RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 L3MBTL1Q9Y468 752 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 HES2Q9Y543 173 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 PLXNA1Q9UIW2 1896 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 SCN1AP35498 2009 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 PDHXO00330 501 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 IGF2BP3O00425 579 aaKnown RBP eCLIP13.11□□□□□ -0.31
RNF220-211ENST00000474956 ARF4P18085 180 aaPredicted RBP13.11□□□□□ -0.31
RNF220-211ENST00000474956 SH3PXD2AQ5TCZ1 1133 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 LIN9Q5TKA1 542 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 VSTM1Q6UX27 236 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 SPATA21Q7Z572 469 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 CKAP2Q8WWK9 683 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 FAM167AQ96KS9 214 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 SMARCAD1Q9H4L7 1026 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 MLXIPLQ9NP71 852 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 GGT7Q9UJ14 662 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 DNPEPQ9ULA0 475 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 TMEM191CA6NGB0 347 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 BTBD19C9JJ37 291 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 PPEF2O14830 753 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 CD48P09326 243 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 ITIH2P19823 946 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 OSBPP22059 807 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 IL1R2P27930 398 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 TTLL4Q14679 1199 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 KYNUQ16719 465 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 UBA3Q8TBC4 463 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 ZWILCHQ9H900 591 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 CDHR5Q9HBB8 845 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 CLEC11AQ9Y240 323 aa13.11□□□□□ -0.31
RNF220-211ENST00000474956 BANF1O75531 89 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 GAD2Q05329 585 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 DCUN1D2Q6PH85 259 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 CAPN12Q6ZSI9 719 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 RHOT1Q8IXI2 618 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 LRRN4Q8WUT4 740 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 SLC10A4Q96EP9 437 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 THOC1Q96FV9 657 aaKnown RBP13.1□□□□□ -0.31
RNF220-211ENST00000474956 ELOVL4Q9GZR5 314 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 PDZD7Q9H5P4 517 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 RXFP1Q9HBX9 757 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 KCNK9Q9NPC2 374 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 ARHGEF3Q9NR81 526 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 SNAI1O95863 264 aaPredicted RBP13.1□□□□□ -0.31
RNF220-211ENST00000474956 KRT1P04264 644 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 ADCY8P40145 1251 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 KIZQ2M2Z5 673 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 SGSM1Q2NKQ1 1148 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 SLC10A6Q3KNW5 377 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 DNAJC24Q6P3W2 148 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 RHBDF2Q6PJF5 856 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 C12orf29Q8N999 325 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 C9orf72Q96LT7 481 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 PARVAQ9NVD7 372 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 GRAP2O75791 330 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 TTC4O95801 387 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 MYBL1P10243 752 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 CETPP11597 493 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 POLR2BP30876 1174 aaKnown RBP13.1□□□□□ -0.31
RNF220-211ENST00000474956 RAD23BP54727 409 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 ANKRD42Q8N9B4 389 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 CXorf38Q8TB03 319 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 C16orf70Q9BSU1 422 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 RPF1Q9H9Y2 349 aaKnown RBP13.1□□□□□ -0.31
RNF220-211ENST00000474956 ERAP1Q9NZ08 941 aa13.1□□□□□ -0.31
RNF220-211ENST00000474956 HBP1O60381 514 aa13.09□□□□□ -0.31
RNF220-211ENST00000474956 ERBB2P04626 1255 aa13.09□□□□□ -0.31
RNF220-211ENST00000474956 LACTBP83111 547 aaPredicted RBP13.09□□□□□ -0.31
RNF220-211ENST00000474956 C1QBPQ07021 282 aaKnown RBP13.09□□□□□ -0.31
RNF220-211ENST00000474956 NFX1Q12986 1120 aaKnown RBP13.09□□□□□ -0.31
RNF220-211ENST00000474956 SYCP2LQ5T4T6 812 aa13.09□□□□□ -0.31
RNF220-211ENST00000474956 SYDE1Q6ZW31 735 aaPredicted RBP13.09□□□□□ -0.31
RNF220-211ENST00000474956 NLRP7Q8WX94 980 aa13.09□□□□□ -0.31
RNF220-211ENST00000474956 BRI3BPQ8WY22 251 aa13.09□□□□□ -0.31
RNF220-211ENST00000474956 KCNN1Q92952 543 aa13.09□□□□□ -0.31
RNF220-211ENST00000474956 SLITRK1Q96PX8 696 aa13.09□□□□□ -0.31
RNF220-211ENST00000474956 TRIM6Q9C030 488 aaPredicted RBP13.09□□□□□ -0.31
RNF220-211ENST00000474956 FAM49AQ9H0Q0 323 aaPredicted RBP13.09□□□□□ -0.31
RNF220-211ENST00000474956 PRKAG3Q9UGI9 489 aa13.09□□□□□ -0.31
RNF220-211ENST00000474956 PCSK1NQ9UHG2 260 aa13.09□□□□□ -0.31
RNF220-211ENST00000474956 GJD2Q9UKL4 321 aa13.09□□□□□ -0.31
RNF220-211ENST00000474956 NEU2Q9Y3R4 380 aa13.09□□□□□ -0.31
RNF220-211ENST00000474956 MKI67P46013 3256 aaKnown RBP13.09□□□□□ -0.31
RNF220-211ENST00000474956 KAT6AQ92794 2004 aa13.09□□□□□ -0.31
RNF220-211ENST00000474956 KRT16P08779 473 aa13.09□□□□□ -0.31
RNF220-211ENST00000474956 BRAFP15056 766 aa13.09□□□□□ -0.31
RNF220-211ENST00000474956 CYP3A5P20815 502 aa13.09□□□□□ -0.31
RNF220-211ENST00000474956 MAN1A1P33908 653 aa13.09□□□□□ -0.31
RNF220-211ENST00000474956 FASTKD3Q14CZ7 662 aaKnown RBP13.09□□□□□ -0.31
RNF220-211ENST00000474956 ZNF792Q3KQV3 632 aa13.09□□□□□ -0.31
RNF220-211ENST00000474956 GLRA4Q5JXX5 417 aa13.09□□□□□ -0.31
RNF220-211ENST00000474956 MARCH8Q5T0T0 291 aa13.09□□□□□ -0.31
RNF220-211ENST00000474956 ERICH1Q86X53 443 aa13.09□□□□□ -0.31
RNF220-211ENST00000474956 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.09□□□□□ -0.31
RNF220-211ENST00000474956 SNF8Q96H20 258 aa13.09□□□□□ -0.31
RNF220-211ENST00000474956 MS4A4AQ96JQ5 239 aa13.09□□□□□ -0.31
RNF220-211ENST00000474956 TBK1Q9UHD2 729 aa13.09□□□□□ -0.31
RNF220-211ENST00000474956 PLXNB2O15031 1838 aa13.09□□□□□ -0.31
RNF220-211ENST00000474956 LRRD1A4D1F6 860 aa13.08□□□□□ -0.31
RNF220-211ENST00000474956 TCEA3O75764 348 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms