.18■□□□□ 0.34
VHL-203ENST00000477538 ADH1AP07327 375 aa17.18■□□□□ 0.34
VHL-203ENST00000477538 SKILP12757 684 aa17.18■□□□□ 0.34
VHL-203ENST00000477538 ADORA2BP29275 332 aa17.18■□□□□ 0.34
VHL-203ENST00000477538 CDR1P51861 262 aa17.18■□□□□ 0.34
VHL-203ENST00000477538 CCDC173Q0VFZ6 552 aa17.18■□□□□ 0.34
VHL-203ENST00000477538 SMARCB1Q12824 385 aa17.18■□□□□ 0.34
VHL-203ENST00000477538 RAB33AQ14088 237 aa17.18■□□□□ 0.34
VHL-203ENST00000477538 NFE2Q16621 373 aaPredicted RBP17.18■□□□□ 0.34
VHL-203ENST00000477538 TDRD12Q587J7 1177 aaKnown RBP17.18■□□□□ 0.34
VHL-203ENST00000477538 ZNF697Q5TEC3 545 aa17.18■□□□□ 0.34
VHL-203ENST00000477538 TAF3Q5VWG9 929 aa17.18■□□□□ 0.34
VHL-203ENST00000477538 WDR59Q6PJI9 974 aa17.18■□□□□ 0.34
VHL-203ENST00000477538 RNF19BQ6ZMZ0 732 aa17.18■□□□□ 0.34
VHL-203ENST00000477538 C4orf50Q6ZRC1 276 aa17.18■□□□□ 0.34
VHL-203ENST00000477538 FUKQ8N0W3 1084 aa17.18■□□□□ 0.34
VHL-203ENST00000477538 SLC2A14Q8TDB8 520 aa17.18■□□□□ 0.34
VHL-203ENST00000477538 SLC20A1Q8WUM9 679 aa17.18■□□□□ 0.34
VHL-203ENST00000477538 LRCH3Q96II8 777 aa17.18■□□□□ 0.34
VHL-203ENST00000477538 KLHL5Q96PQ7 755 aa17.18■□□□□ 0.34
VHL-203ENST00000477538 HNRNPABQ99729 332 aaKnown RBP17.18■□□□□ 0.34
VHL-203ENST00000477538 B3GNT5Q9BYG0 378 aa17.18■□□□□ 0.34
VHL-203ENST00000477538 HAUS4Q9H6D7 363 aa17.18■□□□□ 0.34
VHL-203ENST00000477538 NOCTQ9UK39 431 aaKnown RBP17.18■□□□□ 0.34
VHL-203ENST00000477538 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.18■□□□□ 0.34
VHL-203ENST00000477538 BZW2Q9Y6E2 419 aaKnown RBP17.18■□□□□ 0.34
VHL-203ENST00000477538 OBSL1O75147 1896 aa17.18■□□□□ 0.34
VHL-203ENST00000477538 ATP8B3O60423 1300 aa17.18■□□□□ 0.34
VHL-203ENST00000477538 MTMR11A4FU01 709 aa17.17■□□□□ 0.34
VHL-203ENST00000477538 CLDN5O00501 218 aa17.17■□□□□ 0.34
VHL-203ENST00000477538 KLRC2P26717 231 aa17.17■□□□□ 0.34
VHL-203ENST00000477538 SSTR3P32745 418 aaPredicted RBP17.17■□□□□ 0.34
VHL-203ENST00000477538 CNGA2Q16280 664 aa17.17■□□□□ 0.34
VHL-203ENST00000477538 MEA1Q16626 185 aa17.17■□□□□ 0.34
VHL-203ENST00000477538 GOLGA7BQ2TAP0 167 aa17.17■□□□□ 0.34
VHL-203ENST00000477538 TPGS2Q68CL5 300 aa17.17■□□□□ 0.34
VHL-203ENST00000477538 HGSNATQ68CP4 663 aa17.17■□□□□ 0.34
VHL-203ENST00000477538 FAM35AQ86V20 835 aa17.17■□□□□ 0.34
VHL-203ENST00000477538 ZNF677Q86XU0 584 aa17.17■□□□□ 0.34
VHL-203ENST00000477538 SPATA2LQ8IUW3 424 aaPredicted RBP17.17■□□□□ 0.34
VHL-203ENST00000477538 ZNF461Q8TAF7 563 aa17.17■□□□□ 0.34
VHL-203ENST00000477538 DDX1Q92499 740 aaKnown RBP17.17■□□□□ 0.34
VHL-203ENST00000477538 MRPL38Q96DV4 380 aaKnown RBP17.17■□□□□ 0.34
VHL-203ENST00000477538 PGLYRP2Q96PD5 576 aa17.17■□□□□ 0.34
VHL-203ENST00000477538 PRDM12Q9H4Q4 367 aa17.17■□□□□ 0.34
VHL-203ENST00000477538 ABI2Q9NYB9 513 aaPredicted RBP17.17■□□□□ 0.34
VHL-203ENST00000477538 TSPAN16Q9UKR8 245 aa17.17■□□□□ 0.34
VHL-203ENST00000477538 PCDHB5Q9Y5E4 795 aa17.17■□□□□ 0.34
VHL-203ENST00000477538 C2orf16Q68DN1 1984 aa17.17■□□□□ 0.34
VHL-203ENST00000477538 M0QYV0 167 aa17.16■□□□□ 0.34
VHL-203ENST00000477538 ABLIM3O94929 683 aa17.16■□□□□ 0.34
VHL-203ENST00000477538 PTMAP06454 111 aaKnown RBP17.16■□□□□ 0.34
VHL-203ENST00000477538 MMEP08473 750 aa17.16■□□□□ 0.34
VHL-203ENST00000477538 PLEKP08567 350 aaPredicted RBP17.16■□□□□ 0.34
VHL-203ENST00000477538 CHRNB2P17787 502 aa17.16■□□□□ 0.34
VHL-203ENST00000477538 CDR2Q01850 454 aa17.16■□□□□ 0.34
VHL-203ENST00000477538 LCLAT1Q6UWP7 414 aa17.16■□□□□ 0.34
VHL-203ENST00000477538 PAQR9Q6ZVX9 377 aa17.16■□□□□ 0.34
VHL-203ENST00000477538 ZNF571Q7Z3V5 609 aaPredicted RBP17.16■□□□□ 0.34
VHL-203ENST00000477538 PALB2Q86YC2 1186 aa17.16■□□□□ 0.34
VHL-203ENST00000477538 SPPL2BQ8TCT7 592 aa17.16■□□□□ 0.34
VHL-203ENST00000477538 C2orf15Q8WU43 125 aaKnown RBP17.16■□□□□ 0.34
VHL-203ENST00000477538 FUBP3Q96I24 572 aaKnown RBP eCLIP17.16■□□□□ 0.34
VHL-203ENST00000477538 AGPAT1Q99943 283 aa17.16■□□□□ 0.34
VHL-203ENST00000477538 ZNF518BQ9C0D4 1074 aa17.16■□□□□ 0.34
VHL-203ENST00000477538 PDCL3Q9H2J4 239 aa17.16■□□□□ 0.34
VHL-203ENST00000477538 KRT82Q9NSB4 513 aa17.16■□□□□ 0.34
VHL-203ENST00000477538 ARHGAP20Q9P2F6 1191 aa17.16■□□□□ 0.34
VHL-203ENST00000477538 HESX1Q9UBX0 185 aa17.16■□□□□ 0.34
VHL-203ENST00000477538 AFF4Q9UHB7 1163 aaKnown RBP17.16■□□□□ 0.34
VHL-203ENST00000477538 PCDHGC3Q9UN70 934 aa17.16■□□□□ 0.34
VHL-203ENST00000477538 ANAPC1Q9H1A4 1944 aa17.15■□□□□ 0.34
VHL-203ENST00000477538 MICAL2O94851 1124 aa17.15■□□□□ 0.34
VHL-203ENST00000477538 VNN2O95498 520 aa17.15■□□□□ 0.34
VHL-203ENST00000477538 CFHP08603 1231 aa17.15■□□□□ 0.34
VHL-203ENST00000477538 TNFAIP3P21580 790 aa17.15■□□□□ 0.34
VHL-203ENST00000477538 BDNFP23560 247 aa17.15■□□□□ 0.34
VHL-203ENST00000477538 CDK17Q00537 523 aa17.15■□□□□ 0.34
VHL-203ENST00000477538 FMO1Q01740 532 aa17.15■□□□□ 0.34
VHL-203ENST00000477538 ADCY1Q08828 1119 aa17.15■□□□□ 0.34
VHL-203ENST00000477538 GRIN2CQ14957 1233 aa17.15■□□□□ 0.34
VHL-203ENST00000477538 CFAP221Q4G0U5 840 aa17.15■□□□□ 0.34
VHL-203ENST00000477538 ADGRD2Q7Z7M1 963 aa17.15■□□□□ 0.34
VHL-203ENST00000477538 ATAD1Q8NBU5 361 aa17.15■□□□□ 0.34
VHL-203ENST00000477538 SMARCD1Q96GM5 515 aa17.15■□□□□ 0.34
VHL-203ENST00000477538 PPP1R9BQ96SB3 815 aa17.15■□□□□ 0.34
VHL-203ENST00000477538 CHP1Q99653 195 aa17.15■□□□□ 0.34
VHL-203ENST00000477538 SYT11Q9BT88 431 aa17.15■□□□□ 0.34
VHL-203ENST00000477538 RHOBTB2Q9BYZ6 727 aa17.15■□□□□ 0.34
VHL-203ENST00000477538 ABCB6Q9NP58 842 aa17.15■□□□□ 0.34
VHL-203ENST00000477538 SEPT11Q9NVA2 429 aaKnown RBP17.15■□□□□ 0.34
VHL-203ENST00000477538 TGM5O43548 720 aa17.14■□□□□ 0.33
VHL-203ENST00000477538 CLASP2O75122 1294 aaKnown RBP17.14■□□□□ 0.33
VHL-203ENST00000477538 AP1G2O75843 785 aa17.14■□□□□ 0.33
VHL-203ENST00000477538 GLUD1P00367 558 aa17.14■□□□□ 0.33
VHL-203ENST00000477538 FAM200BP0CF97 657 aa17.14■□□□□ 0.33
VHL-203ENST00000477538 ATF2P15336 505 aa17.14■□□□□ 0.33
VHL-203ENST00000477538 FECHP22830 423 aa17.14■□□□□ 0.33
VHL-203ENST00000477538 CYP2F1P24903 491 aa17.14■□□□□ 0.33
VHL-203ENST00000477538 EIF4A3P38919 411 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms