RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 MTO1Q9Y2Z2 717 aaKnown RBP4.8□□□□□ -1.64
PRPF3-204ENST00000470824 DGKBQ9Y6T7 804 aa4.8□□□□□ -1.64
PRPF3-204ENST00000470824 AATKQ6ZMQ8 1374 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 CCDC180Q9P1Z9 1646 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 LGALS16A8MUM7 142 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 TOR1BO14657 336 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 NPC1O15118 1278 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 TRIM24O15164 1050 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 ZNF185O15231 689 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 PRICKLE3O43900 615 aaPredicted RBP4.79□□□□□ -1.64
PRPF3-204ENST00000470824 HLA-DOAP06340 250 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 PTDSS1P48651 473 aaKnown RBP4.79□□□□□ -1.64
PRPF3-204ENST00000470824 ANXA11P50995 505 aaKnown RBP4.79□□□□□ -1.64
PRPF3-204ENST00000470824 ZNF134P52741 427 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 LOXL3P58215 753 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 LILRA4P59901 499 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 GALNT1Q10472 559 aaPredicted RBP4.79□□□□□ -1.64
PRPF3-204ENST00000470824 CRHR2Q13324 411 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 PTK2BQ14289 1009 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 PDCD4Q53EL6 469 aaKnown RBP4.79□□□□□ -1.64
PRPF3-204ENST00000470824 CACHD1Q5VU97 1274 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 LDHAL6AQ6ZMR3 332 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 GDF7Q7Z4P5 450 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 MAPKAPK5Q8IW41 473 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 CACNA2D3Q8IZS8 1091 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 ZNF483Q8TF39 744 aaPredicted RBP4.79□□□□□ -1.64
PRPF3-204ENST00000470824 TRAPPC12Q8WVT3 735 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 PPP2R3CQ969Q6 453 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 ZSWIM1Q9BR11 485 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 PTDSS2Q9BVG9 487 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 SMOC2Q9H3U7 446 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 TMEM8AQ9HCN3 771 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 TRPM5Q9NZQ8 1165 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 VSX1Q9NZR4 365 aaPredicted RBP4.79□□□□□ -1.64
PRPF3-204ENST00000470824 SORCS3Q9UPU3 1222 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 PCDHGB3Q9Y5G1 929 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.79□□□□□ -1.64
PRPF3-204ENST00000470824 CDY1Q9Y6F8 540 aa4.79□□□□□ -1.64
PRPF3-204ENST00000470824 SPATA31A3Q5VYP0 1347 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 A0A087WZ62 844 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 PRAMEF33A0A0G2JMD5 474 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 KRTAP23-1A1A580 65 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 SYT5O00445 386 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 PIP5K1BO14986 540 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 RGS10O43665 173 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 RRP9O43818 475 aaKnown RBP4.78□□□□□ -1.64
PRPF3-204ENST00000470824 PRAMEF10O60809 474 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 COQ9O75208 318 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 RPS6KA4O75676 772 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 SUN1O94901 812 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 SCAF4O95104 1147 aaKnown RBP4.78□□□□□ -1.64
PRPF3-204ENST00000470824 RASAL1O95294 804 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 HSD3B1P14060 373 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 SERPINF1P36955 418 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 DGKEP52429 567 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 ITGA8P53708 1063 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 PRKAG1P54619 331 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 OCA2Q04671 838 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 FPGSQ05932 587 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 FOXO1Q12778 655 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 MAPKAPK3Q16644 382 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 ZNF750Q32MQ0 723 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 KRTAP19-4Q3LI73 84 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 MZT2AQ6P582 158 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 CRTC1Q6UUV9 634 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 TMEM108Q6UXF1 575 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 LCNL1Q6ZST4 164 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 KIAA0408Q6ZU52 694 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 USP49Q70CQ1 688 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 ZNF280BQ86YH2 543 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 Q8NA96 180 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 FAM71BQ8TC56 605 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 BPIFB1Q8TDL5 484 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 IPO4Q8TEX9 1081 aaKnown RBP4.78□□□□□ -1.64
PRPF3-204ENST00000470824 EDAQ92838 391 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 TBC1D20Q96BZ9 403 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 NELL2Q99435 816 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 SLC46A2Q9BY10 475 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 PCDHAC1Q9H158 963 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 MAGEH1Q9H213 219 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 ZBTB26Q9HCK0 441 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 IGSF9Q9P2J2 1179 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 KCNE5Q9UJ90 142 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 ZMYND8Q9ULU4 1186 aaPredicted RBP4.78□□□□□ -1.64
PRPF3-204ENST00000470824 GTF2A1LQ9UNN4 478 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 CHST2Q9Y4C5 530 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 FPGT-TNNI3KV9GXZ4 949 aa4.78□□□□□ -1.64
PRPF3-204ENST00000470824 A0A1W2PS29 197 aa4.77□□□□□ -1.65
PRPF3-204ENST00000470824 CCDC78A2IDD5 438 aa4.77□□□□□ -1.65
PRPF3-204ENST00000470824 AQP12BA6NM10 295 aa4.77□□□□□ -1.65
PRPF3-204ENST00000470824 F5H697 171 aa4.77□□□□□ -1.65
PRPF3-204ENST00000470824 ACKR2O00590 384 aa4.77□□□□□ -1.65
PRPF3-204ENST00000470824 PIAS2O75928 621 aa4.77□□□□□ -1.65
PRPF3-204ENST00000470824 ITGB3P05106 788 aa4.77□□□□□ -1.65
PRPF3-204ENST00000470824 EGR1P18146 543 aa4.77□□□□□ -1.65
PRPF3-204ENST00000470824 ATICP31939 592 aa4.77□□□□□ -1.65
PRPF3-204ENST00000470824 NDUFV1P49821 464 aa4.77□□□□□ -1.65
PRPF3-204ENST00000470824 RPS7P62081 194 aaKnown RBP4.77□□□□□ -1.65
PRPF3-204ENST00000470824 POU5F1BQ06416 359 aa4.77□□□□□ -1.65
PRPF3-204ENST00000470824 MYO1EQ12965 1108 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms