RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 BDNFP23560 247 aa13.21□□□□□ -0.29
DDX56-209ENST00000473924 GRIK1P39086 918 aa13.21□□□□□ -0.29
DDX56-209ENST00000473924 FKBP15Q5T1M5 1219 aa13.21□□□□□ -0.29
DDX56-209ENST00000473924 TRIM65Q6PJ69 517 aa13.21□□□□□ -0.29
DDX56-209ENST00000473924 ITIH5Q86UX2 942 aa13.21□□□□□ -0.29
DDX56-209ENST00000473924 ARHGEF19Q8IW93 802 aa13.21□□□□□ -0.29
DDX56-209ENST00000473924 CRYBG2Q8N1P7 616 aa13.21□□□□□ -0.29
DDX56-209ENST00000473924 HEXIM2Q96MH2 286 aaKnown RBP13.21□□□□□ -0.29
DDX56-209ENST00000473924 CORO1BQ9BR76 489 aa13.21□□□□□ -0.29
DDX56-209ENST00000473924 PHF7Q9BWX1 381 aaPredicted RBP13.21□□□□□ -0.29
DDX56-209ENST00000473924 CBX8Q9HC52 389 aa13.21□□□□□ -0.29
DDX56-209ENST00000473924 WDR6Q9NNW5 1121 aaKnown RBP13.21□□□□□ -0.29
DDX56-209ENST00000473924 UBE2TQ9NPD8 197 aaPredicted RBP13.21□□□□□ -0.29
DDX56-209ENST00000473924 FAM49BQ9NUQ9 324 aa13.21□□□□□ -0.29
DDX56-209ENST00000473924 HCFC1R1Q9NWW0 138 aa13.21□□□□□ -0.29
DDX56-209ENST00000473924 CEP72Q9P209 647 aa13.21□□□□□ -0.29
DDX56-209ENST00000473924 LIMA1Q9UHB6 759 aaKnown RBP13.21□□□□□ -0.29
DDX56-209ENST00000473924 XIRP2A4UGR9 3374 aa13.21□□□□□ -0.3
DDX56-209ENST00000473924 C2orf16Q68DN1 1984 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 CLDN5O00501 218 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 PAPLNO95428 1278 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 ZNF18P17022 549 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 SP100P23497 879 aaPredicted RBP13.2□□□□□ -0.3
DDX56-209ENST00000473924 FSHRP23945 695 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 PON1P27169 355 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 ANXA13P27216 316 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 MAGEA11P43364 429 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 COPB1P53618 953 aaKnown RBP13.2□□□□□ -0.3
DDX56-209ENST00000473924 MFAP3P55082 362 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 NTHL1P78549 312 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 GCNT1Q02742 428 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 IQCB1Q15051 598 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 DDR2Q16832 855 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 PABPC1LQ4VXU2 614 aaKnown RBP13.2□□□□□ -0.3
DDX56-209ENST00000473924 CYP4A22Q5TCH4 519 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 PHLDB3Q6NSJ2 640 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 VSTM1Q6UX27 236 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 C12orf29Q8N999 325 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 GPR152Q8TDT2 470 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 WHAMMQ8TF30 809 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 GIPC2Q8TF65 315 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 KAT5Q92993 513 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 TMEM176AQ96HP8 235 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 RPGRIP1Q96KN7 1286 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 FAM81BQ96LP2 452 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 TWNKQ96RR1 684 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 B3GNT5Q9BYG0 378 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 ELOVL4Q9GZR5 314 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 ASAH2Q9NR71 780 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 DNMT3BQ9UBC3 853 aaKnown RBP13.2□□□□□ -0.3
DDX56-209ENST00000473924 PRKAG3Q9UGI9 489 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 NR2E1Q9Y466 385 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 ASB3Q9Y575 518 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 PCDHB4Q9Y5E5 795 aa13.2□□□□□ -0.3
DDX56-209ENST00000473924 TRIM66O15016 1216 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 RHOP08100 348 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 MYL4P12829 197 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 ATP1A3P13637 1013 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 CCDC130P13994 396 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 ATF6P18850 670 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 ADORA2BP29275 332 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 GPR15P49685 360 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 RAD23BP54727 409 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 SDHAF4Q5VUM1 108 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 TMEM270Q6UE05 265 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 LRSAM1Q6UWE0 723 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 PDZD4Q76G19 769 aaPredicted RBP13.19□□□□□ -0.3
DDX56-209ENST00000473924 GET4Q7L5D6 327 aaPredicted RBP13.19□□□□□ -0.3
DDX56-209ENST00000473924 ENOSF1Q7L5Y1 443 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 OTOP3Q7RTS5 596 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 FAM35AQ86V20 835 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 LUZP1Q86V48 1076 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 ADHFE1Q8IWW8 467 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 LEMD2Q8NC56 503 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 SLC2A14Q8TDB8 520 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 ADAMTS19Q8TE59 1207 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 PSMG2Q969U7 264 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 ACSF2Q96CM8 615 aaPredicted RBP13.19□□□□□ -0.3
DDX56-209ENST00000473924 CYFIP2Q96F07 1278 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 PCMTD1Q96MG8 357 aaPredicted RBP13.19□□□□□ -0.3
DDX56-209ENST00000473924 ZNF518BQ9C0D4 1074 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 HSD3B7Q9H2F3 369 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 TSPY26PQ9H489 355 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 APEX2Q9UBZ4 518 aa13.19□□□□□ -0.3
DDX56-209ENST00000473924 MRPS23Q9Y3D9 190 aaKnown RBP13.19□□□□□ -0.3
DDX56-209ENST00000473924 TCF20Q9UGU0 1960 aaKnown RBP13.19□□□□□ -0.3
DDX56-209ENST00000473924 ZNF197O14709 1029 aa13.18□□□□□ -0.3
DDX56-209ENST00000473924 AP1G2O75843 785 aa13.18□□□□□ -0.3
DDX56-209ENST00000473924 CSH1P0DML2 217 aa13.18□□□□□ -0.3
DDX56-209ENST00000473924 CSH2P0DML3 217 aa13.18□□□□□ -0.3
DDX56-209ENST00000473924 KRT5P13647 590 aa13.18□□□□□ -0.3
DDX56-209ENST00000473924 CD19P15391 556 aa13.18□□□□□ -0.3
DDX56-209ENST00000473924 GBP2P32456 591 aaPredicted RBP13.18□□□□□ -0.3
DDX56-209ENST00000473924 SSTR3P32745 418 aaPredicted RBP13.18□□□□□ -0.3
DDX56-209ENST00000473924 APBA1Q02410 837 aa13.18□□□□□ -0.3
DDX56-209ENST00000473924 UBXN1Q04323 297 aa13.18□□□□□ -0.3
DDX56-209ENST00000473924 ARHGAP44Q17R89 818 aa13.18□□□□□ -0.3
DDX56-209ENST00000473924 FILIP1LQ4L180 1135 aa13.18□□□□□ -0.3
DDX56-209ENST00000473924 GJB7Q6PEY0 223 aa13.18□□□□□ -0.3
DDX56-209ENST00000473924 DNAJB7Q7Z6W7 309 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms