RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 EDEM3Q9BZQ6 932 aa14.93□□□□□ -0.02
SSR4-207ENST00000471724 UBE2ZQ9H832 354 aaPredicted RBP14.93□□□□□ -0.02
SSR4-207ENST00000471724 CYP4F11Q9HBI6 524 aa14.93□□□□□ -0.02
SSR4-207ENST00000471724 NLRC4Q9NPP4 1024 aa14.93□□□□□ -0.02
SSR4-207ENST00000471724 ZDHHC7Q9NXF8 308 aa14.93□□□□□ -0.02
SSR4-207ENST00000471724 MYO6Q9UM54 1294 aa14.93□□□□□ -0.02
SSR4-207ENST00000471724 INSL5Q9Y5Q6 135 aa14.93□□□□□ -0.02
SSR4-207ENST00000471724 BRWD1Q9NSI6 2320 aa14.93□□□□□ -0.02
SSR4-207ENST00000471724 DENND4AQ7Z401 1863 aa14.93□□□□□ -0.02
SSR4-207ENST00000471724 EPHB6O15197 1021 aa14.92□□□□□ -0.02
SSR4-207ENST00000471724 GLP2RO95838 553 aa14.92□□□□□ -0.02
SSR4-207ENST00000471724 HNRNPA1P09651 372 aaKnown RBP eCLIP14.92□□□□□ -0.02
SSR4-207ENST00000471724 CD19P15391 556 aa14.92□□□□□ -0.02
SSR4-207ENST00000471724 HOXB8P17481 243 aaPredicted RBP14.92□□□□□ -0.02
SSR4-207ENST00000471724 GTF2F1P35269 517 aaKnown RBP eCLIP14.92□□□□□ -0.02
SSR4-207ENST00000471724 USP8P40818 1118 aa14.92□□□□□ -0.02
SSR4-207ENST00000471724 MAGEA11P43364 429 aa14.92□□□□□ -0.02
SSR4-207ENST00000471724 TUFMP49411 452 aaKnown RBP14.92□□□□□ -0.02
SSR4-207ENST00000471724 BPIFB4P59827 614 aa14.92□□□□□ -0.02
SSR4-207ENST00000471724 ORC1Q13415 861 aa14.92□□□□□ -0.02
SSR4-207ENST00000471724 ADAM15Q13444 863 aa14.92□□□□□ -0.02
SSR4-207ENST00000471724 CTC1Q2NKJ3 1217 aa14.92□□□□□ -0.02
SSR4-207ENST00000471724 SGO2Q562F6 1265 aa14.92□□□□□ -0.02
SSR4-207ENST00000471724 PPM1LQ5SGD2 360 aa14.92□□□□□ -0.02
SSR4-207ENST00000471724 SPECC1LQ69YQ0 1117 aa14.92□□□□□ -0.02
SSR4-207ENST00000471724 VSTM1Q6UX27 236 aa14.92□□□□□ -0.02
SSR4-207ENST00000471724 FAM35AQ86V20 835 aa14.92□□□□□ -0.02
SSR4-207ENST00000471724 LRRTM3Q86VH5 581 aa14.92□□□□□ -0.02
SSR4-207ENST00000471724 SLC7A14Q8TBB6 771 aa14.92□□□□□ -0.02
SSR4-207ENST00000471724 SMARCD1Q96GM5 515 aa14.92□□□□□ -0.02
SSR4-207ENST00000471724 HEXIM2Q96MH2 286 aaKnown RBP14.92□□□□□ -0.02
SSR4-207ENST00000471724 MED10Q9BTT4 135 aa14.92□□□□□ -0.02
SSR4-207ENST00000471724 FAM49BQ9NUQ9 324 aa14.92□□□□□ -0.02
SSR4-207ENST00000471724 TMLHEQ9NVH6 421 aa14.92□□□□□ -0.02
SSR4-207ENST00000471724 CLDND1Q9NY35 253 aa14.92□□□□□ -0.02
SSR4-207ENST00000471724 AJAP1Q9UKB5 411 aaPredicted RBP14.92□□□□□ -0.02
SSR4-207ENST00000471724 YIPF1Q9Y548 306 aa14.92□□□□□ -0.02
SSR4-207ENST00000471724 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.92□□□□□ -0.02
SSR4-207ENST00000471724 ZNF638Q14966 1978 aaKnown RBP14.91□□□□□ -0.02
SSR4-207ENST00000471724 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.91□□□□□ -0.02
SSR4-207ENST00000471724 A0A1W2PQJ5 194 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 DLL1O00548 723 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 TRIM66O15016 1216 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 MED7O43513 233 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 ZMYND10O75800 440 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 LRG1P02750 347 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 POU2F2P09086 479 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 TPM1P09493 284 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 VDRP11473 427 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 CCDC130P13994 396 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 GNA15P30679 374 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 STAT1P42224 750 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 JAM2P57087 298 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 RPL10AP62906 217 aaKnown RBP14.91□□□□□ -0.02
SSR4-207ENST00000471724 PTK2Q05397 1052 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 DUSP4Q13115 394 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 VEPH1Q14D04 833 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 MEA1Q16626 185 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 CCDC142Q17RM4 750 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 PUS10Q3MIT2 529 aaKnown RBP14.91□□□□□ -0.02
SSR4-207ENST00000471724 MGAT5BQ3V5L5 792 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 ARHGAP17Q68EM7 881 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 FAM71AQ8IYT1 594 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 ATAD1Q8NBU5 361 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 VN1R2Q8NFZ6 395 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 SLC2A14Q8TDB8 520 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 CYFIP2Q96F07 1278 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 MRFAP1L1Q96HT8 127 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 CEP295NLQ96MC4 621 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 SEPT5Q99719 369 aaPredicted RBP14.91□□□□□ -0.02
SSR4-207ENST00000471724 HNRNPABQ99729 332 aaKnown RBP14.91□□□□□ -0.02
SSR4-207ENST00000471724 TTYH3Q9C0H2 523 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 GPR88Q9GZN0 384 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 NUCKS1Q9H1E3 243 aaKnown RBP14.91□□□□□ -0.02
SSR4-207ENST00000471724 DMAP1Q9NPF5 467 aaPredicted RBP14.91□□□□□ -0.02
SSR4-207ENST00000471724 KRT82Q9NSB4 513 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 OBSL1O75147 1896 aa14.91□□□□□ -0.02
SSR4-207ENST00000471724 LINC01565O15544 149 aa14.9□□□□□ -0.02
SSR4-207ENST00000471724 XYLBO75191 536 aa14.9□□□□□ -0.02
SSR4-207ENST00000471724 TBX10O75333 385 aa14.9□□□□□ -0.02
SSR4-207ENST00000471724 SEC24AO95486 1093 aa14.9□□□□□ -0.02
SSR4-207ENST00000471724 VNN2O95498 520 aa14.9□□□□□ -0.02
SSR4-207ENST00000471724 CCDC172P0C7W6 258 aa14.9□□□□□ -0.02
SSR4-207ENST00000471724 SPATA31D3P0C874 917 aa14.9□□□□□ -0.02
SSR4-207ENST00000471724 FAM200BP0CF97 657 aa14.9□□□□□ -0.02
SSR4-207ENST00000471724 HAPLN1P10915 354 aaPredicted RBP14.9□□□□□ -0.02
SSR4-207ENST00000471724 ANXA13P27216 316 aa14.9□□□□□ -0.02
SSR4-207ENST00000471724 SOX5P35711 763 aa14.9□□□□□ -0.02
SSR4-207ENST00000471724 ALDH1A3P47895 512 aa14.9□□□□□ -0.02
SSR4-207ENST00000471724 PDE6CP51160 858 aa14.9□□□□□ -0.02
SSR4-207ENST00000471724 SLC8A3P57103 927 aa14.9□□□□□ -0.02
SSR4-207ENST00000471724 TFF2Q03403 129 aa14.9□□□□□ -0.02
SSR4-207ENST00000471724 ANKRD54Q6NXT1 300 aa14.9□□□□□ -0.02
SSR4-207ENST00000471724 CYP26C1Q6V0L0 522 aa14.9□□□□□ -0.02
SSR4-207ENST00000471724 EP400NLQ6ZTU2 488 aa14.9□□□□□ -0.02
SSR4-207ENST00000471724 SPATA31D4Q6ZUB0 917 aa14.9□□□□□ -0.02
SSR4-207ENST00000471724 VSTM4Q8IW00 320 aa14.9□□□□□ -0.02
SSR4-207ENST00000471724 FUKQ8N0W3 1084 aa14.9□□□□□ -0.02
SSR4-207ENST00000471724 ELMOD1Q8N336 334 aa14.9□□□□□ -0.02
SSR4-207ENST00000471724 TTC9BQ8N6N2 239 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms