RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 NECAB1Q8N987 351 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 GLIS3Q8NEA6 775 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 CEP76Q8TAP6 659 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 PIP4K2CQ8TBX8 421 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 SH3RF2Q8TEC5 729 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 SNX29Q8TEQ0 813 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 MTMR9Q96QG7 549 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 SLC22A12Q96S37 553 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 RPF1Q9H9Y2 349 aaKnown RBP7.43□□□□□ -1.22
HDAC1-204ENST00000471488 ZSWIM6Q9HCJ5 1215 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 PTPRHQ9HD43 1115 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 LRWD1Q9UFC0 647 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 MMP17Q9ULZ9 603 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 TBX20Q9UMR3 447 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 APOBEC2Q9Y235 224 aaKnown RBP7.43□□□□□ -1.22
HDAC1-204ENST00000471488 PCDHB5Q9Y5E4 795 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 LAMA5O15230 3695 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 LOC400499M0QZD8 3231 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 CITO14578 2027 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 ASCC3Q8N3C0 2202 aaKnown RBP7.42□□□□□ -1.22
HDAC1-204ENST00000471488 MYMKA6NI61 221 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 K7EQS6 105 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 SGK1O00141 431 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 ARHGAP33O14559 1287 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 NDUFS2O75306 463 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 REC8O95072 547 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 F11P03951 625 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 SYPP08247 313 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 CSH1P0DML2 217 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 CSH2P0DML3 217 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 HAPLN1P10915 354 aaPredicted RBP7.42□□□□□ -1.22
HDAC1-204ENST00000471488 HNRNPLP14866 589 aaKnown RBP eCLIP7.42□□□□□ -1.22
HDAC1-204ENST00000471488 TYMPP19971 482 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 LRPAP1P30533 357 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 SLC6A11P48066 632 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 LIG4P49917 911 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 SMTNP53814 917 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 EVCP57679 992 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 LILRA4P59901 499 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 TSPY1Q01534 308 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 FAM160A1Q05DH4 1040 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 ZNF33AQ06730 810 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 CYP4F3Q08477 520 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 IFRD2Q12894 506 aaPredicted RBP7.42□□□□□ -1.22
HDAC1-204ENST00000471488 SAFBQ15424 915 aaKnown RBP eCLIP7.42□□□□□ -1.22
HDAC1-204ENST00000471488 ECM1Q16610 540 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 EML3Q32P44 896 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 WSCD1Q658N2 575 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 JADE1Q6IE81 842 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 TMEM150AQ86TG1 271 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 MON1AQ86VX9 555 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 RASSF3Q86WH2 238 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 DCP1BQ8IZD4 617 aaKnown RBP7.42□□□□□ -1.22
HDAC1-204ENST00000471488 SPPL2BQ8TCT7 592 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 KCNB2Q92953 911 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 HSPA12BQ96MM6 686 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 PLIN2Q99541 437 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 RUSC1Q9BVN2 902 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 ZCWPW1Q9H0M4 648 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 MIR1-1HGQ9H1L0 117 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 TMEM134Q9H6X4 195 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 PRDM16Q9HAZ2 1276 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 SMPD4Q9NXE4 827 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 ZMYM5Q9UJ78 669 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 PILRBQ9UKJ0 227 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 CYP8B1Q9UNU6 501 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 DNM3Q9UQ16 869 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 RBM19Q9Y4C8 960 aaKnown RBP7.42□□□□□ -1.22
HDAC1-204ENST00000471488 STK36Q9NRP7 1315 aa7.42□□□□□ -1.22
HDAC1-204ENST00000471488 FREM2Q5SZK8 3169 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 FAM149AA5PLN7 773 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 C2orf78A6NCI8 922 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 TBC1D3BA6NDS4 549 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 HNRNPDLO14979 420 aaKnown RBP7.41□□□□□ -1.22
HDAC1-204ENST00000471488 APODP05090 189 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 NFICP08651 508 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 SERPINF2P08697 491 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 CD59P13987 128 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 HDCP19113 662 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 PROZP22891 400 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 ACAT1P24752 427 aaKnown RBP7.41□□□□□ -1.22
HDAC1-204ENST00000471488 CYP2F1P24903 491 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 MAOBP27338 520 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 DPP6P42658 865 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 RESTQ13127 1097 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 HNRNPDQ14103 355 aaKnown RBP7.41□□□□□ -1.22
HDAC1-204ENST00000471488 TMEM132DQ14C87 1099 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 ZNF77Q15935 545 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 EOGTQ5NDL2 527 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 C9orf57Q5W0N0 161 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 CCNI2Q6ZMN8 369 aaPredicted RBP7.41□□□□□ -1.22
HDAC1-204ENST00000471488 FILIP1Q7Z7B0 1213 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 ZNF605Q86T29 641 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 LRRTM3Q86VH5 581 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 NAT16Q8N8M0 369 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 TRIML1Q8N9V2 468 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 FSIP1Q8NA03 581 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 SPATA18Q8TC71 538 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 NOC3LQ8WTT2 800 aaKnown RBP7.41□□□□□ -1.22
HDAC1-204ENST00000471488 SLC39A7Q92504 469 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms