RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 ZNF667Q5HYK9 610 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 C1orf220Q5T0J3 134 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 SV2AQ7L0J3 742 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 SUMF1Q8NBK3 374 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 OR6B3Q8NGW1 331 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 FAM200AQ8TCP9 573 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 KBTBD7Q8WVZ9 684 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 MYADMQ96S97 322 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 SYT15Q9BQS2 421 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 MRPL45Q9BRJ2 306 aaKnown RBP12.7□□□□□ -0.38
CLRN1-205ENST00000472224 MKNK1Q9BUB5 465 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 RHOBTB2Q9BYZ6 727 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 TMLHEQ9NVH6 421 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 DNMT3BQ9UBC3 853 aaKnown RBP12.7□□□□□ -0.38
CLRN1-205ENST00000472224 PATJQ8NI35 1801 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 BICDL2A1A5D9 508 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 PPP1R3GB7ZBB8 358 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 NARSO43776 548 aaKnown RBP12.69□□□□□ -0.38
CLRN1-205ENST00000472224 N4BP1O75113 896 aaKnown RBP12.69□□□□□ -0.38
CLRN1-205ENST00000472224 RHOP08100 348 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 SP9P0CG40 484 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 ATICP31939 592 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 ALDH1A3P47895 512 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 MXI1P50539 228 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 EPHB3P54753 998 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 CLDN10P78369 228 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 PPP3CAQ08209 521 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 PLD1Q13393 1074 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 INTS6LQ5JSJ4 861 aaKnown RBP12.69□□□□□ -0.38
CLRN1-205ENST00000472224 IQCEQ6IPM2 695 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 SPOPLQ6IQ16 392 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 RTL10Q7L3V2 364 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 LRRTM3Q86VH5 581 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 TRIML1Q8N9V2 468 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 ST13P5Q8NFI4 369 aaPredicted RBP12.69□□□□□ -0.38
CLRN1-205ENST00000472224 ITFG1Q8TB96 612 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 ZNF512Q96ME7 567 aaPredicted RBP12.69□□□□□ -0.38
CLRN1-205ENST00000472224 LPIN3Q9BQK8 851 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 PI4K2AQ9BTU6 479 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 IMPG2Q9BZV3 1241 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 XYLT2Q9H1B5 865 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 TMEM8AQ9HCN3 771 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 FBXL21Q9UKT6 434 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 MAFFQ9ULX9 164 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 PCDHB5Q9Y5E4 795 aa12.69□□□□□ -0.38
CLRN1-205ENST00000472224 IKBKBO14920 756 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 STX10O60499 249 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 PAPLNO95428 1278 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 POU2F2P09086 479 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 MYL4P12829 197 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 P4HA1P13674 534 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 PTPN2P17706 415 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 WARSP23381 471 aaKnown RBP12.68□□□□□ -0.38
CLRN1-205ENST00000472224 ATXN1P54253 815 aaKnown RBP12.68□□□□□ -0.38
CLRN1-205ENST00000472224 VEPH1Q14D04 833 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 NFE2Q16621 373 aaPredicted RBP12.68□□□□□ -0.38
CLRN1-205ENST00000472224 SLC5A9Q2M3M2 681 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 TTI2Q6NXR4 508 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 PDZD4Q76G19 769 aaPredicted RBP12.68□□□□□ -0.38
CLRN1-205ENST00000472224 DPH6Q7L8W6 267 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 SPATA2LQ8IUW3 424 aaPredicted RBP12.68□□□□□ -0.38
CLRN1-205ENST00000472224 ZC3H3Q8IXZ2 948 aaKnown RBP12.68□□□□□ -0.38
CLRN1-205ENST00000472224 CCDC150Q8NCX0 1101 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 SPATA18Q8TC71 538 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 SPPL2BQ8TCT7 592 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 TAS1R2Q8TE23 839 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 CEP63Q96MT8 703 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 DUSP9Q99956 384 aaKnown RBP12.68□□□□□ -0.38
CLRN1-205ENST00000472224 ACBD6Q9BR61 282 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 KCNK12Q9HB15 430 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 ASAH2Q9NR71 780 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 DLGAP2Q9P1A6 1054 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 CEP72Q9P209 647 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 ARMCX3Q9UH62 379 aaPredicted RBP12.68□□□□□ -0.38
CLRN1-205ENST00000472224 GTF3C4Q9UKN8 822 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 CDH9Q9ULB4 789 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 MRPS23Q9Y3D9 190 aaKnown RBP12.68□□□□□ -0.38
CLRN1-205ENST00000472224 DENND4CQ5VZ89 1909 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 OBSL1O75147 1896 aa12.68□□□□□ -0.38
CLRN1-205ENST00000472224 A8MXQ7 604 aa12.67□□□□□ -0.38
CLRN1-205ENST00000472224 GABRDO14764 452 aa12.67□□□□□ -0.38
CLRN1-205ENST00000472224 ATP2C2O75185 946 aa12.67□□□□□ -0.38
CLRN1-205ENST00000472224 STAU1O95793 577 aaKnown RBP12.67□□□□□ -0.38
CLRN1-205ENST00000472224 HAPLN1P10915 354 aaPredicted RBP12.67□□□□□ -0.38
CLRN1-205ENST00000472224 CEBPBP17676 345 aa12.67□□□□□ -0.38
CLRN1-205ENST00000472224 LMO2P25791 158 aa12.67□□□□□ -0.38
CLRN1-205ENST00000472224 GNL1P36915 607 aaPredicted RBP12.67□□□□□ -0.38
CLRN1-205ENST00000472224 GPR15P49685 360 aa12.67□□□□□ -0.38
CLRN1-205ENST00000472224 CDH8P55286 799 aa12.67□□□□□ -0.38
CLRN1-205ENST00000472224 NOP14P78316 857 aaKnown RBP12.67□□□□□ -0.38
CLRN1-205ENST00000472224 CYP27A1Q02318 531 aa12.67□□□□□ -0.38
CLRN1-205ENST00000472224 SMARCB1Q12824 385 aa12.67□□□□□ -0.38
CLRN1-205ENST00000472224 TAF12Q16514 161 aa12.67□□□□□ -0.38
CLRN1-205ENST00000472224 MDH1BQ5I0G3 518 aa12.67□□□□□ -0.38
CLRN1-205ENST00000472224 CYP4A22Q5TCH4 519 aa12.67□□□□□ -0.38
CLRN1-205ENST00000472224 SDHAF4Q5VUM1 108 aa12.67□□□□□ -0.38
CLRN1-205ENST00000472224 KRT39Q6A163 491 aa12.67□□□□□ -0.38
CLRN1-205ENST00000472224 CREBRFQ8IUR6 639 aa12.67□□□□□ -0.38
CLRN1-205ENST00000472224 SCN4BQ8IWT1 228 aa12.67□□□□□ -0.38
CLRN1-205ENST00000472224 STKLD1Q8NE28 680 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms