RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 COL15A1P39059 1388 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 E9PBE3 544 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 ZW10O43264 779 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 RESTQ13127 1097 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 STX3Q13277 289 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 MMGT1Q8N4V1 131 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 OSCP1Q8WVF1 389 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 C9orf72Q96LT7 481 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 ARID1BQ8NFD5 2236 aaPredicted RBP13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 GNG14A0A1W2PPG7 69 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 RTN2O75298 545 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 DSG3P32926 999 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 SV2CQ496J9 727 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 ATF7IP2Q5U623 682 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 CCDC60Q8IWA6 550 aaPredicted RBP13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 HPDLQ96IR7 371 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 NARFQ9UHQ1 456 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 CNTN1Q12860 1018 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 TRADDQ15628 312 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 FBXO38Q6PIJ6 1188 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 DNAJC1Q96KC8 554 aaKnown RBP13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 CNDP1Q96KN2 507 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 KRCC1Q9NPI7 259 aaPredicted RBP13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 ABCB1P08183 1280 aaPredicted RBP13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 MAPKAPK2P49137 400 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 DYNC1I2Q13409 638 aaKnown RBP13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 KYAT1Q16773 422 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 GOLPH3LQ9H4A5 285 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 TRMT6Q9UJA5 497 aaKnown RBP13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 RNF112Q9ULX5 631 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 TDRKHQ9Y2W6 561 aaKnown RBP13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 ZBTB22O15209 634 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 TSPAN9O75954 239 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 AKAP5P24588 427 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 CPT1AP50416 773 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 CNGA2Q16280 664 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 C18orf25Q96B23 403 aaPredicted RBP13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 CHST12Q9NRB3 414 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 SLC38A7Q9NVC3 462 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 ATP6V1HQ9UI12 483 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 SPAG17Q6Q759 2223 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 HSMCR30P0CW71 290 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 SLC35G2Q8TBE7 412 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 ARHGEF26Q96DR7 871 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 PLA2G4CQ9UP65 541 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 ZNF500O60304 480 aaPredicted RBP13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 ITGB3P05106 788 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 GRK3P35626 688 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 ZNF200P98182 395 aaPredicted RBP13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 FAXCQ5TGI0 409 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 ENOSF1Q7L5Y1 443 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 SAMD7Q7Z3H4 446 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 ATL2Q8NHH9 583 aa13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 METTL5Q9NRN9 209 aaKnown RBP13.75□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 IQCMA0A1B0GVH7 501 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 STX7O15400 261 aaKnown RBP13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 TSPAN3O60637 253 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 PQBP1O60828 265 aaKnown RBP13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 ITGB6P18564 788 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 C4BPBP20851 252 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 NOS3P29474 1203 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 PTPN9P43378 593 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 CYP51A1Q16850 503 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 UCMAQ8WVF2 138 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 CNGB3Q9NQW8 809 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 DDIT4Q9NX09 232 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 MYL4P12829 197 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 CSNK2BP67870 215 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 SNRNP35Q16560 246 aaKnown RBP13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 ZC2HC1CQ53FD0 456 aaPredicted RBP13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 TLK2Q86UE8 772 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 ENGASEQ8NFI3 743 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 TMEM39BQ9GZU3 492 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 SPRTNQ9H040 489 aaPredicted RBP13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 LY9Q9HBG7 655 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 HERC5Q9UII4 1024 aaKnown RBP13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 SNX6Q9UNH7 406 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 PER1O15534 1290 aaPredicted RBP13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 CLEC4GQ6UXB4 293 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 POLR1DQ9Y2S0 133 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 M0R3G1 203 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 SREBF2Q12772 1141 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 TMC7Q7Z402 723 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 GPRC5AQ8NFJ5 357 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 FBXO32Q969P5 355 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 PRPF18Q99633 342 aaKnown RBP13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 WWP1Q9H0M0 922 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 PTPRHQ9HD43 1115 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 TTC26A0AVF1 554 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 CYP2C19P33261 490 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 KCNK10P57789 538 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 NOTUMQ6P988 496 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 MACC1Q6ZN28 852 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 CNBD2Q96M20 576 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 SH3GL2Q99962 352 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 CHUKO15111 745 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 PNMA6AP0CW24 399 aaPredicted RBP13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 PRKCEQ02156 737 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 CCDC103Q8IW40 242 aa13.74□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 IQCF2Q8IXL9 164 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms