RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 CPNE8Q86YQ8 564 aa22.32■■□□□ 1.16
SH3D21-202ENST00000474766 TRPV1Q8NER1 839 aa22.32■■□□□ 1.16
SH3D21-202ENST00000474766 KCNV2Q8TDN2 545 aa22.32■■□□□ 1.16
SH3D21-202ENST00000474766 ASAP3Q8TDY4 903 aa22.32■■□□□ 1.16
SH3D21-202ENST00000474766 PSPC1Q8WXF1 523 aaKnown RBP22.32■■□□□ 1.16
SH3D21-202ENST00000474766 PI4K2AQ9BTU6 479 aa22.32■■□□□ 1.16
SH3D21-202ENST00000474766 PITPNM3Q9BZ71 974 aa22.32■■□□□ 1.16
SH3D21-202ENST00000474766 MAFBQ9Y5Q3 323 aaPredicted RBP22.32■■□□□ 1.16
SH3D21-202ENST00000474766 USH1CQ9Y6N9 552 aa22.32■■□□□ 1.16
SH3D21-202ENST00000474766 MYH9P35579 1960 aaKnown RBP22.32■■□□□ 1.16
SH3D21-202ENST00000474766 TRAFD1O14545 582 aaPredicted RBP22.31■■□□□ 1.16
SH3D21-202ENST00000474766 ICAM3P32942 547 aa22.31■■□□□ 1.16
SH3D21-202ENST00000474766 MAN1A1P33908 653 aa22.31■■□□□ 1.16
SH3D21-202ENST00000474766 RAD23BP54727 409 aa22.31■■□□□ 1.16
SH3D21-202ENST00000474766 EMC2Q15006 297 aa22.31■■□□□ 1.16
SH3D21-202ENST00000474766 RGS9BPQ6ZS82 235 aa22.31■■□□□ 1.16
SH3D21-202ENST00000474766 GDAP1Q8TB36 358 aa22.31■■□□□ 1.16
SH3D21-202ENST00000474766 ELMO3Q96BJ8 720 aa22.31■■□□□ 1.16
SH3D21-202ENST00000474766 ASB3Q9Y575 518 aa22.31■■□□□ 1.16
SH3D21-202ENST00000474766 DCTN3O75935 186 aa22.31■■□□□ 1.16
SH3D21-202ENST00000474766 ACSL3O95573 720 aa22.31■■□□□ 1.16
SH3D21-202ENST00000474766 CCND3P30281 292 aaPredicted RBP22.31■■□□□ 1.16
SH3D21-202ENST00000474766 PCK1P35558 622 aa22.31■■□□□ 1.16
SH3D21-202ENST00000474766 LIG4P49917 911 aa22.31■■□□□ 1.16
SH3D21-202ENST00000474766 RAB27AP51159 221 aa22.31■■□□□ 1.16
SH3D21-202ENST00000474766 ZACNQ401N2 412 aa22.31■■□□□ 1.16
SH3D21-202ENST00000474766 MTERF2Q49AM1 385 aa22.31■■□□□ 1.16
SH3D21-202ENST00000474766 PRAMEF19Q5SWL8 479 aa22.31■■□□□ 1.16
SH3D21-202ENST00000474766 MAMDC4Q6UXC1 1216 aa22.31■■□□□ 1.16
SH3D21-202ENST00000474766 ZNF677Q86XU0 584 aa22.31■■□□□ 1.16
SH3D21-202ENST00000474766 RNF208Q9H0X6 261 aa22.31■■□□□ 1.16
SH3D21-202ENST00000474766 MYLK2Q9H1R3 596 aa22.31■■□□□ 1.16
SH3D21-202ENST00000474766 PAPOLBQ9NRJ5 636 aaKnown RBP22.31■■□□□ 1.16
SH3D21-202ENST00000474766 C1orf112Q9NSG2 853 aa22.31■■□□□ 1.16
SH3D21-202ENST00000474766 TP73O15350 636 aa22.3■■□□□ 1.16
SH3D21-202ENST00000474766 CDH16O75309 829 aa22.3■■□□□ 1.16
SH3D21-202ENST00000474766 PIGRP01833 764 aa22.3■■□□□ 1.16
SH3D21-202ENST00000474766 CYBAP13498 195 aa22.3■■□□□ 1.16
SH3D21-202ENST00000474766 KRT5P13647 590 aa22.3■■□□□ 1.16
SH3D21-202ENST00000474766 EDNRBP24530 442 aa22.3■■□□□ 1.16
SH3D21-202ENST00000474766 KLC1Q07866 573 aa22.3■■□□□ 1.16
SH3D21-202ENST00000474766 VSIG1Q86XK7 387 aa22.3■■□□□ 1.16
SH3D21-202ENST00000474766 RIBC1Q8N443 379 aaPredicted RBP22.3■■□□□ 1.16
SH3D21-202ENST00000474766 DHX33Q9H6R0 707 aaKnown RBP22.3■■□□□ 1.16
SH3D21-202ENST00000474766 AVENQ9NQS1 362 aaPredicted RBP22.3■■□□□ 1.16
SH3D21-202ENST00000474766 PCDHB2Q9Y5E7 798 aa22.3■■□□□ 1.16
SH3D21-202ENST00000474766 FRMPD3Q5JV73 1810 aa22.3■■□□□ 1.16
SH3D21-202ENST00000474766 TCRBV7S2A1N4TA0A589 114 aa22.3■■□□□ 1.16
SH3D21-202ENST00000474766 HNRNPCL1O60812 293 aaKnown RBP22.3■■□□□ 1.16
SH3D21-202ENST00000474766 SNAI1O95863 264 aaPredicted RBP22.3■■□□□ 1.16
SH3D21-202ENST00000474766 C4BPAP04003 597 aaKnown RBP22.3■■□□□ 1.16
SH3D21-202ENST00000474766 SLC18A1P54219 525 aa22.3■■□□□ 1.16
SH3D21-202ENST00000474766 MXRA7P84157 204 aa22.3■■□□□ 1.16
SH3D21-202ENST00000474766 THEMIS2Q5TEJ8 643 aa22.3■■□□□ 1.16
SH3D21-202ENST00000474766 FAM13CQ8NE31 585 aa22.3■■□□□ 1.16
SH3D21-202ENST00000474766 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.3■■□□□ 1.162e-7■■■□□ 15.2
SH3D21-202ENST00000474766 PAK6Q9NQU5 681 aaPredicted RBP22.3■■□□□ 1.16
SH3D21-202ENST00000474766 MROH7Q68CQ1 1323 aa22.29■■□□□ 1.16
SH3D21-202ENST00000474766 GH1P01241 217 aa22.29■■□□□ 1.16
SH3D21-202ENST00000474766 ALDH3A1P30838 453 aa22.29■■□□□ 1.16
SH3D21-202ENST00000474766 NR1H3Q13133 447 aa22.29■■□□□ 1.16
SH3D21-202ENST00000474766 STXBP2Q15833 593 aa22.29■■□□□ 1.16
SH3D21-202ENST00000474766 TRIM68Q6AZZ1 485 aa22.29■■□□□ 1.16
SH3D21-202ENST00000474766 ARMCX2Q7L311 632 aa22.29■■□□□ 1.16
SH3D21-202ENST00000474766 RELL1Q8IUW5 271 aa22.29■■□□□ 1.16
SH3D21-202ENST00000474766 MCOLN2Q8IZK6 566 aa22.29■■□□□ 1.16
SH3D21-202ENST00000474766 GALNT15Q8N3T1 639 aa22.29■■□□□ 1.16
SH3D21-202ENST00000474766 SNF8Q96H20 258 aa22.29■■□□□ 1.16
SH3D21-202ENST00000474766 FAM84AQ96KN4 292 aa22.29■■□□□ 1.16
SH3D21-202ENST00000474766 LRRC37BQ96QE4 947 aa22.29■■□□□ 1.16
SH3D21-202ENST00000474766 NUDCD1Q96RS6 583 aa22.29■■□□□ 1.16
SH3D21-202ENST00000474766 CCDC77Q9BR77 488 aa22.29■■□□□ 1.16
SH3D21-202ENST00000474766 PLVAPQ9BX97 442 aa22.29■■□□□ 1.16
SH3D21-202ENST00000474766 HMX1Q9NP08 348 aaPredicted RBP22.29■■□□□ 1.16
SH3D21-202ENST00000474766 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.29■■□□□ 1.161e-6■■■□□ 17.8
SH3D21-202ENST00000474766 SMIM24O75264 130 aa22.28■■□□□ 1.16
SH3D21-202ENST00000474766 WNT7BP56706 349 aa22.28■■□□□ 1.16
SH3D21-202ENST00000474766 BPIFB4P59827 614 aa22.28■■□□□ 1.16
SH3D21-202ENST00000474766 TLE6Q9H808 572 aa22.28■■□□□ 1.16
SH3D21-202ENST00000474766 UBN1Q9NPG3 1134 aa22.28■■□□□ 1.16
SH3D21-202ENST00000474766 ZNF302Q9NR11 478 aa22.28■■□□□ 1.16
SH3D21-202ENST00000474766 AGO2Q9UKV8 859 aaKnown RBP22.28■■□□□ 1.16
SH3D21-202ENST00000474766 MKI67P46013 3256 aaKnown RBP22.28■■□□□ 1.16
SH3D21-202ENST00000474766 FSCN2O14926 492 aa22.28■■□□□ 1.16
SH3D21-202ENST00000474766 SORBS3O60504 671 aa22.28■■□□□ 1.16
SH3D21-202ENST00000474766 HLA-DRAP01903 254 aa22.28■■□□□ 1.16
SH3D21-202ENST00000474766 OATP04181 439 aa22.28■■□□□ 1.16
SH3D21-202ENST00000474766 MYBL1P10243 752 aa22.28■■□□□ 1.16
SH3D21-202ENST00000474766 ARL2P36404 184 aa22.28■■□□□ 1.16
SH3D21-202ENST00000474766 NAMPTP43490 491 aa22.28■■□□□ 1.16
SH3D21-202ENST00000474766 NLRP11P59045 1033 aaKnown RBP22.28■■□□□ 1.16
SH3D21-202ENST00000474766 PTK6Q13882 451 aa22.28■■□□□ 1.16
SH3D21-202ENST00000474766 STAT4Q14765 748 aa22.28■■□□□ 1.16
SH3D21-202ENST00000474766 WDR44Q5JSH3 913 aa22.28■■□□□ 1.16
SH3D21-202ENST00000474766 TDRD10Q5VZ19 366 aaKnown RBP22.28■■□□□ 1.16
SH3D21-202ENST00000474766 IRGCQ6NXR0 463 aa22.28■■□□□ 1.16
SH3D21-202ENST00000474766 RBBP8NLQ8NC74 664 aaPredicted RBP22.28■■□□□ 1.16
SH3D21-202ENST00000474766 MAIP1Q8WWC4 291 aa22.28■■□□□ 1.16
SH3D21-202ENST00000474766 TMEM143Q96AN5 459 aa22.28■■□□□ 1.16
SH3D21-202ENST00000474766 ERP27Q96DN0 273 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms