RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 EBF1Q9UH73 591 aa22.02■■□□□ 1.12
VPS36-203ENST00000475375 EML5Q05BV3 1969 aa22.01■■□□□ 1.11
VPS36-203ENST00000475375 TRAV19A0A0A6YYK7 116 aa22.01■■□□□ 1.11
VPS36-203ENST00000475375 SLC26A4O43511 780 aa22.01■■□□□ 1.11
VPS36-203ENST00000475375 USP17L7P0C7H9 530 aa22.01■■□□□ 1.11
VPS36-203ENST00000475375 PNPLA4P41247 253 aa22.01■■□□□ 1.11
VPS36-203ENST00000475375 FOXC1Q12948 553 aa22.01■■□□□ 1.11
VPS36-203ENST00000475375 NR1H3Q13133 447 aa22.01■■□□□ 1.11
VPS36-203ENST00000475375 UNQ6494/PRO21346Q6UXR6 183 aa22.01■■□□□ 1.11
VPS36-203ENST00000475375 EFCAB13Q8IY85 973 aa22.01■■□□□ 1.11
VPS36-203ENST00000475375 POMGNT1Q8WZA1 660 aa22.01■■□□□ 1.11
VPS36-203ENST00000475375 RAD54LQ92698 747 aa22.01■■□□□ 1.11
VPS36-203ENST00000475375 CYP2S1Q96SQ9 504 aa22.01■■□□□ 1.11
VPS36-203ENST00000475375 TCHHQ07283 1943 aa22.01■■□□□ 1.11
VPS36-203ENST00000475375 LNP1A1A4G5 178 aa22■■□□□ 1.11
VPS36-203ENST00000475375 C1QTNF9BB2RNN3 333 aa22■■□□□ 1.11
VPS36-203ENST00000475375 H3BQV1 296 aa22■■□□□ 1.11
VPS36-203ENST00000475375 HUS1O60921 280 aa22■■□□□ 1.11
VPS36-203ENST00000475375 IL18RAPO95256 599 aa22■■□□□ 1.11
VPS36-203ENST00000475375 C1QTNF9P0C862 333 aa22■■□□□ 1.11
VPS36-203ENST00000475375 PLCG1P19174 1290 aa22■■□□□ 1.11
VPS36-203ENST00000475375 ACAT1P24752 427 aaKnown RBP22■■□□□ 1.11
VPS36-203ENST00000475375 CYP2F1P24903 491 aa22■■□□□ 1.11
VPS36-203ENST00000475375 TFAMQ00059 246 aaKnown RBP22■■□□□ 1.11
VPS36-203ENST00000475375 USP39Q53GS9 565 aaKnown RBP22■■□□□ 1.11
VPS36-203ENST00000475375 SH3PXD2AQ5TCZ1 1133 aa22■■□□□ 1.11
VPS36-203ENST00000475375 PDCL2Q8N4E4 241 aa22■■□□□ 1.11
VPS36-203ENST00000475375 LRRC15Q8TF66 581 aa22■■□□□ 1.11
VPS36-203ENST00000475375 EZH1Q92800 747 aaPredicted RBP22■■□□□ 1.11
VPS36-203ENST00000475375 TPSD1Q9BZJ3 242 aa22■■□□□ 1.11
VPS36-203ENST00000475375 TMEM206Q9H813 350 aa22■■□□□ 1.11
VPS36-203ENST00000475375 BLOC1S4Q9NUP1 217 aa22■■□□□ 1.11
VPS36-203ENST00000475375 DDX43Q9NXZ2 648 aaKnown RBP22■■□□□ 1.11
VPS36-203ENST00000475375 FAM208BQ5VWN6 2430 aa22■■□□□ 1.11
VPS36-203ENST00000475375 KHNYNO15037 678 aaKnown RBP21.99■■□□□ 1.11
VPS36-203ENST00000475375 TADA3O75528 432 aa21.99■■□□□ 1.11
VPS36-203ENST00000475375 POLR2BP30876 1174 aaKnown RBP21.99■■□□□ 1.11
VPS36-203ENST00000475375 SEC13P55735 322 aa21.99■■□□□ 1.11
VPS36-203ENST00000475375 ZNF77Q15935 545 aa21.99■■□□□ 1.11
VPS36-203ENST00000475375 CYP2U1Q7Z449 544 aa21.99■■□□□ 1.11
VPS36-203ENST00000475375 TTC30AQ86WT1 665 aa21.99■■□□□ 1.11
VPS36-203ENST00000475375 SCN4BQ8IWT1 228 aa21.99■■□□□ 1.11
VPS36-203ENST00000475375 CCDC26Q8TAB7 109 aa21.99■■□□□ 1.11
VPS36-203ENST00000475375 SLC22A12Q96S37 553 aa21.99■■□□□ 1.11
VPS36-203ENST00000475375 FIZ1Q96SL8 496 aa21.99■■□□□ 1.11
VPS36-203ENST00000475375 TMEM9BQ9NQ34 198 aa21.99■■□□□ 1.11
VPS36-203ENST00000475375 L1RE1Q9UN81 338 aa21.99■■□□□ 1.11
VPS36-203ENST00000475375 AGAP1Q9UPQ3 857 aa21.99■■□□□ 1.11
VPS36-203ENST00000475375 DENND4CQ5VZ89 1909 aa21.98■■□□□ 1.11
VPS36-203ENST00000475375 NOL4O94818 638 aa21.98■■□□□ 1.11
VPS36-203ENST00000475375 MYL7Q01449 175 aa21.98■■□□□ 1.11
VPS36-203ENST00000475375 USP4Q13107 963 aa21.98■■□□□ 1.11
VPS36-203ENST00000475375 KCNB1Q14721 858 aa21.98■■□□□ 1.11
VPS36-203ENST00000475375 EML3Q32P44 896 aa21.98■■□□□ 1.11
VPS36-203ENST00000475375 INTS6LQ5JSJ4 861 aaKnown RBP21.98■■□□□ 1.11
VPS36-203ENST00000475375 ANO7Q6IWH7 933 aa21.98■■□□□ 1.11
VPS36-203ENST00000475375 C11orf74Q86VG3 221 aa21.98■■□□□ 1.11
VPS36-203ENST00000475375 NT5DC4Q86YG4 428 aa21.98■■□□□ 1.11
VPS36-203ENST00000475375 SPATA2LQ8IUW3 424 aaPredicted RBP21.98■■□□□ 1.11
VPS36-203ENST00000475375 ARL14EPQ8N8R7 260 aaPredicted RBP21.98■■□□□ 1.11
VPS36-203ENST00000475375 KRI1Q8N9T8 703 aaKnown RBP21.98■■□□□ 1.11
VPS36-203ENST00000475375 FSIP1Q8NA03 581 aa21.98■■□□□ 1.11
VPS36-203ENST00000475375 SH3RF2Q8TEC5 729 aa21.98■■□□□ 1.11
VPS36-203ENST00000475375 LEO1Q8WVC0 666 aaPredicted RBP21.98■■□□□ 1.11
VPS36-203ENST00000475375 TRMT2BQ96GJ1 504 aaKnown RBP21.98■■□□□ 1.11
VPS36-203ENST00000475375 ACBD6Q9BR61 282 aa21.98■■□□□ 1.11
VPS36-203ENST00000475375 FAM213AQ9BRX8 229 aa21.98■■□□□ 1.11
VPS36-203ENST00000475375 IKZF4Q9H2S9 585 aa21.98■■□□□ 1.11
VPS36-203ENST00000475375 ABCB6Q9NP58 842 aa21.98■■□□□ 1.11
VPS36-203ENST00000475375 GTF3C4Q9UKN8 822 aa21.98■■□□□ 1.11
VPS36-203ENST00000475375 ZMIZ1Q9ULJ6 1067 aa21.98■■□□□ 1.11
VPS36-203ENST00000475375 STYXL1Q9Y6J8 313 aa21.98■■□□□ 1.11
VPS36-203ENST00000475375 ITGB3P05106 788 aa21.97■■□□□ 1.11
VPS36-203ENST00000475375 SPINK2P20155 84 aa21.97■■□□□ 1.11
VPS36-203ENST00000475375 POU5F1Q01860 360 aaKnown RBP21.97■■□□□ 1.11
VPS36-203ENST00000475375 POSTNQ15063 836 aa21.97■■□□□ 1.11
VPS36-203ENST00000475375 C2orf27AQ580R0 203 aa21.97■■□□□ 1.11
VPS36-203ENST00000475375 PMS2CLQ68D20 193 aa21.97■■□□□ 1.11
VPS36-203ENST00000475375 CRELD2Q6UXH1 353 aaPredicted RBP21.97■■□□□ 1.11
VPS36-203ENST00000475375 LARP4BQ92615 738 aaKnown RBP21.97■■□□□ 1.11
VPS36-203ENST00000475375 CIZ1Q9ULV3 898 aaPredicted RBP21.97■■□□□ 1.11
VPS36-203ENST00000475375 OBSL1O75147 1896 aa21.96■■□□□ 1.11
VPS36-203ENST00000475375 C2orf78A6NCI8 922 aa21.96■■□□□ 1.11
VPS36-203ENST00000475375 DHPSP49366 369 aaPredicted RBP21.96■■□□□ 1.11
VPS36-203ENST00000475375 UAP1L1Q3KQV9 507 aa21.96■■□□□ 1.11
VPS36-203ENST00000475375 SFR1Q86XK3 245 aa21.96■■□□□ 1.11
VPS36-203ENST00000475375 TMEM86AQ8N2M4 240 aa21.96■■□□□ 1.11
VPS36-203ENST00000475375 CCDC33Q8N5R6 958 aa21.96■■□□□ 1.11
VPS36-203ENST00000475375 CACTINQ8WUQ7 758 aaKnown RBP21.96■■□□□ 1.11
VPS36-203ENST00000475375 MYRFLQ96LU7 910 aa21.96■■□□□ 1.11
VPS36-203ENST00000475375 ZZEF1O43149 2961 aa21.96■■□□□ 1.11
VPS36-203ENST00000475375 PATE3B3GLJ2 98 aa21.95■■□□□ 1.1
VPS36-203ENST00000475375 NFATC1O95644 943 aa21.95■■□□□ 1.1
VPS36-203ENST00000475375 KRT19P08727 400 aa21.95■■□□□ 1.1
VPS36-203ENST00000475375 HDCP19113 662 aa21.95■■□□□ 1.1
VPS36-203ENST00000475375 CCDC142Q17RM4 750 aa21.95■■□□□ 1.1
VPS36-203ENST00000475375 DYMQ7RTS9 669 aa21.95■■□□□ 1.1
VPS36-203ENST00000475375 CSGALNACT2Q8N6G5 542 aa21.95■■□□□ 1.1
VPS36-203ENST00000475375 USP33Q8TEY7 942 aa21.95■■□□□ 1.1
VPS36-203ENST00000475375 NOC3LQ8WTT2 800 aaKnown RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms