RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 FAPQ12884 760 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 TEDDM1Q5T9Z0 273 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 GFI1BQ5VTD9 330 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 TAF2Q6P1X5 1199 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 ZNF549Q6P9A3 640 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 GALNT4Q8N4A0 578 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 PSD4Q8NDX1 1056 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 ZNF548Q8NEK5 533 aaPredicted RBP3.42□□□□□ -1.86
XRN1-211ENST00000477237 UBXN4Q92575 508 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 CUL5Q93034 780 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 CLPTM1LQ96KA5 538 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 FSD1LQ9BXM9 530 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 KRTAP4-3Q9BYR4 195 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 SLAMF7Q9NQ25 335 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 MRPS18AQ9NVS2 196 aaKnown RBP3.42□□□□□ -1.86
XRN1-211ENST00000477237 ETAA1Q9NY74 926 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 BCCIPQ9P287 314 aaKnown RBP eCLIP3.42□□□□□ -1.86
XRN1-211ENST00000477237 ADAMTS5Q9UNA0 930 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 B4DGG1 531 aa3.41□□□□□ -1.86
XRN1-211ENST00000477237 H7C1Q1 480 aa3.41□□□□□ -1.86
XRN1-211ENST00000477237 NTN3O00634 580 aaPredicted RBP3.41□□□□□ -1.86
XRN1-211ENST00000477237 DSCR3O14972 297 aa3.41□□□□□ -1.86
XRN1-211ENST00000477237 SLC28A2O43868 658 aa3.41□□□□□ -1.86
XRN1-211ENST00000477237 USP1O94782 785 aa3.41□□□□□ -1.86
XRN1-211ENST00000477237 CENPBP07199 599 aaPredicted RBP3.41□□□□□ -1.86
XRN1-211ENST00000477237 IL6RP08887 468 aaPredicted RBP3.41□□□□□ -1.86
XRN1-211ENST00000477237 CYP19A1P11511 503 aaPredicted RBP3.41□□□□□ -1.86
XRN1-211ENST00000477237 PHKA1P46020 1223 aa3.41□□□□□ -1.86
XRN1-211ENST00000477237 PDE1AP54750 535 aa3.41□□□□□ -1.86
XRN1-211ENST00000477237 SRSF1Q07955 248 aaKnown RBP eCLIP3.41□□□□□ -1.86
XRN1-211ENST00000477237 IL10RAQ13651 578 aa3.41□□□□□ -1.86
XRN1-211ENST00000477237 ZNF268Q14587 947 aaPredicted RBP3.41□□□□□ -1.86
XRN1-211ENST00000477237 CERKLQ49MI3 558 aaPredicted RBP3.41□□□□□ -1.86
XRN1-211ENST00000477237 LVRNQ6Q4G3 990 aa3.41□□□□□ -1.86
XRN1-211ENST00000477237 LHFPL2Q6ZUX7 228 aa3.41□□□□□ -1.86
XRN1-211ENST00000477237 DTX2Q86UW9 622 aa3.41□□□□□ -1.86
XRN1-211ENST00000477237 COG1Q8WTW3 980 aa3.41□□□□□ -1.86
XRN1-211ENST00000477237 HDAC10Q969S8 669 aa3.41□□□□□ -1.86
XRN1-211ENST00000477237 MMS19Q96T76 1030 aa3.41□□□□□ -1.86
XRN1-211ENST00000477237 FAM234AQ9H0X4 552 aa3.41□□□□□ -1.86
XRN1-211ENST00000477237 BRD9Q9H8M2 597 aa3.41□□□□□ -1.86
XRN1-211ENST00000477237 HEY2Q9UBP5 337 aa3.41□□□□□ -1.86
XRN1-211ENST00000477237 CHRM5P08912 532 aaPredicted RBP3.4□□□□□ -1.87
XRN1-211ENST00000477237 SOX5P35711 763 aa3.4□□□□□ -1.87
XRN1-211ENST00000477237 ZNF135P52742 658 aaPredicted RBP3.4□□□□□ -1.87
XRN1-211ENST00000477237 KRTAP10-12P60413 245 aa3.4□□□□□ -1.87
XRN1-211ENST00000477237 GHRHRQ02643 423 aa3.4□□□□□ -1.87
XRN1-211ENST00000477237 ACAP2Q15057 778 aa3.4□□□□□ -1.87
XRN1-211ENST00000477237 CCDC93Q567U6 631 aa3.4□□□□□ -1.87
XRN1-211ENST00000477237 TREML2Q5T2D2 321 aa3.4□□□□□ -1.87
XRN1-211ENST00000477237 KIRREL2Q6UWL6 708 aa3.4□□□□□ -1.87
XRN1-211ENST00000477237 ZNF813Q6ZN06 617 aa3.4□□□□□ -1.87
XRN1-211ENST00000477237 PIM3Q86V86 326 aa3.4□□□□□ -1.87
XRN1-211ENST00000477237 FOXP4Q8IVH2 680 aaPredicted RBP3.4□□□□□ -1.87
XRN1-211ENST00000477237 DNASE2BQ8WZ79 361 aa3.4□□□□□ -1.87
XRN1-211ENST00000477237 DAZAP1Q96EP5 407 aaKnown RBP3.4□□□□□ -1.87
XRN1-211ENST00000477237 VRK1Q99986 396 aaPredicted RBP3.4□□□□□ -1.87
XRN1-211ENST00000477237 ZPBPQ9BS86 351 aa3.4□□□□□ -1.87
XRN1-211ENST00000477237 CAAP1Q9H8G2 361 aa3.4□□□□□ -1.87
XRN1-211ENST00000477237 TRMT13Q9NUP7 481 aaKnown RBP3.4□□□□□ -1.87
XRN1-211ENST00000477237 CCNL1Q9UK58 526 aaPredicted RBP3.4□□□□□ -1.87
XRN1-211ENST00000477237 FZD9O00144 591 aa3.39□□□□□ -1.87
XRN1-211ENST00000477237 KIF20AO95235 890 aa3.39□□□□□ -1.87
XRN1-211ENST00000477237 ANXA1P04083 346 aa3.39□□□□□ -1.87
XRN1-211ENST00000477237 GNAI3P08754 354 aa3.39□□□□□ -1.87
XRN1-211ENST00000477237 GNAI1P63096 354 aa3.39□□□□□ -1.87
XRN1-211ENST00000477237 GTF2H3Q13889 308 aa3.39□□□□□ -1.87
XRN1-211ENST00000477237 PGM2L1Q6PCE3 622 aa3.39□□□□□ -1.87
XRN1-211ENST00000477237 LRRC71Q8N4P6 559 aa3.39□□□□□ -1.87
XRN1-211ENST00000477237 KAT5Q92993 513 aa3.39□□□□□ -1.87
XRN1-211ENST00000477237 SCAMP4Q969E2 229 aa3.39□□□□□ -1.87
XRN1-211ENST00000477237 LMLNQ96KR4 655 aa3.39□□□□□ -1.87
XRN1-211ENST00000477237 EFHD1Q9BUP0 239 aa3.39□□□□□ -1.87
XRN1-211ENST00000477237 RAD54BQ9Y620 910 aa3.39□□□□□ -1.87
XRN1-211ENST00000477237 ZMYM2Q9UBW7 1377 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 LACTBL1A8MY62 500 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 SLC16A3O15427 465 aaKnown RBP3.38□□□□□ -1.87
XRN1-211ENST00000477237 NDUFS2O75306 463 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 PDE8BO95263 885 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 GJB1P08034 283 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 NPSP0C0P6 89 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 PLA2G2AP14555 144 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 CPEP16870 476 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 SLC16A1P53985 500 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 SP2Q02086 613 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 TLE1Q04724 770 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 ZNF91Q05481 1191 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 HABP2Q14520 560 aaPredicted RBP3.38□□□□□ -1.87
XRN1-211ENST00000477237 RAB39AQ14964 217 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 C3orf36Q3SXR2 165 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 KRT71Q3SY84 523 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 KHDC1Q4VXA5 237 aaKnown RBP3.38□□□□□ -1.87
XRN1-211ENST00000477237 C9orf50Q5SZB4 431 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 DAB2IPQ5VWQ8 1189 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 NPNTQ6UXI9 565 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 WDR66Q8TBY9 1149 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 CHAC2Q8WUX2 184 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 MRGPRX4Q96LA9 322 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 SIGLEC11Q96RL6 698 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 CNPPD1Q9BV87 410 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms