RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 C16orf70Q9BSU1 422 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 LHX5Q9H2C1 402 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 RNF19AQ9NV58 838 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 DPP3Q9NY33 737 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.41□□□□□ -0.9
CCDC66-216ENST00000476142 A0A087WUV0 522 aaPredicted RBP9.4□□□□□ -0.9
CCDC66-216ENST00000476142 CST8O60676 142 aa9.4□□□□□ -0.9
CCDC66-216ENST00000476142 GRAP2O75791 330 aa9.4□□□□□ -0.9
CCDC66-216ENST00000476142 SNAI1O95863 264 aaPredicted RBP9.4□□□□□ -0.9
CCDC66-216ENST00000476142 VIMP08670 466 aaKnown RBP9.4□□□□□ -0.9
CCDC66-216ENST00000476142 CETPP11597 493 aa9.4□□□□□ -0.9
CCDC66-216ENST00000476142 CREB1P16220 341 aa9.4□□□□□ -0.9
CCDC66-216ENST00000476142 NDST1P52848 882 aa9.4□□□□□ -0.9
CCDC66-216ENST00000476142 VCPP55072 806 aaKnown RBP9.4□□□□□ -0.9
CCDC66-216ENST00000476142 FAM187BQ17R55 369 aa9.4□□□□□ -0.9
CCDC66-216ENST00000476142 GKAP1Q5VSY0 366 aaPredicted RBP9.4□□□□□ -0.9
CCDC66-216ENST00000476142 HIBCHQ6NVY1 386 aaPredicted RBP9.4□□□□□ -0.9
CCDC66-216ENST00000476142 EXOC3L1Q86VI1 746 aa9.4□□□□□ -0.9
CCDC66-216ENST00000476142 RFX6Q8HWS3 928 aa9.4□□□□□ -0.9
CCDC66-216ENST00000476142 CACNA2D3Q8IZS8 1091 aa9.4□□□□□ -0.9
CCDC66-216ENST00000476142 NIPA2Q8N8Q9 360 aa9.4□□□□□ -0.9
CCDC66-216ENST00000476142 KCTD6Q8NC69 237 aa9.4□□□□□ -0.9
CCDC66-216ENST00000476142 MRRFQ96E11 262 aaKnown RBP9.4□□□□□ -0.9
CCDC66-216ENST00000476142 SEC16BQ96JE7 1060 aa9.4□□□□□ -0.9
CCDC66-216ENST00000476142 L3MBTL3Q96JM7 780 aaPredicted RBP9.4□□□□□ -0.9
CCDC66-216ENST00000476142 CABS1Q96KC9 395 aa9.4□□□□□ -0.9
CCDC66-216ENST00000476142 CALN1Q9BXU9 219 aa9.4□□□□□ -0.9
CCDC66-216ENST00000476142 ASB7Q9H672 318 aa9.4□□□□□ -0.9
CCDC66-216ENST00000476142 SETD4Q9NVD3 440 aa9.4□□□□□ -0.9
CCDC66-216ENST00000476142 LOC102724159A0A0B4J2E5 919 aa9.4□□□□□ -0.91
CCDC66-216ENST00000476142 ATP2C2O75185 946 aa9.4□□□□□ -0.91
CCDC66-216ENST00000476142 NPTXRO95502 500 aa9.4□□□□□ -0.91
CCDC66-216ENST00000476142 ITGBL1O95965 494 aaPredicted RBP9.4□□□□□ -0.91
CCDC66-216ENST00000476142 KRT7P08729 469 aa9.4□□□□□ -0.91
CCDC66-216ENST00000476142 CD48P09326 243 aa9.4□□□□□ -0.91
CCDC66-216ENST00000476142 SMPD1P17405 629 aa9.4□□□□□ -0.91
CCDC66-216ENST00000476142 ATICP31939 592 aa9.4□□□□□ -0.91
CCDC66-216ENST00000476142 MAGEA4P43358 317 aa9.4□□□□□ -0.91
CCDC66-216ENST00000476142 RGS7P49802 495 aa9.4□□□□□ -0.91
CCDC66-216ENST00000476142 COPS2P61201 443 aa9.4□□□□□ -0.91
CCDC66-216ENST00000476142 RBP5P82980 135 aa9.4□□□□□ -0.91
CCDC66-216ENST00000476142 SLC25A11Q02978 314 aaKnown RBP9.4□□□□□ -0.91
CCDC66-216ENST00000476142 PWP2Q15269 919 aaKnown RBP9.4□□□□□ -0.91
CCDC66-216ENST00000476142 TAF5Q15542 800 aa9.4□□□□□ -0.91
CCDC66-216ENST00000476142 CDO1Q16878 200 aa9.4□□□□□ -0.91
CCDC66-216ENST00000476142 MFSD5Q6N075 450 aa9.4□□□□□ -0.91
CCDC66-216ENST00000476142 ZCCHC9Q8N567 271 aaKnown RBP9.4□□□□□ -0.91
CCDC66-216ENST00000476142 ARFGAP1Q8N6T3 406 aa9.4□□□□□ -0.91
CCDC66-216ENST00000476142 CCHCR1Q8TD31 782 aa9.4□□□□□ -0.91
CCDC66-216ENST00000476142 GTF3C2Q8WUA4 911 aaPredicted RBP9.4□□□□□ -0.91
CCDC66-216ENST00000476142 ATXN2LQ8WWM7 1075 aaKnown RBP9.4□□□□□ -0.91
CCDC66-216ENST00000476142 SERPINB12Q96P63 405 aa9.4□□□□□ -0.91
CCDC66-216ENST00000476142 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.4□□□□□ -0.91
CCDC66-216ENST00000476142 TMEM120BA0PK00 339 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 DNALI1O14645 258 aaPredicted RBP9.39□□□□□ -0.91
CCDC66-216ENST00000476142 RNF8O76064 485 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 PECAM1P16284 738 aaPredicted RBP9.39□□□□□ -0.91
CCDC66-216ENST00000476142 DRD4P21917 467 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 ATP5DP30049 168 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 OTUD4Q01804 1114 aaKnown RBP9.39□□□□□ -0.91
CCDC66-216ENST00000476142 OR6B2Q6IFH4 312 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 CCDC121Q6ZUS5 278 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 GPR142Q7Z601 462 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 LINC01465Q8N7H1 131 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 C12orf29Q8N999 325 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 ACTL9Q8TC94 416 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 BRI3BPQ8WY22 251 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 CCDC77Q9BR77 488 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 APOL6Q9BWW8 343 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 CXCL16Q9H2A7 254 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 CYP3A43Q9HB55 503 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 TPX2Q9ULW0 747 aaKnown RBP9.39□□□□□ -0.91
CCDC66-216ENST00000476142 EVPLQ92817 2033 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 PCNTO95613 3336 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 GOLGA6L7A0A1B0GV03 622 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 H0YHG0 523 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 MMP3P08254 477 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 VDRP11473 427 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 MIPP30301 263 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 POU5F1BQ06416 359 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 MYO1EQ12965 1108 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 MTM1Q13496 603 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 FASTKD3Q14CZ7 662 aaKnown RBP9.39□□□□□ -0.91
CCDC66-216ENST00000476142 TMED2Q15363 201 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 CNGA2Q16280 664 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 GLRA4Q5JXX5 417 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 POLNQ7Z5Q5 900 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 SRRM1Q8IYB3 904 aaKnown RBP9.39□□□□□ -0.91
CCDC66-216ENST00000476142 CCDC13Q8IYE1 715 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 LRRC34Q8IZ02 419 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 CXorf38Q8TB03 319 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 GDAP1Q8TB36 358 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 RSAD2Q8WXG1 361 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 CENPTQ96BT3 561 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 VPS37BQ9H9H4 285 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 FAM49BQ9NUQ9 324 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 SNTG2Q9NY99 539 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 WDR35Q9P2L0 1181 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 TSPAN16Q9UKR8 245 aa9.39□□□□□ -0.91
CCDC66-216ENST00000476142 ITGA11Q9UKX5 1188 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms