RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 SGMS1Q86VZ5 419 aa8.77□□□□□ -1.01
USP54-211ENST00000474929 CDR2LQ86X02 465 aaPredicted RBP8.77□□□□□ -1.01
USP54-211ENST00000474929 MB21D2Q8IYB1 491 aaPredicted RBP8.77□□□□□ -1.01
USP54-211ENST00000474929 ZCCHC9Q8N567 271 aaKnown RBP8.77□□□□□ -1.01
USP54-211ENST00000474929 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.77□□□□□ -1.01
USP54-211ENST00000474929 CADM4Q8NFZ8 388 aa8.77□□□□□ -1.01
USP54-211ENST00000474929 YTHDC1Q96MU7 727 aaKnown RBP8.77□□□□□ -1.01
USP54-211ENST00000474929 PGLYRP2Q96PD5 576 aa8.77□□□□□ -1.01
USP54-211ENST00000474929 PSMG3-AS1Q96PY0 264 aa8.77□□□□□ -1.01
USP54-211ENST00000474929 PHF12Q96QT6 1004 aa8.77□□□□□ -1.01
USP54-211ENST00000474929 PDZD7Q9H5P4 517 aa8.77□□□□□ -1.01
USP54-211ENST00000474929 LRRC4CQ9HCJ2 640 aa8.77□□□□□ -1.01
USP54-211ENST00000474929 BMP2KQ9NSY1 1161 aaPredicted RBP8.77□□□□□ -1.01
USP54-211ENST00000474929 STARD5Q9NSY2 213 aa8.77□□□□□ -1.01
USP54-211ENST00000474929 UXTQ9UBK9 157 aaPredicted RBP8.77□□□□□ -1.01
USP54-211ENST00000474929 CCL26Q9Y258 94 aa8.77□□□□□ -1.01
USP54-211ENST00000474929 MAN2B2Q9Y2E5 1009 aa8.77□□□□□ -1.01
USP54-211ENST00000474929 E2F8A0AVK6 867 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 MTMR11A4FU01 709 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 CLEC18AA5D8T8 446 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 K7ENP7 123 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 USP17L7P0C7H9 530 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 HNRNPLP14866 589 aaKnown RBP eCLIP8.76□□□□□ -1.013e-8■■■■□ 26.7
USP54-211ENST00000474929 GABRG2P18507 467 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 MCM5P33992 734 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 OPRD1P41143 372 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 GRIA2P42262 883 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 TNFRSF4P43489 277 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 AFF3P51826 1226 aaKnown RBP8.76□□□□□ -1.01
USP54-211ENST00000474929 ANTXR2P58335 489 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 ASIC1P78348 528 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 SMARCB1Q12824 385 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 MYO1EQ12965 1108 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 PRPF4BQ13523 1007 aaKnown RBP8.76□□□□□ -1.01
USP54-211ENST00000474929 INF2Q27J81 1249 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 CDCA2Q69YH5 1023 aaPredicted RBP8.76□□□□□ -1.01
USP54-211ENST00000474929 ARMCX5Q6P1M9 558 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 INO80CQ6PI98 192 aaPredicted RBP8.76□□□□□ -1.01
USP54-211ENST00000474929 CLEC18BQ6UXF7 455 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 MON1AQ86VX9 555 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 MICU3Q86XE3 530 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 EFCAB13Q8IY85 973 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 DEFB119Q8N690 84 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 MAB21L3Q8N8X9 362 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 CLEC18CQ8NCF0 446 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 CCDC148Q8NFR7 591 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 C2orf15Q8WU43 125 aaKnown RBP8.76□□□□□ -1.01
USP54-211ENST00000474929 IGSF8Q969P0 613 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 HIC2Q96JB3 615 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 PNKPQ96T60 521 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 LPIN3Q9BQK8 851 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 CCDC94Q9BW85 323 aaPredicted RBP8.76□□□□□ -1.01
USP54-211ENST00000474929 PCED1AQ9H1Q7 454 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 IL21Q9HBE4 155 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 IL21RQ9HBE5 538 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 GOLGA2P5Q9HBQ8 144 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 CYP8B1Q9UNU6 501 aa8.76□□□□□ -1.01
USP54-211ENST00000474929 TLN1Q9Y490 2541 aaKnown RBP8.76□□□□□ -1.01
USP54-211ENST00000474929 TRAV19A0A0A6YYK7 116 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 SMIM28A0A1B0GU29 152 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 LRRIQ4A6NIV6 560 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 SH2B2O14492 632 aaPredicted RBP8.75□□□□□ -1.01
USP54-211ENST00000474929 ENC1O14682 589 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 KLK10O43240 276 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 PRC1O43663 620 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 DXOO77932 396 aaKnown RBP8.75□□□□□ -1.01
USP54-211ENST00000474929 KAT7O95251 611 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 MYF5P13349 255 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 HOXB2P14652 356 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 RXRAP19793 462 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 PAX3P23760 479 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 KIR2DL1P43626 348 aaPredicted RBP8.75□□□□□ -1.01
USP54-211ENST00000474929 PPP2R5CQ13362 524 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 SDE2Q6IQ49 451 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 MOXD1Q6UVY6 613 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 DHX32Q7L7V1 743 aaKnown RBP8.75□□□□□ -1.01
USP54-211ENST00000474929 DRC1Q96MC2 740 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 SEPT5Q99719 369 aaPredicted RBP8.75□□□□□ -1.01
USP54-211ENST00000474929 ARHGAP9Q9BRR9 750 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 LXNQ9BS40 222 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 MIR1-1HGQ9H1L0 117 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 FZD8Q9H461 694 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 ZSWIM4Q9H7M6 989 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 THSD1Q9NS62 852 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 GMIPQ9P107 970 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 BTBD3Q9Y2F9 522 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 GDAQ9Y2T3 454 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 WNT6Q9Y6F9 365 aa8.75□□□□□ -1.01
USP54-211ENST00000474929 CABIN1Q9Y6J0 2220 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 DENND4CQ5VZ89 1909 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 A0A0A0MRY4 1105 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 M0QZQ0 153 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 SLC9A3R1O14745 358 aaPredicted RBP8.74□□□□□ -1.01
USP54-211ENST00000474929 YKT6O15498 198 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 ADH1CP00326 375 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 CKMP06732 381 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 CSH1P0DML2 217 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 CSH2P0DML3 217 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 NCAM1P13591 858 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 PFKLP17858 780 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms