RNA–Protein interactions for RNA: ENST00000471470.1

CDC45-208, Transcript of cell division cycle 45, human

TSL 5

Gene CDC45, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC45-208	ENST00000471470	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.45	□□□□□ -0.26
CDC45-208	ENST00000471470	FUK	Q8N0W3	1084 aa		13.45	□□□□□ -0.26
CDC45-208	ENST00000471470	SLC2A14	Q8TDB8	520 aa		13.45	□□□□□ -0.26
CDC45-208	ENST00000471470	DDX1	Q92499	740 aa	Known RBP	13.45	□□□□□ -0.26
CDC45-208	ENST00000471470	PPP2R3C	Q969Q6	453 aa		13.45	□□□□□ -0.26
CDC45-208	ENST00000471470	MYLPF	Q96A32	169 aa		13.45	□□□□□ -0.26
CDC45-208	ENST00000471470	CDCA3	Q99618	268 aa	Predicted RBP	13.45	□□□□□ -0.26
CDC45-208	ENST00000471470	ZSWIM1	Q9BR11	485 aa		13.45	□□□□□ -0.26
CDC45-208	ENST00000471470	B3GNT5	Q9BYG0	378 aa		13.45	□□□□□ -0.26
CDC45-208	ENST00000471470	ACP6	Q9NPH0	428 aa		13.45	□□□□□ -0.26
CDC45-208	ENST00000471470	FAM49B	Q9NUQ9	324 aa		13.45	□□□□□ -0.26
CDC45-208	ENST00000471470	TMLHE	Q9NVH6	421 aa		13.45	□□□□□ -0.26
CDC45-208	ENST00000471470	PCDHGC3	Q9UN70	934 aa		13.45	□□□□□ -0.26
CDC45-208	ENST00000471470	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.45	□□□□□ -0.26
CDC45-208	ENST00000471470	MTMR11	A4FU01	709 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	RFXAP	O00287	272 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	CCDC130	P13994	396 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	ATF2	P15336	505 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	POU3F3	P20264	500 aa	Predicted RBP	13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	FECH	P22830	423 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	KLRC2	P26717	231 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	CYP27A1	Q02318	531 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	CCDC173	Q0VFZ6	552 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	CCDC142	Q17RM4	750 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	HABP4	Q5JVS0	413 aa	Known RBP	13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	LILRA6	Q6PI73	481 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	WDR59	Q6PJI9	974 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	VSTM1	Q6UX27	236 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	RNF19B	Q6ZMZ0	732 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	PAQR9	Q6ZVX9	377 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	FAM35A	Q86V20	835 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	ANKRD52	Q8NB46	1076 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	SMARCD1	Q96GM5	515 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	LRCH3	Q96II8	777 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	AGPAT1	Q99943	283 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	LPIN3	Q9BQK8	851 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	SYT11	Q9BT88	431 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	MED10	Q9BTT4	135 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	PRDM12	Q9H4Q4	367 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	HAUS4	Q9H6D7	363 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	HESX1	Q9UBX0	185 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	TSPAN16	Q9UKR8	245 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	PCDHGC5	Q9Y5F6	944 aa		13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	LAMA2	P24043	3122 aa	Known RBP	13.44	□□□□□ -0.26
CDC45-208	ENST00000471470	TRANK1	O15050	2925 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	CHD7	Q9P2D1	2997 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	SSU72P8	A0A1W2PR75	194 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	CLASP2	O75122	1294 aa	Known RBP	13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	VNN2	O95498	520 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	LSM8	O95777	96 aa	Known RBP	13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	GLUD1	P00367	558 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	CALCA	P01258	141 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	FAM200B	P0CF97	657 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	SETSIP	P0DME0	302 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	ADORA2B	P29275	332 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	TUFM	P49411	452 aa	Known RBP	13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	CLCN4	P51793	760 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	BCAT1	P54687	386 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	SLC8A3	P57103	927 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	GOLGA8F	Q08AF8	430 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	GOLGA8DP	Q0D2H9	430 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	GRIN2C	Q14957	1233 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	GOLGA7B	Q2TAP0	167 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	PKDCC	Q504Y2	493 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	TDRD12	Q587J7	1177 aa	Known RBP	13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	TRIM72	Q6ZMU5	477 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	RTL10	Q7L3V2	364 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	CCDC186	Q7Z3E2	898 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	VPS36	Q86VN1	386 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	GLYCTK	Q8IVS8	523 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	TCEAL8	Q8IYN2	117 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	HDAC7	Q8WUI4	952 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	SLC20A1	Q8WUM9	679 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	CEP295NL	Q96MC4	621 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	PPP1R9B	Q96SB3	815 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	DUSP16	Q9BY84	665 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	ZNF518B	Q9C0D4	1074 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	LHX5	Q9H2C1	402 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	NSUN3	Q9H649	340 aa	Known RBP	13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	CSNK1G1	Q9HCP0	422 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	ABI2	Q9NYB9	513 aa	Predicted RBP	13.43	□□□□□ -0.26
CDC45-208	ENST00000471470	DPP7	Q9UHL4	492 aa		13.43	□□□□□ -0.26
CDC45-208	ENST00000471470		M0QYV0	167 aa		13.42	□□□□□ -0.26
CDC45-208	ENST00000471470	CLDN5	O00501	218 aa		13.42	□□□□□ -0.26
CDC45-208	ENST00000471470	TGM5	O43548	720 aa		13.42	□□□□□ -0.26
CDC45-208	ENST00000471470	AP1G2	O75843	785 aa		13.42	□□□□□ -0.26
CDC45-208	ENST00000471470	MICAL2	O94851	1124 aa		13.42	□□□□□ -0.26
CDC45-208	ENST00000471470	CSPG5	O95196	566 aa		13.42	□□□□□ -0.26
CDC45-208	ENST00000471470	MME	P08473	750 aa		13.42	□□□□□ -0.26
CDC45-208	ENST00000471470	HAPLN1	P10915	354 aa	Predicted RBP	13.42	□□□□□ -0.26
CDC45-208	ENST00000471470	SKIL	P12757	684 aa		13.42	□□□□□ -0.26
CDC45-208	ENST00000471470	NPR3	P17342	541 aa		13.42	□□□□□ -0.26
CDC45-208	ENST00000471470	CHRNB2	P17787	502 aa		13.42	□□□□□ -0.26
CDC45-208	ENST00000471470	ELF1	P32519	619 aa		13.42	□□□□□ -0.26
CDC45-208	ENST00000471470	CDH5	P33151	784 aa	Predicted RBP	13.42	□□□□□ -0.26
CDC45-208	ENST00000471470	FMO1	Q01740	532 aa		13.42	□□□□□ -0.26
CDC45-208	ENST00000471470	ADCY1	Q08828	1119 aa		13.42	□□□□□ -0.26
CDC45-208	ENST00000471470	BST2	Q10589	180 aa	Known RBP	13.42	□□□□□ -0.26
CDC45-208	ENST00000471470	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.42	□□□□□ -0.26
CDC45-208	ENST00000471470	DUSP6	Q16828	381 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms