RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 CPSF3Q9UKF6 684 aaKnown RBP9.77□□□□□ -0.85
SF3A1-206ENST00000471037 DSEQ9UL01 958 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 TBX20Q9UMR3 447 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 SLC27A5Q9Y2P5 690 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 DERAQ9Y315 318 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 A0A0B4J269 797 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 NPHP3-ACAD11A0A0J9YXS1 232 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 ANO9A1A5B4 782 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 GDF9O60383 454 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 SOAT2O75908 522 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 ABCD1P33897 745 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 PPP1R2P41236 205 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 LIMK1P53667 647 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 CYP4F8P98187 520 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 TNK2Q07912 1038 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 EHHADHQ08426 723 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 SMARCB1Q12824 385 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 VEPH1Q14D04 833 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 ITPRIPL2Q3MIP1 535 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 CT47A1Q5JQC4 288 aaPredicted RBP9.76□□□□□ -0.85
SF3A1-206ENST00000471037 FAM26FQ5R3K3 315 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 HEATR6Q6AI08 1181 aaKnown RBP9.76□□□□□ -0.85
SF3A1-206ENST00000471037 JADE1Q6IE81 842 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 SLC39A4Q6P5W5 647 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 C2orf15Q8WU43 125 aaKnown RBP9.76□□□□□ -0.85
SF3A1-206ENST00000471037 LOXL4Q96JB6 756 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 SEPT5Q99719 369 aaPredicted RBP9.76□□□□□ -0.85
SF3A1-206ENST00000471037 LPIN3Q9BQK8 851 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 MSTO1Q9BUK6 570 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 ZCWPW1Q9H0M4 648 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 TSPY26PQ9H489 355 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 ZHX3Q9H4I2 956 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 ASB7Q9H672 318 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 OLFML3Q9NRN5 406 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 THG1LQ9NWX6 298 aaKnown RBP9.76□□□□□ -0.85
SF3A1-206ENST00000471037 C2CD2Q9Y426 696 aa9.76□□□□□ -0.85
SF3A1-206ENST00000471037 ZFHX4Q86UP3 3567 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 SOBPA7XYQ1 873 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 K7ENM7 598 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 AKAP3O75969 853 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 NFICP08651 508 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 GTF2BQ00403 316 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 POU5F1Q01860 360 aaKnown RBP9.75□□□□□ -0.85
SF3A1-206ENST00000471037 STIM1Q13586 685 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 ALCAMQ13740 583 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 TMEM132DQ14C87 1099 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 DPCR1Q3MIW9 517 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 SLC39A12Q504Y0 691 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 COBLL1Q53SF7 1204 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 TMEM196Q5HYL7 178 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 CEP68Q76N32 757 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 SFR1Q86XK3 245 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 GPIHBP1Q8IV16 184 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 CMTM8Q8IZV2 173 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 MYCT1Q8N699 235 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 TTC8Q8TAM2 541 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 SPPL2BQ8TCT7 592 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 GAB3Q8WWW8 586 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 CHFRQ96EP1 664 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 GCNAQ96QF7 691 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 FIZ1Q96SL8 496 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 FAM83CQ9BQN1 747 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 SLC46A2Q9BY10 475 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 NAT10Q9H0A0 1025 aaKnown RBP9.75□□□□□ -0.85
SF3A1-206ENST00000471037 KIF9Q9HAQ2 790 aa9.75□□□□□ -0.85
SF3A1-206ENST00000471037 TRDMT1O14717 391 aaKnown RBP9.74□□□□□ -0.85
SF3A1-206ENST00000471037 TM4SF5O14894 197 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 EXTL3O43909 919 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 ATG13O75143 517 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 EPN2O95208 641 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 KIF20AO95235 890 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 ZNF806P0C7X5 589 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 HAPLN1P10915 354 aaPredicted RBP9.74□□□□□ -0.85
SF3A1-206ENST00000471037 BMP6P22004 513 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 DDX6P26196 483 aaKnown RBP eCLIP9.74□□□□□ -0.85
SF3A1-206ENST00000471037 HOXC13P31276 330 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 RAP1GAPP47736 663 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 TAF6P49848 677 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 STK4Q13043 487 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 ST3GAL2Q16842 350 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 MGAT5BQ3V5L5 792 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 ANO6Q4KMQ2 910 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 ISM2Q6H9L7 571 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 FSTL4Q6MZW2 842 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 PKN3Q6P5Z2 889 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 STXBP4Q6ZWJ1 553 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 TMEM150AQ86TG1 271 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 THEM5Q8N1Q8 247 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 KIAA0895Q8NCT3 520 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 FAM212AQ96EL1 285 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 BPIFA3Q9BQP9 254 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 ST6GALNAC4Q9H4F1 302 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 MRPL44Q9H9J2 332 aaKnown RBP9.74□□□□□ -0.85
SF3A1-206ENST00000471037 HPS4Q9NQG7 708 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 PCDHGA5Q9Y5G8 931 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 STYXL1Q9Y6J8 313 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 UBE4BO95155 1302 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 GREB1Q4ZG55 1949 aa9.74□□□□□ -0.85
SF3A1-206ENST00000471037 CYB561D2O14569 222 aa9.73□□□□□ -0.85
SF3A1-206ENST00000471037 PSMA7O14818 248 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms