RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 SYCP1Q15431 976 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 ARHGAP44Q17R89 818 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 MGAT5BQ3V5L5 792 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 CES5AQ6NT32 575 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 TMEM270Q6UE05 265 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 CYP26C1Q6V0L0 522 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 PAQR9Q6ZVX9 377 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 GPR149Q86SP6 731 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 C12orf29Q8N999 325 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 SMRP1Q8NCR6 262 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.11□□□□□ -0.31
PRKCB-205ENST00000472066 FEZF2Q8TBJ5 459 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 HEXIM2Q96MH2 286 aaKnown RBP13.11□□□□□ -0.31
PRKCB-205ENST00000472066 ERGIC2Q96RQ1 377 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 SEPT5Q99719 369 aaPredicted RBP13.11□□□□□ -0.31
PRKCB-205ENST00000472066 RHOBTB2Q9BYZ6 727 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 PLCB1Q9NQ66 1216 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 AJAP1Q9UKB5 411 aaPredicted RBP13.11□□□□□ -0.31
PRKCB-205ENST00000472066 CNTN6Q9UQ52 1028 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 YIPF1Q9Y548 306 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 PCDHB4Q9Y5E5 795 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 TSC2P49815 1807 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 PRUNE2Q8WUY3 3088 aa13.1□□□□□ -0.31
PRKCB-205ENST00000472066 GRXCR2A6NFK2 248 aa13.1□□□□□ -0.31
PRKCB-205ENST00000472066 CLDN5O00501 218 aa13.1□□□□□ -0.31
PRKCB-205ENST00000472066 NOL4O94818 638 aa13.1□□□□□ -0.31
PRKCB-205ENST00000472066 LRG1P02750 347 aa13.1□□□□□ -0.31
PRKCB-205ENST00000472066 POU2F2P09086 479 aa13.1□□□□□ -0.31
PRKCB-205ENST00000472066 UCHL3P15374 230 aa13.1□□□□□ -0.31
PRKCB-205ENST00000472066 BDNFP23560 247 aa13.1□□□□□ -0.31
PRKCB-205ENST00000472066 MAGEA11P43364 429 aa13.1□□□□□ -0.31
PRKCB-205ENST00000472066 UBASH3AP57075 661 aa13.1□□□□□ -0.31
PRKCB-205ENST00000472066 IQCEQ6IPM2 695 aa13.1□□□□□ -0.31
PRKCB-205ENST00000472066 GAS2L3Q86XJ1 694 aa13.1□□□□□ -0.31
PRKCB-205ENST00000472066 FUKQ8N0W3 1084 aa13.1□□□□□ -0.31
PRKCB-205ENST00000472066 CYFIP2Q96F07 1278 aa13.1□□□□□ -0.31
PRKCB-205ENST00000472066 PCMTD1Q96MG8 357 aaPredicted RBP13.1□□□□□ -0.31
PRKCB-205ENST00000472066 HNRNPABQ99729 332 aaKnown RBP13.1□□□□□ -0.31
PRKCB-205ENST00000472066 MED10Q9BTT4 135 aa13.1□□□□□ -0.31
PRKCB-205ENST00000472066 NAA15Q9BXJ9 866 aaKnown RBP13.1□□□□□ -0.31
PRKCB-205ENST00000472066 RBSNQ9H1K0 784 aa13.1□□□□□ -0.31
PRKCB-205ENST00000472066 THEGQ9P2T0 379 aa13.1□□□□□ -0.31
PRKCB-205ENST00000472066 KIAA1257Q9ULG3 409 aa13.1□□□□□ -0.31
PRKCB-205ENST00000472066 MBTPS2O43462 519 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 XYLBO75191 536 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 PAEPP09466 180 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 KRT5P13647 590 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 CCDC130P13994 396 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 ATF6P18850 670 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 RFX1P22670 979 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 GPR15P49685 360 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 ZNF132P52740 706 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 EPHB3P54753 998 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 RPL10AP62906 217 aaKnown RBP13.09□□□□□ -0.31
PRKCB-205ENST00000472066 PLD1Q13393 1074 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 SMAD4Q13485 552 aaKnown RBP13.09□□□□□ -0.31
PRKCB-205ENST00000472066 DDR2Q16832 855 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 AAK1Q2M2I8 961 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 PUS10Q3MIT2 529 aaKnown RBP13.09□□□□□ -0.31
PRKCB-205ENST00000472066 ATAT1Q5SQI0 421 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 SMYD5Q6GMV2 418 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 VSTM1Q6UX27 236 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 RBBP8NLQ8NC74 664 aaPredicted RBP13.09□□□□□ -0.31
PRKCB-205ENST00000472066 SLC2A14Q8TDB8 520 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 ATXN2LQ8WWM7 1075 aaKnown RBP13.09□□□□□ -0.31
PRKCB-205ENST00000472066 SHC3Q92529 594 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 SUSD6Q92537 303 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 SMG7Q92540 1137 aaKnown RBP13.09□□□□□ -0.31
PRKCB-205ENST00000472066 ZNF512Q96ME7 567 aaPredicted RBP13.09□□□□□ -0.31
PRKCB-205ENST00000472066 ZNF518BQ9C0D4 1074 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 GANQ9H2C0 597 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 PIDD1Q9HB75 910 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 FAM207AQ9NSI2 230 aaPredicted RBP13.09□□□□□ -0.31
PRKCB-205ENST00000472066 FAM49BQ9NUQ9 324 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 CEP72Q9P209 647 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 CDH22Q9UJ99 828 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 USP15Q9Y4E8 981 aaPredicted RBP13.09□□□□□ -0.31
PRKCB-205ENST00000472066 FHOD1Q9Y613 1164 aa13.09□□□□□ -0.31
PRKCB-205ENST00000472066 SPTBN5Q9NRC6 3674 aaKnown RBP13.09□□□□□ -0.31
PRKCB-205ENST00000472066 A0A1W2PQC6 194 aa13.08□□□□□ -0.32
PRKCB-205ENST00000472066 FOXN3O00409 490 aaPredicted RBP13.08□□□□□ -0.32
PRKCB-205ENST00000472066 EPHB6O15197 1021 aa13.08□□□□□ -0.32
PRKCB-205ENST00000472066 VDRP11473 427 aa13.08□□□□□ -0.32
PRKCB-205ENST00000472066 PTPN2P17706 415 aa13.08□□□□□ -0.32
PRKCB-205ENST00000472066 GRIK1P39086 918 aa13.08□□□□□ -0.32
PRKCB-205ENST00000472066 MTHFRP42898 656 aa13.08□□□□□ -0.32
PRKCB-205ENST00000472066 CACNA2D1P54289 1103 aa13.08□□□□□ -0.32
PRKCB-205ENST00000472066 POLR2FP61218 127 aaKnown RBP13.08□□□□□ -0.32
PRKCB-205ENST00000472066 MRPS5P82675 430 aaKnown RBP13.08□□□□□ -0.32
PRKCB-205ENST00000472066 RAPGEF1Q13905 1077 aa13.08□□□□□ -0.32
PRKCB-205ENST00000472066 DRAP1Q14919 205 aaPredicted RBP13.08□□□□□ -0.32
PRKCB-205ENST00000472066 PTPN21Q16825 1174 aa13.08□□□□□ -0.32
PRKCB-205ENST00000472066 PPP1R26Q5T8A7 1209 aaPredicted RBP13.08□□□□□ -0.32
PRKCB-205ENST00000472066 PTCRAQ6ISU1 281 aaPredicted RBP13.08□□□□□ -0.32
PRKCB-205ENST00000472066 GRASPQ7Z6J2 395 aaPredicted RBP13.08□□□□□ -0.32
PRKCB-205ENST00000472066 FAM35AQ86V20 835 aa13.08□□□□□ -0.32
PRKCB-205ENST00000472066 SCN4BQ8IWT1 228 aa13.08□□□□□ -0.32
PRKCB-205ENST00000472066 ELMOD1Q8N336 334 aa13.08□□□□□ -0.32
PRKCB-205ENST00000472066 NEK11Q8NG66 645 aa13.08□□□□□ -0.32
PRKCB-205ENST00000472066 GPR152Q8TDT2 470 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms