RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 FAM163BP0C2L3 166 aa12.34□□□□□ -0.43
COL4A3-205ENST00000471862 PRR29P0C7W0 189 aa12.34□□□□□ -0.43
COL4A3-205ENST00000471862 SP9P0CG40 484 aa12.34□□□□□ -0.43
COL4A3-205ENST00000471862 LMO2P25791 158 aa12.34□□□□□ -0.43
COL4A3-205ENST00000471862 MAGEA11P43364 429 aa12.34□□□□□ -0.43
COL4A3-205ENST00000471862 SYKP43405 635 aa12.34□□□□□ -0.43
COL4A3-205ENST00000471862 NLRP12P59046 1061 aa12.34□□□□□ -0.43
COL4A3-205ENST00000471862 RPL10AP62906 217 aaKnown RBP12.34□□□□□ -0.43
COL4A3-205ENST00000471862 CLDN10P78369 228 aa12.34□□□□□ -0.43
COL4A3-205ENST00000471862 DDR2Q16832 855 aa12.34□□□□□ -0.43
COL4A3-205ENST00000471862 SDHAF4Q5VUM1 108 aa12.34□□□□□ -0.43
COL4A3-205ENST00000471862 GPIHBP1Q8IV16 184 aa12.34□□□□□ -0.43
COL4A3-205ENST00000471862 PARD3BQ8TEW8 1205 aa12.34□□□□□ -0.43
COL4A3-205ENST00000471862 CCDC127Q96BQ5 260 aa12.34□□□□□ -0.43
COL4A3-205ENST00000471862 TRMT2BQ96GJ1 504 aaKnown RBP12.34□□□□□ -0.43
COL4A3-205ENST00000471862 MYRFLQ96LU7 910 aa12.34□□□□□ -0.43
COL4A3-205ENST00000471862 GCNAQ96QF7 691 aa12.34□□□□□ -0.43
COL4A3-205ENST00000471862 SYT15Q9BQS2 421 aa12.34□□□□□ -0.43
COL4A3-205ENST00000471862 XYLT2Q9H1B5 865 aa12.34□□□□□ -0.43
COL4A3-205ENST00000471862 GOLPH3LQ9H4A5 285 aa12.34□□□□□ -0.43
COL4A3-205ENST00000471862 VRTNQ9H8Y1 702 aa12.34□□□□□ -0.43
COL4A3-205ENST00000471862 CRTAC1Q9NQ79 661 aa12.34□□□□□ -0.43
COL4A3-205ENST00000471862 ZMYM5Q9UJ78 669 aa12.34□□□□□ -0.43
COL4A3-205ENST00000471862 MRPS17Q9Y2R5 130 aaKnown RBP12.34□□□□□ -0.43
COL4A3-205ENST00000471862 R3HCC1Q9Y3T6 440 aaKnown RBP12.34□□□□□ -0.43
COL4A3-205ENST00000471862 PIAS3Q9Y6X2 628 aa12.34□□□□□ -0.43
COL4A3-205ENST00000471862 CFAP54Q96N23 3096 aa12.33□□□□□ -0.44
COL4A3-205ENST00000471862 SLC38A8A6NNN8 435 aa12.33□□□□□ -0.44
COL4A3-205ENST00000471862 LRRIQ3A6PVS8 624 aaPredicted RBP12.33□□□□□ -0.44
COL4A3-205ENST00000471862 SOBPA7XYQ1 873 aa12.33□□□□□ -0.44
COL4A3-205ENST00000471862 PDXKO00764 312 aa12.33□□□□□ -0.44
COL4A3-205ENST00000471862 NCAM2O15394 837 aa12.33□□□□□ -0.44
COL4A3-205ENST00000471862 RHOBTB3O94955 611 aa12.33□□□□□ -0.44
COL4A3-205ENST00000471862 RPN1P04843 607 aaKnown RBP12.33□□□□□ -0.44
COL4A3-205ENST00000471862 DDX6P26196 483 aaKnown RBP eCLIP12.33□□□□□ -0.44
COL4A3-205ENST00000471862 ATICP31939 592 aa12.33□□□□□ -0.44
COL4A3-205ENST00000471862 CASP4P49662 377 aa12.33□□□□□ -0.44
COL4A3-205ENST00000471862 PSMC1P62191 440 aaKnown RBP12.33□□□□□ -0.44
COL4A3-205ENST00000471862 DPYDQ12882 1025 aa12.33□□□□□ -0.44
COL4A3-205ENST00000471862 TAF12Q16514 161 aa12.33□□□□□ -0.44
COL4A3-205ENST00000471862 ARHGAP29Q52LW3 1261 aa12.33□□□□□ -0.44
COL4A3-205ENST00000471862 SPATA2LQ8IUW3 424 aaPredicted RBP12.33□□□□□ -0.44
COL4A3-205ENST00000471862 YAF2Q8IY57 180 aa12.33□□□□□ -0.44
COL4A3-205ENST00000471862 CMTM8Q8IZV2 173 aa12.33□□□□□ -0.44
COL4A3-205ENST00000471862 RIN3Q8TB24 985 aa12.33□□□□□ -0.44
COL4A3-205ENST00000471862 BPIFB1Q8TDL5 484 aa12.33□□□□□ -0.44
COL4A3-205ENST00000471862 FAM3CQ92520 227 aa12.33□□□□□ -0.44
COL4A3-205ENST00000471862 NKD2Q969F2 451 aaPredicted RBP12.33□□□□□ -0.44
COL4A3-205ENST00000471862 MYLPFQ96A32 169 aa12.33□□□□□ -0.44
COL4A3-205ENST00000471862 MSANTD3Q96H12 275 aa12.33□□□□□ -0.44
COL4A3-205ENST00000471862 MRPL45Q9BRJ2 306 aaKnown RBP12.33□□□□□ -0.44
COL4A3-205ENST00000471862 SCAND2PQ9GZW5 306 aaPredicted RBP12.33□□□□□ -0.44
COL4A3-205ENST00000471862 CHRDQ9H2X0 955 aa12.33□□□□□ -0.44
COL4A3-205ENST00000471862 FBXO4Q9UKT5 387 aa12.33□□□□□ -0.44
COL4A3-205ENST00000471862 TRAF3IP3Q9Y228 551 aa12.33□□□□□ -0.44
COL4A3-205ENST00000471862 ATP6V1DQ9Y5K8 247 aa12.33□□□□□ -0.44
COL4A3-205ENST00000471862 HELZP42694 1942 aaKnown RBP12.33□□□□□ -0.44
COL4A3-205ENST00000471862 DPYSL4O14531 572 aa12.32□□□□□ -0.44
COL4A3-205ENST00000471862 LAMTOR5O43504 91 aa12.32□□□□□ -0.44
COL4A3-205ENST00000471862 VNN1O95497 513 aa12.32□□□□□ -0.44
COL4A3-205ENST00000471862 C4BPAP04003 597 aaKnown RBP12.32□□□□□ -0.44
COL4A3-205ENST00000471862 CHRNB1P11230 501 aa12.32□□□□□ -0.44
COL4A3-205ENST00000471862 MYL6P60660 151 aa12.32□□□□□ -0.44
COL4A3-205ENST00000471862 MAPRE1Q15691 268 aaKnown RBP12.32□□□□□ -0.44
COL4A3-205ENST00000471862 ZNF528Q3MIS6 628 aa12.32□□□□□ -0.44
COL4A3-205ENST00000471862 WDR72Q3MJ13 1102 aa12.32□□□□□ -0.44
COL4A3-205ENST00000471862 WDR44Q5JSH3 913 aa12.32□□□□□ -0.44
COL4A3-205ENST00000471862 TDRD10Q5VZ19 366 aaKnown RBP12.32□□□□□ -0.44
COL4A3-205ENST00000471862 VSTM1Q6UX27 236 aa12.32□□□□□ -0.44
COL4A3-205ENST00000471862 KRBA2Q6ZNG9 492 aa12.32□□□□□ -0.44
COL4A3-205ENST00000471862 C4orf50Q6ZRC1 276 aa12.32□□□□□ -0.44
COL4A3-205ENST00000471862 MON1AQ86VX9 555 aa12.32□□□□□ -0.44
COL4A3-205ENST00000471862 CELF5Q8N6W0 485 aaKnown RBP12.32□□□□□ -0.44
COL4A3-205ENST00000471862 FSIP1Q8NA03 581 aa12.32□□□□□ -0.44
COL4A3-205ENST00000471862 NELL1Q92832 810 aa12.32□□□□□ -0.44
COL4A3-205ENST00000471862 PCED1BQ96HM7 432 aa12.32□□□□□ -0.44
COL4A3-205ENST00000471862 ZFYVE19Q96K21 471 aa12.32□□□□□ -0.44
COL4A3-205ENST00000471862 SPATA17Q96L03 361 aa12.32□□□□□ -0.44
COL4A3-205ENST00000471862 CEP295NLQ96MC4 621 aa12.32□□□□□ -0.44
COL4A3-205ENST00000471862 MMS19Q96T76 1030 aa12.32□□□□□ -0.44
COL4A3-205ENST00000471862 SMG9Q9H0W8 520 aaKnown RBP12.32□□□□□ -0.44
COL4A3-205ENST00000471862 SEMA4AQ9H3S1 761 aa12.32□□□□□ -0.44
COL4A3-205ENST00000471862 C8orf33Q9H7E9 229 aaPredicted RBP12.32□□□□□ -0.44
COL4A3-205ENST00000471862 PRMT8Q9NR22 394 aaPredicted RBP12.32□□□□□ -0.44
COL4A3-205ENST00000471862 SPATA6Q9NWH7 488 aaPredicted RBP12.32□□□□□ -0.44
COL4A3-205ENST00000471862 MAGEC2Q9UBF1 373 aaPredicted RBP12.32□□□□□ -0.44
COL4A3-205ENST00000471862 UXTQ9UBK9 157 aaPredicted RBP12.32□□□□□ -0.44
COL4A3-205ENST00000471862 NDRG2Q9UN36 371 aaKnown RBP12.32□□□□□ -0.44
COL4A3-205ENST00000471862 MAGED2Q9UNF1 606 aaPredicted RBP12.32□□□□□ -0.44
COL4A3-205ENST00000471862 R4GN57 208 aa12.32□□□□□ -0.44
COL4A3-205ENST00000471862 GVINP1Q7Z2Y8 2422 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 OTOGLQ3ZCN5 2332 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 NR3C1P04150 777 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 PDGFRBP09619 1106 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 CCNE1P24864 410 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 CTHP32929 405 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 SOX9P48436 509 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 AP3M2P53677 418 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 PLCB2Q00722 1185 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 TRPC3Q13507 836 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms