RNA–Protein interactions for RNA: ENST00000476807.5

HDLBP-235, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 1,070 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-235ENST00000476807 HOXA6P31267 233 aa12.2□□□□□ -0.46
HDLBP-235ENST00000476807 LHX1P48742 406 aa12.2□□□□□ -0.46
HDLBP-235ENST00000476807 SPEM2Q0P670 501 aa12.2□□□□□ -0.46
HDLBP-235ENST00000476807 SRSF5Q13243 272 aaKnown RBP12.2□□□□□ -0.46
HDLBP-235ENST00000476807 RUNX3Q13761 415 aa12.2□□□□□ -0.46
HDLBP-235ENST00000476807 SIM2Q14190 667 aaPredicted RBP12.2□□□□□ -0.46
HDLBP-235ENST00000476807 ZNF268Q14587 947 aaPredicted RBP12.2□□□□□ -0.46
HDLBP-235ENST00000476807 CCDC142Q17RM4 750 aa12.2□□□□□ -0.46
HDLBP-235ENST00000476807 CFAP221Q4G0U5 840 aa12.2□□□□□ -0.46
HDLBP-235ENST00000476807 TRIM68Q6AZZ1 485 aa12.2□□□□□ -0.46
HDLBP-235ENST00000476807 STXBP4Q6ZWJ1 553 aa12.2□□□□□ -0.46
HDLBP-235ENST00000476807 MON1AQ86VX9 555 aa12.2□□□□□ -0.46
HDLBP-235ENST00000476807 LINC00301Q8NCQ3 95 aa12.2□□□□□ -0.46
HDLBP-235ENST00000476807 GLIS3Q8NEA6 775 aa12.2□□□□□ -0.46
HDLBP-235ENST00000476807 CHFRQ96EP1 664 aa12.2□□□□□ -0.46
HDLBP-235ENST00000476807 TRMT2BQ96GJ1 504 aaKnown RBP12.2□□□□□ -0.46
HDLBP-235ENST00000476807 ANKRD36BP1Q96IX9 119 aa12.2□□□□□ -0.46
HDLBP-235ENST00000476807 MYRFLQ96LU7 910 aa12.2□□□□□ -0.46
HDLBP-235ENST00000476807 TNMDQ9H2S6 317 aa12.2□□□□□ -0.46
HDLBP-235ENST00000476807 EBF3Q9H4W6 596 aa12.2□□□□□ -0.46
HDLBP-235ENST00000476807 UXTQ9UBK9 157 aaPredicted RBP12.2□□□□□ -0.46
HDLBP-235ENST00000476807 GTF3C4Q9UKN8 822 aa12.2□□□□□ -0.46
HDLBP-235ENST00000476807 CDV3Q9UKY7 258 aaKnown RBP12.2□□□□□ -0.46
HDLBP-235ENST00000476807 KIF26AQ9ULI4 1882 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-235ENST00000476807 PTPRJQ12913 1337 aa12.19□□□□□ -0.46
HDLBP-235ENST00000476807 OTOL1A6NHN0 477 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-235ENST00000476807 HCRTO43612 131 aa12.19□□□□□ -0.46
HDLBP-235ENST00000476807 STX6O43752 255 aa12.19□□□□□ -0.46
HDLBP-235ENST00000476807 LRP3O75074 770 aa12.19□□□□□ -0.46
HDLBP-235ENST00000476807 ATXN1P54253 815 aaKnown RBP12.19□□□□□ -0.46
HDLBP-235ENST00000476807 GRSF1Q12849 480 aaKnown RBP eCLIP12.19□□□□□ -0.46
HDLBP-235ENST00000476807 STK38Q15208 465 aa12.19□□□□□ -0.46
HDLBP-235ENST00000476807 E2F4Q16254 413 aa12.19□□□□□ -0.46
HDLBP-235ENST00000476807 SOWAHAQ2M3V2 549 aa12.19□□□□□ -0.46
HDLBP-235ENST00000476807 TMEM196Q5HYL7 178 aa12.19□□□□□ -0.46
HDLBP-235ENST00000476807 LMBRD2Q68DH5 695 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-235ENST00000476807 HEATR6Q6AI08 1181 aaKnown RBP12.19□□□□□ -0.46
HDLBP-235ENST00000476807 PKN3Q6P5Z2 889 aa12.19□□□□□ -0.46
HDLBP-235ENST00000476807 LIMS2Q7Z4I7 341 aa12.19□□□□□ -0.46
HDLBP-235ENST00000476807 WDR5BQ86VZ2 330 aa12.19□□□□□ -0.46
HDLBP-235ENST00000476807 SPATA2LQ8IUW3 424 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-235ENST00000476807 OR5B17Q8NGF7 314 aa12.19□□□□□ -0.46
HDLBP-235ENST00000476807 HPS3Q969F9 1004 aa12.19□□□□□ -0.46
HDLBP-235ENST00000476807 FUBP3Q96I24 572 aaKnown RBP eCLIP12.19□□□□□ -0.46
HDLBP-235ENST00000476807 TRIM9Q9C026 710 aa12.19□□□□□ -0.46
HDLBP-235ENST00000476807 LRRC27Q9C0I9 530 aa12.19□□□□□ -0.46
HDLBP-235ENST00000476807 INTS13Q9NVM9 706 aa12.19□□□□□ -0.46
HDLBP-235ENST00000476807 KBTBD4Q9NVX7 518 aa12.19□□□□□ -0.46
HDLBP-235ENST00000476807 TCHHQ07283 1943 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 ZNF233A6NK53 670 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 K7ELQ4 463 aaPredicted RBP12.18□□□□□ -0.46
HDLBP-235ENST00000476807 TRDMT1O14717 391 aaKnown RBP12.18□□□□□ -0.46
HDLBP-235ENST00000476807 EIF3DO15371 548 aaKnown RBP eCLIP12.18□□□□□ -0.46
HDLBP-235ENST00000476807 TNNC2P02585 160 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 ARSAP15289 507 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 HOXC13P31276 330 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 MAGEA11P43364 429 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 FAM160A1Q05DH4 1040 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 MYO1EQ12965 1108 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 USP4Q13107 963 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 MTF1Q14872 753 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 PDGFRLQ15198 375 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 SURF1Q15526 300 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 ZNF77Q15935 545 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 DUOXA2Q1HG44 320 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 FSTL4Q6MZW2 842 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 CC2D1AQ6P1N0 951 aaPredicted RBP12.18□□□□□ -0.46
HDLBP-235ENST00000476807 FAM171BQ6P995 826 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 DPH6Q7L8W6 267 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.18□□□□□ -0.46
HDLBP-235ENST00000476807 CBWD2Q8IUF1 395 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 SCN4BQ8IWT1 228 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 KBTBD7Q8WVZ9 684 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 HPDLQ96IR7 371 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 SYT15Q9BQS2 421 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 RTKNQ9BST9 563 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 CUEDC2Q9H467 287 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 TRPC7Q9HCX4 862 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 SEMA4GQ9NTN9 838 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 HSPBP1Q9NZL4 362 aa12.18□□□□□ -0.46
HDLBP-235ENST00000476807 R3HCC1Q9Y3T6 440 aaKnown RBP12.18□□□□□ -0.46
HDLBP-235ENST00000476807 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.18□□□□□ -0.46
HDLBP-235ENST00000476807 TRAV19A0A0A6YYK7 116 aa12.17□□□□□ -0.46
HDLBP-235ENST00000476807 SPTLC2O15270 562 aa12.17□□□□□ -0.46
HDLBP-235ENST00000476807 PPP6R2O75170 966 aa12.17□□□□□ -0.46
HDLBP-235ENST00000476807 ATP2C2O75185 946 aa12.17□□□□□ -0.46
HDLBP-235ENST00000476807 CKMP06732 381 aa12.17□□□□□ -0.46
HDLBP-235ENST00000476807 HOXD13P35453 343 aa12.17□□□□□ -0.46
HDLBP-235ENST00000476807 PSMC1P62191 440 aaKnown RBP12.17□□□□□ -0.46
HDLBP-235ENST00000476807 ASIC1P78348 528 aa12.17□□□□□ -0.46
HDLBP-235ENST00000476807 AMPD2Q01433 879 aa12.17□□□□□ -0.46
HDLBP-235ENST00000476807 CNNM4Q6P4Q7 775 aa12.17□□□□□ -0.46
HDLBP-235ENST00000476807 C4orf50Q6ZRC1 276 aa12.17□□□□□ -0.46
HDLBP-235ENST00000476807 CEP68Q76N32 757 aa12.17□□□□□ -0.46
HDLBP-235ENST00000476807 EPM2AIP1Q7L775 607 aaPredicted RBP12.17□□□□□ -0.46
HDLBP-235ENST00000476807 WDR49Q8IV35 697 aa12.17□□□□□ -0.46
HDLBP-235ENST00000476807 MYLPFQ96A32 169 aa12.17□□□□□ -0.46
HDLBP-235ENST00000476807 DHX58Q96C10 678 aa12.17□□□□□ -0.46
HDLBP-235ENST00000476807 KIAA1586Q9HCI6 787 aa12.17□□□□□ -0.46
HDLBP-235ENST00000476807 CDH9Q9ULB4 789 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms