RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 WDR44Q5JSH3 913 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 C9orf57Q5W0N0 161 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 RNF43Q68DV7 783 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 TRIM68Q6AZZ1 485 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 MCTP1Q6DN14 999 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 JADE1Q6IE81 842 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 SASS6Q6UVJ0 657 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 KBTBD6Q86V97 674 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 CMTM8Q8IZV2 173 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 TMEM130Q8N3G9 435 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 MYCT1Q8N699 235 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 MAB21L3Q8N8X9 362 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 TTC16Q8NEE8 873 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 OR10T2Q8NGX3 314 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 RASSF8Q8NHQ8 419 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 SPPL2BQ8TCT7 592 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 KCNV2Q8TDN2 545 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 GIPC2Q8TF65 315 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 MRPS31Q92665 395 aaKnown RBP7.47□□□□□ -1.21
CKS1B-205ENST00000473344 ZSCAN31Q96LW9 406 aaPredicted RBP7.47□□□□□ -1.21
CKS1B-205ENST00000473344 PYM1Q9BRP8 204 aaKnown RBP7.47□□□□□ -1.21
CKS1B-205ENST00000473344 MMTAG2Q9BU76 263 aaKnown RBP7.47□□□□□ -1.21
CKS1B-205ENST00000473344 SLC46A2Q9BY10 475 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 HAPLN2Q9GZV7 340 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 ZHX3Q9H4I2 956 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 EBF3Q9H4W6 596 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 RXFP3Q9NSD7 469 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 TDP1Q9NUW8 608 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 ABI2Q9NYB9 513 aaPredicted RBP7.47□□□□□ -1.21
CKS1B-205ENST00000473344 ODF2LQ9ULJ1 636 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 TBX20Q9UMR3 447 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 KIF3AQ9Y496 699 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 DOCK6Q96HP0 2047 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 NPHP3-ACAD11A0A0J9YXS1 232 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 VWA3AA6NCI4 1184 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 CYB561D2O14569 222 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 PPEF2O14830 753 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 FAM13AO94988 1023 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 CD2BP2O95400 341 aaKnown RBP7.46□□□□□ -1.22
CKS1B-205ENST00000473344 CYP11A1P05108 521 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 ATF6P18850 670 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 PMLP29590 882 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 NMT1P30419 496 aaKnown RBP7.46□□□□□ -1.22
CKS1B-205ENST00000473344 HOXC13P31276 330 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 GBP1P32455 592 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 TAF6P49848 677 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 SLC12A3P55017 1021 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 SHC2P98077 582 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 CREB5Q02930 508 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 PSMD2Q13200 908 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 DHX8Q14562 1220 aaKnown RBP7.46□□□□□ -1.22
CKS1B-205ENST00000473344 IL17AQ16552 155 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 FBXO43Q4G163 708 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 RILPL1Q5EBL4 403 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 HYIQ5T013 277 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 ADALQ6DHV7 355 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 PSAPL1Q6NUJ1 521 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 PKN3Q6P5Z2 889 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 DCP1BQ8IZD4 617 aaKnown RBP7.46□□□□□ -1.22
CKS1B-205ENST00000473344 CPA6Q8N4T0 437 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 CCDC26Q8TAB7 109 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 CALML4Q96GE6 196 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 ZC3H10Q96K80 434 aaKnown RBP7.46□□□□□ -1.22
CKS1B-205ENST00000473344 HHIPQ96QV1 700 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 SPSB2Q99619 263 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 FAM83CQ9BQN1 747 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 EDEM2Q9BV94 578 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 ZCWPW1Q9H0M4 648 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 SMOC1Q9H4F8 434 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 ASB7Q9H672 318 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 KIF9Q9HAQ2 790 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 PARVGQ9HBI0 331 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 SH2B1Q9NRF2 756 aaPredicted RBP7.46□□□□□ -1.22
CKS1B-205ENST00000473344 CPSF3Q9UKF6 684 aaKnown RBP7.46□□□□□ -1.22
CKS1B-205ENST00000473344 MAGED2Q9UNF1 606 aaPredicted RBP7.46□□□□□ -1.22
CKS1B-205ENST00000473344 DERAQ9Y315 318 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 PCDHB5Q9Y5E4 795 aa7.46□□□□□ -1.22
CKS1B-205ENST00000473344 A0A0B4J269 797 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 CCDC66A2RUB6 948 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 KPNA7A9QM74 516 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 PIRO00625 290 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 TRDMT1O14717 391 aaKnown RBP7.45□□□□□ -1.22
CKS1B-205ENST00000473344 TM4SF5O14894 197 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 TBCAO75347 108 aaKnown RBP7.45□□□□□ -1.22
CKS1B-205ENST00000473344 PRPF40AO75400 957 aaKnown RBP7.45□□□□□ -1.22
CKS1B-205ENST00000473344 KCNK5O95279 499 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 APBB3O95704 486 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 CAVIN2O95810 425 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 EGFP01133 1207 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 PIGRP01833 764 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 CKMP06732 381 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 NFICP08651 508 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 CSH1P0DML2 217 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 CSH2P0DML3 217 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 HAPLN1P10915 354 aaPredicted RBP7.45□□□□□ -1.22
CKS1B-205ENST00000473344 UBA7P41226 1012 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 ACOT2P49753 483 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 GALK1P51570 392 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 DGKEP52429 567 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 NLRP12P59046 1061 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms