RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 UBE4BO95155 1302 aa17.87■□□□□ 0.45
USP40-212ENST00000473191 MAN2B1O00754 1011 aa17.86■□□□□ 0.45
USP40-212ENST00000473191 DPYSL4O14531 572 aa17.86■□□□□ 0.45
USP40-212ENST00000473191 FGF19O95750 216 aa17.86■□□□□ 0.45
USP40-212ENST00000473191 LMNAP02545 664 aaKnown RBP17.86■□□□□ 0.45
USP40-212ENST00000473191 SLFN14P0C7P3 912 aa17.86■□□□□ 0.45
USP40-212ENST00000473191 LHX1P48742 406 aa17.86■□□□□ 0.45
USP40-212ENST00000473191 KPNA1P52294 538 aaPredicted RBP17.86■□□□□ 0.45
USP40-212ENST00000473191 MYO1EQ12965 1108 aa17.86■□□□□ 0.45
USP40-212ENST00000473191 SURF1Q15526 300 aa17.86■□□□□ 0.45
USP40-212ENST00000473191 Q6ZS52 159 aa17.86■□□□□ 0.45
USP40-212ENST00000473191 SPATA2LQ8IUW3 424 aaPredicted RBP17.86■□□□□ 0.45
USP40-212ENST00000473191 SCN4BQ8IWT1 228 aa17.86■□□□□ 0.45
USP40-212ENST00000473191 CEP57L1Q8IYX8 460 aa17.86■□□□□ 0.45
USP40-212ENST00000473191 CSGALNACT1Q8TDX6 532 aa17.86■□□□□ 0.45
USP40-212ENST00000473191 CYP2S1Q96SQ9 504 aa17.86■□□□□ 0.45
USP40-212ENST00000473191 MMS19Q96T76 1030 aa17.86■□□□□ 0.45
USP40-212ENST00000473191 SYT15Q9BQS2 421 aa17.86■□□□□ 0.45
USP40-212ENST00000473191 CHRDQ9H2X0 955 aa17.86■□□□□ 0.45
USP40-212ENST00000473191 KIAA1586Q9HCI6 787 aa17.86■□□□□ 0.45
USP40-212ENST00000473191 PRMT8Q9NR22 394 aaPredicted RBP17.86■□□□□ 0.45
USP40-212ENST00000473191 TMEM30AQ9NV96 361 aa17.86■□□□□ 0.45
USP40-212ENST00000473191 FBXO4Q9UKT5 387 aa17.86■□□□□ 0.45
USP40-212ENST00000473191 MRPS17Q9Y2R5 130 aaKnown RBP17.86■□□□□ 0.45
USP40-212ENST00000473191 SPECC1L-ADORA2AF8WAN1 911 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 NCAM2O15394 837 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 NOL4O94818 638 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 CSH1P0DML2 217 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 CSH2P0DML3 217 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 TDGF1P13385 188 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 PDIA4P13667 645 aaKnown RBP17.85■□□□□ 0.45
USP40-212ENST00000473191 WARSP23381 471 aaKnown RBP17.85■□□□□ 0.45
USP40-212ENST00000473191 BDNFP23560 247 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 CTHP32929 405 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 CACNA2D1P54289 1103 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 MYL6P60660 151 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 USP46P62068 366 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 DLG4P78352 724 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 SATB1Q01826 763 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 PON2Q15165 354 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 CFAP221Q4G0U5 840 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 GREB1Q4ZG55 1949 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 C12orf56Q8IXR9 622 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 SUMF1Q8NBK3 374 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 NELL1Q92832 810 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 PCED1BQ96HM7 432 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 DCHS1Q96JQ0 3298 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 GCNAQ96QF7 691 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 FNBP1Q96RU3 617 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 XYLT2Q9H1B5 865 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 ABCB6Q9NP58 842 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 HPS4Q9NQG7 708 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 OBP2AQ9NY56 170 aa17.85■□□□□ 0.45
USP40-212ENST00000473191 PTPRDP23468 1912 aa17.84■□□□□ 0.45
USP40-212ENST00000473191 LRRIQ3A6PVS8 624 aaPredicted RBP17.84■□□□□ 0.45
USP40-212ENST00000473191 EXOC3O60645 756 aa17.84■□□□□ 0.45
USP40-212ENST00000473191 CMA1P23946 247 aa17.84■□□□□ 0.45
USP40-212ENST00000473191 PCSK1P29120 753 aa17.84■□□□□ 0.45
USP40-212ENST00000473191 WEE1P30291 646 aa17.84■□□□□ 0.45
USP40-212ENST00000473191 MAGEA9P43362 315 aa17.84■□□□□ 0.45
USP40-212ENST00000473191 NDUFA8P51970 172 aa17.84■□□□□ 0.45
USP40-212ENST00000473191 DMWDQ09019 674 aa17.84■□□□□ 0.45
USP40-212ENST00000473191 ZNF528Q3MIS6 628 aa17.84■□□□□ 0.45
USP40-212ENST00000473191 ARHGAP29Q52LW3 1261 aa17.84■□□□□ 0.45
USP40-212ENST00000473191 TDRD10Q5VZ19 366 aaKnown RBP17.84■□□□□ 0.45
USP40-212ENST00000473191 NAIF1Q69YI7 327 aaPredicted RBP17.84■□□□□ 0.45
USP40-212ENST00000473191 DPH6Q7L8W6 267 aa17.84■□□□□ 0.45
USP40-212ENST00000473191 HS2ST1Q7LGA3 356 aa17.84■□□□□ 0.45
USP40-212ENST00000473191 SPATA32Q96LK8 384 aa17.84■□□□□ 0.45
USP40-212ENST00000473191 KCTD10Q9H3F6 313 aa17.84■□□□□ 0.45
USP40-212ENST00000473191 GOLPH3LQ9H4A5 285 aa17.84■□□□□ 0.45
USP40-212ENST00000473191 EBF3Q9H4W6 596 aa17.84■□□□□ 0.45
USP40-212ENST00000473191 GDPD2Q9HCC8 539 aa17.84■□□□□ 0.45
USP40-212ENST00000473191 GKN1Q9NS71 199 aa17.84■□□□□ 0.45
USP40-212ENST00000473191 CDH9Q9ULB4 789 aa17.84■□□□□ 0.45
USP40-212ENST00000473191 ANAPC1Q9H1A4 1944 aa17.83■□□□□ 0.44
USP40-212ENST00000473191 C2orf78A6NCI8 922 aa17.83■□□□□ 0.44
USP40-212ENST00000473191 ARSAP15289 507 aa17.83■□□□□ 0.44
USP40-212ENST00000473191 RAP1GAPP47736 663 aa17.83■□□□□ 0.44
USP40-212ENST00000473191 CDH8P55286 799 aa17.83■□□□□ 0.44
USP40-212ENST00000473191 RPL10AP62906 217 aaKnown RBP17.83■□□□□ 0.44
USP40-212ENST00000473191 CYP27A1Q02318 531 aa17.83■□□□□ 0.44
USP40-212ENST00000473191 WDR72Q3MJ13 1102 aa17.83■□□□□ 0.44
USP40-212ENST00000473191 MDH1BQ5I0G3 518 aa17.83■□□□□ 0.44
USP40-212ENST00000473191 MON1AQ86VX9 555 aa17.83■□□□□ 0.44
USP40-212ENST00000473191 CELF5Q8N6W0 485 aaKnown RBP17.83■□□□□ 0.44
USP40-212ENST00000473191 ZBTB44Q8NCP5 570 aa17.83■□□□□ 0.44
USP40-212ENST00000473191 TTC16Q8NEE8 873 aa17.83■□□□□ 0.44
USP40-212ENST00000473191 SPATA18Q8TC71 538 aa17.83■□□□□ 0.44
USP40-212ENST00000473191 MYRFLQ96LU7 910 aa17.83■□□□□ 0.44
USP40-212ENST00000473191 FAM83CQ9BQN1 747 aa17.83■□□□□ 0.44
USP40-212ENST00000473191 SDCBP2Q9H190 292 aa17.83■□□□□ 0.44
USP40-212ENST00000473191 TRPC7Q9HCX4 862 aa17.83■□□□□ 0.44
USP40-212ENST00000473191 DMAC2Q9NW81 257 aa17.83■□□□□ 0.44
USP40-212ENST00000473191 MAGEC2Q9UBF1 373 aaPredicted RBP17.83■□□□□ 0.44
USP40-212ENST00000473191 NXF1Q9UBU9 619 aaKnown RBP17.83■□□□□ 0.44
USP40-212ENST00000473191 R3HCC1Q9Y3T6 440 aaKnown RBP17.83■□□□□ 0.44
USP40-212ENST00000473191 ZNF638Q14966 1978 aaKnown RBP17.82■□□□□ 0.44
USP40-212ENST00000473191 CLDN5O00501 218 aa17.82■□□□□ 0.44
USP40-212ENST00000473191 LILRB5O75023 590 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms