RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 CYP2F1P24903 491 aa15.12■□□□□ 0.01
BRCA1-211ENST00000472490 EEF1GP26641 437 aaKnown RBP15.12■□□□□ 0.01
BRCA1-211ENST00000472490 ANXA13P27216 316 aa15.12■□□□□ 0.01
BRCA1-211ENST00000472490 GRIK1P39086 918 aa15.12■□□□□ 0.01
BRCA1-211ENST00000472490 EPHA5P54756 1037 aa15.12■□□□□ 0.01
BRCA1-211ENST00000472490 TYRO3Q06418 890 aa15.12■□□□□ 0.01
BRCA1-211ENST00000472490 CUL2Q13617 745 aa15.12■□□□□ 0.01
BRCA1-211ENST00000472490 MAN2A1Q16706 1144 aa15.12■□□□□ 0.01
BRCA1-211ENST00000472490 IRF2BP1Q8IU81 584 aa15.12■□□□□ 0.01
BRCA1-211ENST00000472490 TTC9BQ8N6N2 239 aa15.12■□□□□ 0.01
BRCA1-211ENST00000472490 ANKRD20A12PQ8NF67 263 aa15.12■□□□□ 0.01
BRCA1-211ENST00000472490 NXPE3Q969Y0 559 aa15.12■□□□□ 0.01
BRCA1-211ENST00000472490 ELMO3Q96BJ8 720 aa15.12■□□□□ 0.01
BRCA1-211ENST00000472490 FAM81BQ96LP2 452 aa15.12■□□□□ 0.01
BRCA1-211ENST00000472490 GCNAQ96QF7 691 aa15.12■□□□□ 0.01
BRCA1-211ENST00000472490 GPR88Q9GZN0 384 aa15.12■□□□□ 0.01
BRCA1-211ENST00000472490 DPEP3Q9H4B8 488 aa15.12■□□□□ 0.01
BRCA1-211ENST00000472490 GDE1Q9NZC3 331 aa15.12■□□□□ 0.01
BRCA1-211ENST00000472490 EPS15L1Q9UBC2 864 aa15.12■□□□□ 0.01
BRCA1-211ENST00000472490 UXTQ9UBK9 157 aaPredicted RBP15.12■□□□□ 0.01
BRCA1-211ENST00000472490 GTPBP10A4D1E9 387 aaKnown RBP15.11■□□□□ 0.01
BRCA1-211ENST00000472490 KCNJ18B7U540 433 aa15.11■□□□□ 0.01
BRCA1-211ENST00000472490 SOAT2O75908 522 aa15.11■□□□□ 0.01
BRCA1-211ENST00000472490 MYL4P12829 197 aa15.11■□□□□ 0.01
BRCA1-211ENST00000472490 LAMP2P13473 410 aa15.11■□□□□ 0.01
BRCA1-211ENST00000472490 ALADP13716 330 aa15.11■□□□□ 0.01
BRCA1-211ENST00000472490 ATF6P18850 670 aa15.11■□□□□ 0.01
BRCA1-211ENST00000472490 BDNFP23560 247 aa15.11■□□□□ 0.01
BRCA1-211ENST00000472490 NTHL1P78549 312 aa15.11■□□□□ 0.01
BRCA1-211ENST00000472490 MYL5Q02045 173 aa15.11■□□□□ 0.01
BRCA1-211ENST00000472490 KCNJ12Q14500 433 aa15.11■□□□□ 0.01
BRCA1-211ENST00000472490 ACOT1Q86TX2 421 aa15.11■□□□□ 0.01
BRCA1-211ENST00000472490 RNF135Q8IUD6 432 aa15.11■□□□□ 0.01
BRCA1-211ENST00000472490 SCN4BQ8IWT1 228 aa15.11■□□□□ 0.01
BRCA1-211ENST00000472490 PPM1KQ8N3J5 372 aa15.11■□□□□ 0.01
BRCA1-211ENST00000472490 EHBP1Q8NDI1 1231 aa15.11■□□□□ 0.01
BRCA1-211ENST00000472490 FEZF2Q8TBJ5 459 aa15.11■□□□□ 0.01
BRCA1-211ENST00000472490 FGF13Q92913 245 aa15.11■□□□□ 0.01
BRCA1-211ENST00000472490 SPATA17Q96L03 361 aa15.11■□□□□ 0.01
BRCA1-211ENST00000472490 TUBGCP2Q9BSJ2 902 aa15.11■□□□□ 0.01
BRCA1-211ENST00000472490 MED10Q9BTT4 135 aa15.11■□□□□ 0.01
BRCA1-211ENST00000472490 DNAJC25Q9H1X3 360 aa15.11■□□□□ 0.01
BRCA1-211ENST00000472490 CISHQ9NSE2 258 aa15.11■□□□□ 0.01
BRCA1-211ENST00000472490 IGSF9Q9P2J2 1179 aa15.11■□□□□ 0.01
BRCA1-211ENST00000472490 NME7Q9Y5B8 376 aa15.11■□□□□ 0.01
BRCA1-211ENST00000472490 TSC2P49815 1807 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 LRRN2O75325 713 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 CDC25CP30307 473 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 CDR1P51861 262 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 GCNT1Q02742 428 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 DDR2Q16832 855 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 VWA3BQ502W6 1294 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 ARHGAP15Q53QZ3 475 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 TCP11X2Q5H9J9 407 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 PRSS36Q5K4E3 855 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 GBP6Q6ZN66 633 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 MTSS1LQ765P7 747 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 ENOSF1Q7L5Y1 443 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 ITFG1Q8TB96 612 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 GIPC2Q8TF65 315 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 TATDN2Q93075 761 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 JAKMIP2Q96AA8 810 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 SMARCD1Q96GM5 515 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 TMEM176AQ96HP8 235 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 C8orf48Q96LL4 319 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 LPIN3Q9BQK8 851 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 NDST4Q9H3R1 872 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 CD320Q9NPF0 282 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 SAMSN1Q9NSI8 373 aaKnown RBP15.1■□□□□ 0.01
BRCA1-211ENST00000472490 GCNT4Q9P109 453 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 LIMD1Q9UGP4 676 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 ZMYM5Q9UJ78 669 aa15.1■□□□□ 0.01
BRCA1-211ENST00000472490 PES1O00541 588 aaKnown RBP15.09■□□□□ 0.01
BRCA1-211ENST00000472490 LRMPQ12912 555 aa15.09■□□□□ 0.01
BRCA1-211ENST00000472490 EXOC3L4Q17RC7 722 aa15.09■□□□□ 0.01
BRCA1-211ENST00000472490 ZNF394Q53GI3 561 aa15.09■□□□□ 0.01
BRCA1-211ENST00000472490 C11orf57Q6ZUT1 292 aaPredicted RBP15.09■□□□□ 0.01
BRCA1-211ENST00000472490 NPAS3Q8IXF0 933 aa15.09■□□□□ 0.01
BRCA1-211ENST00000472490 HS6ST3Q8IZP7 471 aa15.09■□□□□ 0.01
BRCA1-211ENST00000472490 LMO3Q8TAP4 145 aa15.09■□□□□ 0.01
BRCA1-211ENST00000472490 CYFIP2Q96F07 1278 aa15.09■□□□□ 0.01
BRCA1-211ENST00000472490 TRMT2BQ96GJ1 504 aaKnown RBP15.09■□□□□ 0.01
BRCA1-211ENST00000472490 HEXIM2Q96MH2 286 aaKnown RBP15.09■□□□□ 0.01
BRCA1-211ENST00000472490 MYADMQ96S97 322 aa15.09■□□□□ 0.01
BRCA1-211ENST00000472490 BPIFA3Q9BQP9 254 aa15.09■□□□□ 0.01
BRCA1-211ENST00000472490 B3GNT5Q9BYG0 378 aa15.09■□□□□ 0.01
BRCA1-211ENST00000472490 INTS2Q9H0H0 1204 aaKnown RBP15.09■□□□□ 0.01
BRCA1-211ENST00000472490 ATXN3LQ9H3M9 355 aa15.09■□□□□ 0.01
BRCA1-211ENST00000472490 DMAP1Q9NPF5 467 aaPredicted RBP15.09■□□□□ 0.01
BRCA1-211ENST00000472490 KIAA1257Q9ULG3 409 aa15.09■□□□□ 0.01
BRCA1-211ENST00000472490 MAGED2Q9UNF1 606 aaPredicted RBP15.09■□□□□ 0.01
BRCA1-211ENST00000472490 SMTNL1A8MU46 457 aa15.08■□□□□ 0
BRCA1-211ENST00000472490 DCXO43602 365 aa15.08■□□□□ 0
BRCA1-211ENST00000472490 NOL4O94818 638 aa15.08■□□□□ 0
BRCA1-211ENST00000472490 GABRR2P28476 465 aa15.08■□□□□ 0
BRCA1-211ENST00000472490 SLC8A3P57103 927 aa15.08■□□□□ 0
BRCA1-211ENST00000472490 MTMR3Q13615 1198 aa15.08■□□□□ 0
BRCA1-211ENST00000472490 CCDC142Q17RM4 750 aa15.08■□□□□ 0
BRCA1-211ENST00000472490 SLC5A9Q2M3M2 681 aa15.08■□□□□ 0
BRCA1-211ENST00000472490 ANO6Q4KMQ2 910 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms