RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 MRFAP1Q9Y605 127 aa8.9□□□□□ -0.98
FDPS-209ENST00000471117 CAPN6Q9Y6Q1 641 aa8.9□□□□□ -0.98
FDPS-209ENST00000471117 TTC3P53804 2025 aa8.9□□□□□ -0.99
FDPS-209ENST00000471117 NCANO14594 1321 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 SCN1AP35498 2009 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 A0A0A6YYK5 440 aaPredicted RBP8.89□□□□□ -0.99
FDPS-209ENST00000471117 ANO9A1A5B4 782 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 C9IYK1 514 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 ENC1O14682 589 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 CTIFO43310 598 aaKnown RBP8.89□□□□□ -0.99
FDPS-209ENST00000471117 EOMESO95936 686 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 FTLP02792 175 aaPredicted RBP8.89□□□□□ -0.99
FDPS-209ENST00000471117 ATP1A1P05023 1023 aaKnown RBP8.89□□□□□ -0.99
FDPS-209ENST00000471117 MMEP08473 750 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 KRT19P08727 400 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 TMEM253P0C7T8 217 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 GZMAP12544 262 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 KCNE1P15382 129 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 IBSPP21815 317 aaPredicted RBP8.89□□□□□ -0.99
FDPS-209ENST00000471117 NOP2P46087 812 aaKnown RBP8.89□□□□□ -0.99
FDPS-209ENST00000471117 GUCY2FP51841 1108 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 ADAM15Q13444 863 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 GPNMBQ14956 572 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 IFI16Q16666 785 aaKnown RBP8.89□□□□□ -0.99
FDPS-209ENST00000471117 XKR4Q5GH76 650 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 PAPD7Q5XG87 772 aaKnown RBP8.89□□□□□ -0.99
FDPS-209ENST00000471117 TMEM270Q6UE05 265 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 TMEM130Q8N3G9 435 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 UBR7Q8N806 425 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 RBBP8NLQ8NC74 664 aaPredicted RBP8.89□□□□□ -0.99
FDPS-209ENST00000471117 KREMEN2Q8NCW0 462 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 LRRN4CLQ8ND94 238 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 MNS1Q8NEH6 495 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 FLCNQ8NFG4 579 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 CXorf38Q8TB03 319 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 DDX1Q92499 740 aaKnown RBP8.89□□□□□ -0.99
FDPS-209ENST00000471117 TSC1Q92574 1164 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 TAF4BQ92750 862 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 LPPQ93052 612 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 MSLNLQ96KJ4 702 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 PHF7Q9BWX1 381 aaPredicted RBP8.89□□□□□ -0.99
FDPS-209ENST00000471117 XYLT2Q9H1B5 865 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 ISCUQ9H1K1 167 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 RNF39Q9H2S5 420 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 SEMA4AQ9H3S1 761 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 DPP3Q9NY33 737 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 ITGA11Q9UKX5 1188 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 CDV3Q9UKY7 258 aaKnown RBP8.89□□□□□ -0.99
FDPS-209ENST00000471117 UBQLN1Q9UMX0 589 aaKnown RBP8.89□□□□□ -0.99
FDPS-209ENST00000471117 POLIQ9UNA4 740 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 CNTN6Q9UQ52 1028 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 JRKLQ9Y4A0 524 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 INSL6Q9Y581 213 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.89□□□□□ -0.99
FDPS-209ENST00000471117 CACNA1IQ9P0X4 2223 aa8.89□□□□□ -0.99
FDPS-209ENST00000471117 SMIM28A0A1B0GU29 152 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 FAM170AA1A519 330 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 GRID2IPA4D2P6 1211 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 ANKRD62A6NC57 917 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 DYNC1I1O14576 645 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 ENPP3O14638 875 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 PI15O43692 258 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 RTN2O75298 545 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 PALMO75781 387 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 ITGB3P05106 788 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 WEE2P0C1S8 567 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 CYP3A5P20815 502 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 ABCB4P21439 1286 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 KCNA4P22459 653 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 MLH1P40692 756 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 YWHAEP62258 255 aaKnown RBP8.88□□□□□ -0.99
FDPS-209ENST00000471117 FAM189BP81408 668 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 RBP5P82980 135 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 ZBTB6Q15916 424 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 WHAMMP3Q1A5X7 153 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 CLEC16AQ2KHT3 1053 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 ZNF667Q5HYK9 610 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 GLRA4Q5JXX5 417 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 CNKSR3Q6P9H4 555 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 SCARA5Q6ZMJ2 495 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.88□□□□□ -0.99
FDPS-209ENST00000471117 AGMOQ6ZNB7 445 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 ZNF598Q86UK7 904 aaKnown RBP8.88□□□□□ -0.99
FDPS-209ENST00000471117 RTN4RL1Q86UN2 441 aaPredicted RBP8.88□□□□□ -0.99
FDPS-209ENST00000471117 ZNF677Q86XU0 584 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 TPCN2Q8NHX9 752 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 LINC01599Q8WXQ3 324 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 CTNNBL1Q8WYA6 563 aaPredicted RBP8.88□□□□□ -0.99
FDPS-209ENST00000471117 ARHGEF26Q96DR7 871 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 ZMAT2Q96NC0 199 aaKnown RBP8.88□□□□□ -0.99
FDPS-209ENST00000471117 GAD1Q99259 594 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 CXCL16Q9H2A7 254 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 ELAC1Q9H777 363 aaKnown RBP8.88□□□□□ -0.99
FDPS-209ENST00000471117 RSAD1Q9HA92 442 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 CISHQ9NSE2 258 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 SLC38A7Q9NVC3 462 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 CLEC1BQ9P126 229 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 NXF1Q9UBU9 619 aaKnown RBP8.88□□□□□ -0.99
FDPS-209ENST00000471117 AGAP1Q9UPQ3 857 aa8.88□□□□□ -0.99
FDPS-209ENST00000471117 SAR1BQ9Y6B6 198 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms