RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 KCNMB3Q9NPA1 279 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 C12orf4Q9NQ89 552 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 CHST12Q9NRB3 414 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 ZNF277Q9NRM2 450 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 PIH1D1Q9NWS0 290 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 MBD2Q9UBB5 411 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 EVLQ9UI08 416 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 TRHDEQ9UKU6 1024 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 ADGRB3O60242 1522 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 CROCC2H7BZ55 1655 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 MROH1Q8NDA8 1641 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 OR5K4A6NMS3 321 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 GOLGA8BA8MQT2 603 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 E9PBE3 544 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 M0R082 166 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 AGPSO00116 658 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 NOP56O00567 594 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ZW10O43264 779 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 EFCAB14O75071 495 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ADAM11O75078 769 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ADAMTS4O75173 837 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 PPM1BO75688 479 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 SERPINC1P01008 464 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 NQO1P15559 274 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 PRKACAP17612 351 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 HPDP32754 393 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 IFNA8P32881 189 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 EVI2BP34910 448 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 PSMC2P35998 433 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 MDH1P40925 334 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ID4P47928 161 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 TRAPPC10P48553 1259 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 PTDSS1P48651 473 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 CACNA2D1P54289 1103 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 KIF23Q02241 960 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 CDK18Q07002 472 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ITIH4Q14624 930 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 R3HDM1Q15032 1099 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 SF1Q15637 639 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 KLHL38Q2WGJ6 581 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ODF2Q5BJF6 829 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 HP1BP3Q5SSJ5 553 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ZNF658Q5TYW1 1059 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 FYB2Q5VWT5 728 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 OLFML2BQ68BL8 750 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ATL3Q6DD88 541 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 FAM122CQ6P4D5 195 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 SLC30A10Q6XR72 485 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 C20orf204Q6ZNR8 217 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ANO5Q75V66 913 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ZBTB46Q86UZ6 589 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 BBS5Q8N3I7 341 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 CNTD1Q8N815 330 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ENAHQ8N8S7 591 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 FAM133AQ8N9E0 248 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 MLKLQ8NB16 471 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ADCY4Q8NFM4 1077 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ZNF417Q8TAU3 575 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ZNF507Q8TCN5 953 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 PLEKHO2Q8TD55 490 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 BTN2A2Q8WVV5 523 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 DNAJC9Q8WXX5 260 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 FAM149B1Q96BN6 582 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 FAM136AQ96C01 138 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 SLC39A13Q96H72 371 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 PGBD1Q96JS3 809 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ZNF587Q96SQ5 575 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 SLF1Q9BQI6 1058 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ALG1Q9BT22 464 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 CRNKL1Q9BZJ0 848 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 CCSER1Q9C0I3 900 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 MKRN2Q9H000 416 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 SUGCTQ9HAC7 445 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 RAD18Q9NS91 495 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 PAG1Q9NWQ8 432 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 SLC39A1Q9NY26 324 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 EHD2Q9NZN4 543 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 KIF17Q9P2E2 1029 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 PGAP2Q9UHJ9 254 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 RPL26L1Q9UNX3 145 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 AKT3Q9Y243 479 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 TMEM5Q9Y2B1 443 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 USP16Q9Y5T5 823 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 MROH7Q68CQ1 1323 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 BCL9O00512 1426 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 RGS12O14924 1447 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 NOS1P29475 1434 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 GMNCA6NCL1 334 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 RSPH10B2B2RC85 870 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 B8ZZF3 427 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 E7EVH7 732 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 GOLGA8RI6L899 631 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 IFRD1O00458 451 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 NEMP1O14524 444 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 GABRDO14764 452 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 APOL1O14791 398 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms