RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 M0QYV0 167 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 GRM6O15303 877 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 ADAM12O43184 909 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 LSM8O95777 96 aaKnown RBP12.32□□□□□ -0.44
FN1-217ENST00000471193 CYP1A1P04798 512 aaPredicted RBP12.32□□□□□ -0.44
FN1-217ENST00000471193 CPB1P15086 417 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 RPL17P18621 184 aaKnown RBP12.32□□□□□ -0.44
FN1-217ENST00000471193 ADORA2BP29275 332 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 SSTR3P32745 418 aaPredicted RBP12.32□□□□□ -0.44
FN1-217ENST00000471193 CDH5P33151 784 aaPredicted RBP12.32□□□□□ -0.44
FN1-217ENST00000471193 CYLC1P35663 651 aaPredicted RBP12.32□□□□□ -0.44
FN1-217ENST00000471193 ERVFC1P60507 584 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 NOMO3P69849 1222 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 ROR1Q01973 937 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 GPM6BQ13491 265 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 MTF1Q14872 753 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 SLC18A3Q16572 532 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 PKDCCQ504Y2 493 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 DENND1BQ6P3S1 775 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 C4orf50Q6ZRC1 276 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 PAQR9Q6ZVX9 377 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 TTC30AQ86WT1 665 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 PASD1Q8IV76 773 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 PCDHB18PQ96TA0 734 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 CLSTN3Q9BQT9 956 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 B3GNT5Q9BYG0 378 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 ZNF518BQ9C0D4 1074 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 ENTPD7Q9NQZ7 604 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 ADAMTS1Q9UHI8 967 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 IRAK3Q9Y616 596 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 ATP8B3O60423 1300 aa12.32□□□□□ -0.44
FN1-217ENST00000471193 A0A087X0T9 212 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.31□□□□□ -0.44
FN1-217ENST00000471193 WDR27A2RRH5 827 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 MTMR11A4FU01 709 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 EIF3CLB5ME19 914 aaKnown RBP12.31□□□□□ -0.44
FN1-217ENST00000471193 CLDN5O00501 218 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 AKR1B10O60218 316 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 NDUFA10O95299 355 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 LCA5LO95447 670 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 VNN2O95498 520 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 FAM228BP0C875 321 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 UNGP13051 313 aaPredicted RBP12.31□□□□□ -0.44
FN1-217ENST00000471193 TNFAIP3P21580 790 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 NDUFV1P49821 464 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 BCAT1P54687 386 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 CYP27A1Q02318 531 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 CENPCQ03188 943 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 GFPT1Q06210 699 aaPredicted RBP12.31□□□□□ -0.44
FN1-217ENST00000471193 BST2Q10589 180 aaKnown RBP12.31□□□□□ -0.44
FN1-217ENST00000471193 SMARCB1Q12824 385 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 GPR17Q13304 367 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 CAMK1Q14012 370 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 SMC1AQ14683 1233 aaKnown RBP12.31□□□□□ -0.44
FN1-217ENST00000471193 NFE2Q16621 373 aaPredicted RBP12.31□□□□□ -0.44
FN1-217ENST00000471193 CLEC16AQ2KHT3 1053 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 CFAP221Q4G0U5 840 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 PRPF38BQ5VTL8 546 aaKnown RBP12.31□□□□□ -0.44
FN1-217ENST00000471193 PLPP4Q5VZY2 271 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 TMC7Q7Z402 723 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 SPATA2LQ8IUW3 424 aaPredicted RBP12.31□□□□□ -0.44
FN1-217ENST00000471193 ANKRD52Q8NB46 1076 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 ARNTL2Q8WYA1 636 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 SMARCD1Q96GM5 515 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 FUBP3Q96I24 572 aaKnown RBP eCLIP12.31□□□□□ -0.44
FN1-217ENST00000471193 ZNF830Q96NB3 372 aaPredicted RBP12.31□□□□□ -0.44
FN1-217ENST00000471193 EIF3CQ99613 913 aaKnown RBP12.31□□□□□ -0.44
FN1-217ENST00000471193 MED10Q9BTT4 135 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.31□□□□□ -0.44
FN1-217ENST00000471193 LMAN2LQ9H0V9 348 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 LHX5Q9H2C1 402 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 PDCL3Q9H2J4 239 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 CERS4Q9HA82 394 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 ABCB6Q9NP58 842 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 NGRNQ9NPE2 291 aaKnown RBP12.31□□□□□ -0.44
FN1-217ENST00000471193 KRT82Q9NSB4 513 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 SPTLC3Q9NUV7 552 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 SEPT11Q9NVA2 429 aaKnown RBP12.31□□□□□ -0.44
FN1-217ENST00000471193 HESX1Q9UBX0 185 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 COLQQ9Y215 455 aaPredicted RBP12.31□□□□□ -0.44
FN1-217ENST00000471193 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.31□□□□□ -0.44
FN1-217ENST00000471193 CHD9Q3L8U1 2897 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 PTPRDP23468 1912 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 LAMA3Q16787 3333 aa12.31□□□□□ -0.44
FN1-217ENST00000471193 C2orf71A6NGG8 1288 aa12.3□□□□□ -0.44
FN1-217ENST00000471193 EPOPA6NHQ4 379 aa12.3□□□□□ -0.44
FN1-217ENST00000471193 ZNF263O14978 683 aa12.3□□□□□ -0.44
FN1-217ENST00000471193 TEX28O15482 410 aa12.3□□□□□ -0.44
FN1-217ENST00000471193 CNPP09543 421 aaKnown RBP12.3□□□□□ -0.44
FN1-217ENST00000471193 FAM200BP0CF97 657 aa12.3□□□□□ -0.44
FN1-217ENST00000471193 SETSIPP0DME0 302 aa12.3□□□□□ -0.44
FN1-217ENST00000471193 GZMAP12544 262 aa12.3□□□□□ -0.44
FN1-217ENST00000471193 NPR3P17342 541 aa12.3□□□□□ -0.44
FN1-217ENST00000471193 OR1D2P34982 312 aa12.3□□□□□ -0.44
FN1-217ENST00000471193 IRS1P35568 1242 aa12.3□□□□□ -0.44
FN1-217ENST00000471193 DEKP35659 375 aaKnown RBP12.3□□□□□ -0.44
FN1-217ENST00000471193 GPD2P43304 727 aa12.3□□□□□ -0.44
FN1-217ENST00000471193 ARPP19P56211 112 aa12.3□□□□□ -0.44
FN1-217ENST00000471193 RAB33AQ14088 237 aa12.3□□□□□ -0.44
FN1-217ENST00000471193 HS1BP3Q53T59 392 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms