RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 OGDHQ02218 1023 aa19.15■□□□□ 0.66
SMC4-211ENST00000469858 ZNF268Q14587 947 aaPredicted RBP19.15■□□□□ 0.66
SMC4-211ENST00000469858 PKDCCQ504Y2 493 aa19.15■□□□□ 0.66
SMC4-211ENST00000469858 DSTYKQ6XUX3 929 aa19.15■□□□□ 0.66
SMC4-211ENST00000469858 TNIP3Q96KP6 325 aa19.15■□□□□ 0.66
SMC4-211ENST00000469858 NAP1L3Q99457 506 aaPredicted RBP19.15■□□□□ 0.66
SMC4-211ENST00000469858 CCDC151A5D8V7 595 aa19.14■□□□□ 0.65
SMC4-211ENST00000469858 SIGLEC16A6NMB1 481 aa19.14■□□□□ 0.65
SMC4-211ENST00000469858 E5RJQ4 531 aa19.14■□□□□ 0.65
SMC4-211ENST00000469858 ZMYND10O75800 440 aa19.14■□□□□ 0.65
SMC4-211ENST00000469858 ACAT1P24752 427 aaKnown RBP19.14■□□□□ 0.65
SMC4-211ENST00000469858 RFC1P35251 1148 aaPredicted RBP19.14■□□□□ 0.65
SMC4-211ENST00000469858 TAS2R40P59535 323 aa19.14■□□□□ 0.65
SMC4-211ENST00000469858 BRD3Q15059 726 aa19.14■□□□□ 0.65
SMC4-211ENST00000469858 B3GALNT2Q8NCR0 500 aa19.14■□□□□ 0.65
SMC4-211ENST00000469858 JOSD2Q8TAC2 188 aa19.14■□□□□ 0.65
SMC4-211ENST00000469858 HINFPQ9BQA5 517 aa19.14■□□□□ 0.65
SMC4-211ENST00000469858 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.14■□□□□ 0.655e-47■■■■■ 274.1
SMC4-211ENST00000469858 NBNO60934 754 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 ATP2C2O75185 946 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 TUBBP07437 444 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 GJC1P36383 396 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 PDE4CQ08493 712 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 TUSC3Q13454 348 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 PAN2Q504Q3 1202 aaKnown RBP19.13■□□□□ 0.65
SMC4-211ENST00000469858 PMF1Q6P1K2 205 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 WDR93Q6P2C0 686 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 TMCO3Q6UWJ1 677 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 RHOT1Q8IXI2 618 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 MCRS1Q96EZ8 462 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 DDX47Q9H0S4 455 aaKnown RBP19.13■□□□□ 0.65
SMC4-211ENST00000469858 DMGDHQ9UI17 866 aaKnown RBP19.13■□□□□ 0.65
SMC4-211ENST00000469858 TIMM13Q9Y5L4 95 aaPredicted RBP19.13■□□□□ 0.65
SMC4-211ENST00000469858 SCN5AQ14524 2016 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 CCDC188H7C350 402 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 PSTPIP1O43586 416 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 B3GAT3O94766 335 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 EOMESO95936 686 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 SETSIPP0DME0 302 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 HSPA6P17066 643 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 PIGHQ14442 188 aaPredicted RBP19.13■□□□□ 0.65
SMC4-211ENST00000469858 CLUL1Q15846 466 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 CCDC142Q17RM4 750 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 FAM102AQ5T9C2 384 aaPredicted RBP19.13■□□□□ 0.65
SMC4-211ENST00000469858 GLB1LQ6UWU2 654 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 EMC1Q8N766 993 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 SLC2A14Q8TDB8 520 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 SLC35F5Q8WV83 523 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 FTHL17Q9BXU8 183 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 PLEKHA4Q9H4M7 779 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 DDX43Q9NXZ2 648 aaKnown RBP19.13■□□□□ 0.65
SMC4-211ENST00000469858 LCMT1Q9UIC8 334 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 NR2E1Q9Y466 385 aa19.13■□□□□ 0.65
SMC4-211ENST00000469858 TET1Q8NFU7 2136 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 TSC2P49815 1807 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 F8VP50 259 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 I3L4J1 428 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 GABRDO14764 452 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 SEC31AO94979 1220 aaKnown RBP19.12■□□□□ 0.65
SMC4-211ENST00000469858 PSMA2P25787 234 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 BCAT1P54687 386 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 TIGD5Q53EQ6 642 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 GLE1Q53GS7 698 aaKnown RBP19.12■□□□□ 0.65
SMC4-211ENST00000469858 OR6B2Q6IFH4 312 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 CC2D1AQ6P1N0 951 aaPredicted RBP19.12■□□□□ 0.65
SMC4-211ENST00000469858 FAM183BPQ6ZVS7 135 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 DBF4BQ8NFT6 615 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 HASPINQ8TF76 798 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 DDX27Q96GQ7 796 aaKnown RBP19.12■□□□□ 0.65
SMC4-211ENST00000469858 PLVAPQ9BX97 442 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 MIS12Q9H081 205 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 TANC1Q9C0D5 1861 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 GOLGA6L10A0A0M3HER8 536 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 PITPNM1O00562 1244 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 FAM163BP0C2L3 166 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 MCM3P25205 808 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 BST2Q10589 180 aaKnown RBP19.12■□□□□ 0.65
SMC4-211ENST00000469858 GPNMBQ14956 572 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 LLGL1Q15334 1064 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 CLLU1OSQ5K130 101 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 TMEM86AQ8N2M4 240 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 ANKRD52Q8NB46 1076 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 ARFGAP3Q9NP61 516 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 ZNF446Q9NWS9 450 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 STIM2Q9P246 746 aa19.12■□□□□ 0.65
SMC4-211ENST00000469858 INPPL1O15357 1258 aa19.11■□□□□ 0.65
SMC4-211ENST00000469858 RAD51CO43502 376 aa19.11■□□□□ 0.65
SMC4-211ENST00000469858 TCF4P15884 667 aa19.11■□□□□ 0.65
SMC4-211ENST00000469858 PTPN1P18031 435 aaKnown RBP19.11■□□□□ 0.65
SMC4-211ENST00000469858 TKTP29401 623 aaKnown RBP19.11■□□□□ 0.65
SMC4-211ENST00000469858 AARSP49588 968 aaKnown RBP eCLIP19.11■□□□□ 0.653e-49■■■■■ 252.4
SMC4-211ENST00000469858 CDR1P51861 262 aa19.11■□□□□ 0.65
SMC4-211ENST00000469858 FAM189BP81408 668 aa19.11■□□□□ 0.65
SMC4-211ENST00000469858 NIPA2Q8N8Q9 360 aa19.11■□□□□ 0.65
SMC4-211ENST00000469858 PIWIL1Q96J94 861 aaKnown RBP19.11■□□□□ 0.65
SMC4-211ENST00000469858 SLC4A5Q9BY07 1137 aa19.11■□□□□ 0.65
SMC4-211ENST00000469858 SART1O43290 800 aaKnown RBP19.1■□□□□ 0.65
SMC4-211ENST00000469858 ERLIN1O75477 346 aa19.1■□□□□ 0.65
SMC4-211ENST00000469858 BRCC3P46736 316 aa19.1■□□□□ 0.65
SMC4-211ENST00000469858 LHX1P48742 406 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms