RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 PWP2Q15269 919 aaKnown RBP17.53■□□□□ 0.4
TVP23B-202ENST00000476139 GRIK4Q16099 956 aa17.53■□□□□ 0.4
TVP23B-202ENST00000476139 GPR142Q7Z601 462 aa17.53■□□□□ 0.4
TVP23B-202ENST00000476139 TAX1BP1Q86VP1 789 aa17.53■□□□□ 0.4
TVP23B-202ENST00000476139 TMEM109Q9BVC6 243 aa17.53■□□□□ 0.4
TVP23B-202ENST00000476139 FAM129AQ9BZQ8 928 aa17.53■□□□□ 0.4
TVP23B-202ENST00000476139 C3orf70A6NLC5 250 aaPredicted RBP17.52■□□□□ 0.4
TVP23B-202ENST00000476139 MED7O43513 233 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 TNFAIP2Q03169 654 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 TMEM132DQ14C87 1099 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 FAM182AQ5T1J6 154 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 GKAP1Q5VSY0 366 aaPredicted RBP17.52■□□□□ 0.4
TVP23B-202ENST00000476139 EXOC3L1Q86VI1 746 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 CHMP6Q96FZ7 201 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 ASB7Q9H672 318 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 CDHR5Q9HBB8 845 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 INTS9Q9NV88 658 aaKnown RBP17.52■□□□□ 0.4
TVP23B-202ENST00000476139 GGT7Q9UJ14 662 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 STRIP2Q9ULQ0 834 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 A0A1B0GUA9 196 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 RBM47A0AV96 593 aaKnown RBP17.52■□□□□ 0.4
TVP23B-202ENST00000476139 M0QYV0 167 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 PAEPP09466 180 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 CETPP11597 493 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 SLC25A11Q02978 314 aaKnown RBP17.52■□□□□ 0.4
TVP23B-202ENST00000476139 RAB6CQ53S08 254 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 TNFAIP8L3Q5GJ75 292 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 PRAMEF19Q5SWL8 479 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 SH3PXD2AQ5TCZ1 1133 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 SPATS2Q86XZ4 545 aaKnown RBP17.52■□□□□ 0.4
TVP23B-202ENST00000476139 IFNLR1Q8IU57 520 aaPredicted RBP17.52■□□□□ 0.4
TVP23B-202ENST00000476139 LRRC34Q8IZ02 419 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 NIPA2Q8N8Q9 360 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 ACAP3Q96P50 834 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 RAB6CQ9H0N0 254 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 DPP3Q9NY33 737 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 NINJ2Q9NZG7 142 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 HES2Q9Y543 173 aa17.52■□□□□ 0.4
TVP23B-202ENST00000476139 AGTP01019 485 aa17.52■□□□□ 0.39
TVP23B-202ENST00000476139 VIMP08670 466 aaKnown RBP17.52■□□□□ 0.39
TVP23B-202ENST00000476139 IBSPP21815 317 aaPredicted RBP17.52■□□□□ 0.39
TVP23B-202ENST00000476139 GPD2P43304 727 aa17.52■□□□□ 0.39
TVP23B-202ENST00000476139 ARSEP51690 589 aa17.52■□□□□ 0.39
TVP23B-202ENST00000476139 MNAT1P51948 309 aa17.52■□□□□ 0.39
TVP23B-202ENST00000476139 NDST1P52848 882 aa17.52■□□□□ 0.39
TVP23B-202ENST00000476139 TAP1Q03518 808 aa17.52■□□□□ 0.39
TVP23B-202ENST00000476139 IPO4Q8TEX9 1081 aaKnown RBP17.52■□□□□ 0.39
TVP23B-202ENST00000476139 MAML3Q96JK9 1138 aa17.52■□□□□ 0.39
TVP23B-202ENST00000476139 FAM49AQ9H0Q0 323 aaPredicted RBP17.52■□□□□ 0.39
TVP23B-202ENST00000476139 TBK1Q9UHD2 729 aa17.52■□□□□ 0.39
TVP23B-202ENST00000476139 STRNO43815 780 aa17.51■□□□□ 0.39
TVP23B-202ENST00000476139 IFNB1P01574 187 aa17.51■□□□□ 0.39
TVP23B-202ENST00000476139 ICE2Q659A1 982 aa17.51■□□□□ 0.39
TVP23B-202ENST00000476139 HIBCHQ6NVY1 386 aaPredicted RBP17.51■□□□□ 0.39
TVP23B-202ENST00000476139 EMID1Q96A84 441 aaPredicted RBP17.51■□□□□ 0.39
TVP23B-202ENST00000476139 PIWIL1Q96J94 861 aaKnown RBP17.51■□□□□ 0.39
TVP23B-202ENST00000476139 PTPN18Q99952 460 aa17.51■□□□□ 0.39
TVP23B-202ENST00000476139 CNOT10Q9H9A5 744 aaKnown RBP17.51■□□□□ 0.39
TVP23B-202ENST00000476139 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.51■□□□□ 0.39
TVP23B-202ENST00000476139 FSBPO95073 299 aa17.51■□□□□ 0.39
TVP23B-202ENST00000476139 MMP3P08254 477 aa17.51■□□□□ 0.39
TVP23B-202ENST00000476139 CYP3A5P20815 502 aa17.51■□□□□ 0.39
TVP23B-202ENST00000476139 ACTN3Q08043 901 aaPredicted RBP17.51■□□□□ 0.39
TVP23B-202ENST00000476139 GPS1Q13098 491 aa17.51■□□□□ 0.39
TVP23B-202ENST00000476139 KIF12Q96FN5 646 aa17.51■□□□□ 0.39
TVP23B-202ENST00000476139 RBM15Q96T37 977 aaKnown RBP eCLIP17.51■□□□□ 0.39
TVP23B-202ENST00000476139 ELAC2Q9BQ52 826 aaKnown RBP17.51■□□□□ 0.39
TVP23B-202ENST00000476139 CDR1P51861 262 aa17.5■□□□□ 0.39
TVP23B-202ENST00000476139 CAV1Q03135 178 aa17.5■□□□□ 0.39
TVP23B-202ENST00000476139 CYP4F22Q6NT55 531 aa17.5■□□□□ 0.39
TVP23B-202ENST00000476139 CYP4X1Q8N118 509 aa17.5■□□□□ 0.39
TVP23B-202ENST00000476139 ALLCQ8N6M5 410 aa17.5■□□□□ 0.39
TVP23B-202ENST00000476139 NPLOC4Q8TAT6 608 aa17.5■□□□□ 0.39
TVP23B-202ENST00000476139 ATXN2LQ8WWM7 1075 aaKnown RBP17.5■□□□□ 0.39
TVP23B-202ENST00000476139 PPEF2O14830 753 aa17.5■□□□□ 0.39
TVP23B-202ENST00000476139 GRAP2O75791 330 aa17.5■□□□□ 0.39
TVP23B-202ENST00000476139 ACVR2BQ13705 512 aa17.5■□□□□ 0.39
TVP23B-202ENST00000476139 OASLQ15646 514 aaKnown RBP17.5■□□□□ 0.39
TVP23B-202ENST00000476139 DUSP28Q4G0W2 176 aa17.5■□□□□ 0.39
TVP23B-202ENST00000476139 ANKRD42Q8N9B4 389 aa17.5■□□□□ 0.39
TVP23B-202ENST00000476139 ZMAT2Q96NC0 199 aaKnown RBP17.5■□□□□ 0.39
TVP23B-202ENST00000476139 ROPN1BQ9BZX4 212 aaPredicted RBP17.5■□□□□ 0.39
TVP23B-202ENST00000476139 ROPN1Q9HAT0 212 aaPredicted RBP17.5■□□□□ 0.39
TVP23B-202ENST00000476139 SGK1O00141 431 aa17.49■□□□□ 0.39
TVP23B-202ENST00000476139 CST8O60676 142 aa17.49■□□□□ 0.39
TVP23B-202ENST00000476139 HOXA11P31270 313 aaPredicted RBP17.49■□□□□ 0.39
TVP23B-202ENST00000476139 ATICP31939 592 aa17.49■□□□□ 0.39
TVP23B-202ENST00000476139 GTF2A2P52657 109 aa17.49■□□□□ 0.39
TVP23B-202ENST00000476139 TAB3Q8N5C8 712 aaPredicted RBP17.49■□□□□ 0.39
TVP23B-202ENST00000476139 OR6J1Q8NGC5 347 aa17.49■□□□□ 0.39
TVP23B-202ENST00000476139 DDX56Q9NY93 547 aaKnown RBP17.49■□□□□ 0.39
TVP23B-202ENST00000476139 GDF10P55107 478 aa17.49■□□□□ 0.39
TVP23B-202ENST00000476139 COPS2P61201 443 aa17.49■□□□□ 0.39
TVP23B-202ENST00000476139 FASTKD3Q14CZ7 662 aaKnown RBP17.49■□□□□ 0.39
TVP23B-202ENST00000476139 MFSD5Q6N075 450 aa17.49■□□□□ 0.39
TVP23B-202ENST00000476139 YTHDF3Q7Z739 585 aaKnown RBP17.49■□□□□ 0.39
TVP23B-202ENST00000476139 CNPY4Q8N129 248 aa17.49■□□□□ 0.39
TVP23B-202ENST00000476139 ARHGEF2Q92974 986 aaKnown RBP17.49■□□□□ 0.39
TVP23B-202ENST00000476139 LENG1Q96BZ8 264 aaPredicted RBP17.49■□□□□ 0.39
TVP23B-202ENST00000476139 ZNF317Q96PQ6 595 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms