RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 ZBTB11O95625 1053 aaPredicted RBP4.34□□□□□ -1.72
CD55-208ENST00000476590 CAPN1P07384 714 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 FAM153BP0C7A2 387 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 NCAM1P13591 858 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 CHN1P15882 459 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 MPSTP25325 297 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 MARK3P27448 753 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 PKLRP30613 574 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 NUDT1P36639 197 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 LONP1P36776 959 aaKnown RBP4.34□□□□□ -1.72
CD55-208ENST00000476590 RGS19P49795 217 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 FXR1P51114 621 aaKnown RBP eCLIP4.34□□□□□ -1.72
CD55-208ENST00000476590 RENBPP51606 427 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 NUP107P57740 925 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 SSTP61278 116 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 TFAP4Q01664 338 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 HNRNPDQ14103 355 aaKnown RBP4.34□□□□□ -1.72
CD55-208ENST00000476590 NR1I3Q14994 352 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 MLC1Q15049 377 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 TAF12Q16514 161 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 EDRF1Q3B7T1 1238 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 Q3ZCU0 254 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 FAM153CQ494X1 144 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 CAVIN4Q5BKX8 364 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 C6orf118Q5T5N4 469 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 MEI1Q5TIA1 1274 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 RNF43Q68DV7 783 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 TATDN1Q6P1N9 297 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 AGMOQ6ZNB7 445 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 MRPL10Q7Z7H8 261 aaKnown RBP4.34□□□□□ -1.72
CD55-208ENST00000476590 GLRX5Q86SX6 157 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 FITM2Q8N6M3 262 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 TERB1Q8NA31 727 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 C12orf50Q8NA57 414 aaPredicted RBP4.34□□□□□ -1.72
CD55-208ENST00000476590 TRPM4Q8TD43 1214 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 KCNG4Q8TDN1 519 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 IPCEF1Q8WWN9 437 aaPredicted RBP4.34□□□□□ -1.72
CD55-208ENST00000476590 TLCD1Q96CP7 247 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 CRELD1Q96HD1 420 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 ECSITQ9BQ95 431 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 TUBA1CQ9BQE3 449 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 PSD2Q9BQI7 771 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 APOL5Q9BWW9 433 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 ANKRD2Q9GZV1 360 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 DENND2DQ9H6A0 471 aaPredicted RBP4.34□□□□□ -1.72
CD55-208ENST00000476590 ARMC7Q9H6L4 198 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 CD209Q9NNX6 404 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 PPP1R14DQ9NXH3 145 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 TAS2R7Q9NYW3 318 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 GGA3Q9NZ52 723 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 FAM153AQ9UHL3 310 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 VPS51Q9UID3 782 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 POLHQ9Y253 713 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 MAGED1Q9Y5V3 778 aaPredicted RBP4.34□□□□□ -1.72
CD55-208ENST00000476590 NFS1Q9Y697 457 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 CYP46A1Q9Y6A2 500 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 MAD1L1Q9Y6D9 718 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 AK5Q9Y6K8 562 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 ABCC4O15439 1325 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 WDR19Q8NEZ3 1342 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 PRAG1Q86YV5 1406 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 PBRM1Q86U86 1689 aa4.34□□□□□ -1.72
CD55-208ENST00000476590 MYH11P35749 1972 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 MYH2Q9UKX2 1941 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 MAST1Q9Y2H9 1570 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 HMGXB3Q12766 1538 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 LRRC7Q96NW7 1537 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 CDK12Q9NYV4 1490 aaPredicted RBP4.33□□□□□ -1.72
CD55-208ENST00000476590 PTPRTO14522 1441 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 CARMIL2Q6F5E8 1435 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 MAP3K15Q6ZN16 1313 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 MYO3BQ8WXR4 1341 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 VSTM5A8MXK1 200 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 LACTBL1A8MY62 500 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 F6X3S4 739 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 SLC9A3R1O14745 358 aaPredicted RBP4.33□□□□□ -1.72
CD55-208ENST00000476590 NDUFA2O43678 99 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 KRT86O43790 486 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 RNASEH1O60930 286 aaKnown RBP4.33□□□□□ -1.72
CD55-208ENST00000476590 ENTPD5O75356 428 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 DCTN3O75935 186 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 ECDO95905 644 aaPredicted RBP4.33□□□□□ -1.72
CD55-208ENST00000476590 FAM228BP0C875 321 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 KRT5P13647 590 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 HSPA6P17066 643 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 ITGAXP20702 1163 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 ITGA6P23229 1130 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 CXCR2P25025 360 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 CTNNA1P35221 906 aaKnown RBP4.33□□□□□ -1.72
CD55-208ENST00000476590 HSD17B3P37058 310 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 PAFAH1B1P43034 410 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 GPD2P43304 727 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 CARSP49589 748 aaKnown RBP4.33□□□□□ -1.72
CD55-208ENST00000476590 ENTPD1P49961 510 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 PEX3P56589 373 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 GPR85P60893 370 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 SRP54P61011 504 aaKnown RBP4.33□□□□□ -1.72
CD55-208ENST00000476590 NFKB2Q00653 900 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 IFITM2Q01629 132 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 GRIN1Q05586 938 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms