RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 SLC4A11Q8NBS3 891 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 ATAD1Q8NBU5 361 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 SLC7A14Q8TBB6 771 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 ATXN2LQ8WWM7 1075 aaKnown RBP13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 CYFIP2Q96F07 1278 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 SMARCD1Q96GM5 515 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 SPATA17Q96L03 361 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 C8orf48Q96LL4 319 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 ZNF512Q96ME7 567 aaPredicted RBP13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 RIPOR3Q96MK2 946 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 KREMEN1Q96MU8 473 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 NAP1L5Q96NT1 182 aaPredicted RBP13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 ARID3AQ99856 593 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 LSM14BQ9BX40 385 aaKnown RBP13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 NUCKS1Q9H1E3 243 aaKnown RBP13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 AVENQ9NQS1 362 aaPredicted RBP13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 COMMD8Q9NX08 183 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 ABI2Q9NYB9 513 aaPredicted RBP13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 CD207Q9UJ71 328 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 INSL5Q9Y5Q6 135 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 LINC01565O15544 149 aa13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 MICAL2O94851 1124 aa13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 SEC24AO95486 1093 aa13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 SPATA31D3P0C874 917 aa13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 ANXA13P27216 316 aa13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 ZNF132P52740 706 aa13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 PSMC1P62191 440 aaKnown RBP13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 CYP27A1Q02318 531 aa13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 CNGA2Q16280 664 aa13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 MGAT5BQ3V5L5 792 aa13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 SGO2Q562F6 1265 aa13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 SYCE2Q6PIF2 218 aa13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 EP400NLQ6ZTU2 488 aa13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 SPATA31D4Q6ZUB0 917 aa13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 SMRP1Q8NCR6 262 aa13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 RNF214Q8ND24 703 aa13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 PPM1EQ8WY54 764 aa13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 MYLPFQ96A32 169 aa13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 PGLYRP2Q96PD5 576 aa13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 TMEM209Q96SK2 561 aa13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 S1PR5Q9H228 398 aa13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 CSNK1G1Q9HCP0 422 aa13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 PNPLA8Q9NP80 782 aa13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 FAM207AQ9NSI2 230 aaPredicted RBP13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 ZMYM5Q9UJ78 669 aa13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 NME7Q9Y5B8 376 aa13.41□□□□□ -0.26
SPTLC1-204ENST00000469778 SOBPA7XYQ1 873 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 FOXN3O00409 490 aaPredicted RBP13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 ZNF197O14709 1029 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 TBX10O75333 385 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 NOL4O94818 638 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 VNN2O95498 520 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 CSH1P0DML2 217 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 CSH2P0DML3 217 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 KRT5P13647 590 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 PTPN2P17706 415 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 KCNA5P22460 613 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 SMAD4Q13485 552 aaKnown RBP13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 DRAP1Q14919 205 aaPredicted RBP13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 LCLAT1Q6UWP7 414 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 CACNA2D4Q7Z3S7 1137 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 FUKQ8N0W3 1084 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 ANKRD52Q8NB46 1076 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 RBBP8NLQ8NC74 664 aaPredicted RBP13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 ELMO3Q96BJ8 720 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 SPAG5Q96R06 1193 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 TWNKQ96RR1 684 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 MED10Q9BTT4 135 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 DUSP16Q9BY84 665 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 B3GNT5Q9BYG0 378 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 GANQ9H2C0 597 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 DPEP3Q9H4B8 488 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 PIDD1Q9HB75 910 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 TMLHEQ9NVH6 421 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 IFNKQ9P0W0 207 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 THEGQ9P2T0 379 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 HESX1Q9UBX0 185 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 SLC27A5Q9Y2P5 690 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 ZFP37Q9Y6Q3 630 aaPredicted RBP13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 CDH23Q9H251 3354 aa13.4□□□□□ -0.26
SPTLC1-204ENST00000469778 ITIH6Q6UXX5 1313 aa13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 MTCL1Q9Y4B5 1905 aaKnown RBP13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 A0A1W2PQJ5 194 aa13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 TEX33O43247 280 aa13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 FAM200BP0CF97 657 aa13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 CD19P15391 556 aa13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 BDNFP23560 247 aa13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 CYP2F1P24903 491 aa13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 GRIK1P39086 918 aa13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 STAT1P42224 750 aa13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 PPP3CCP48454 512 aa13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 POLR2FP61218 127 aaKnown RBP13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 TAF12Q16514 161 aa13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 ARHGAP44Q17R89 818 aa13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 PABPC1LQ4VXU2 614 aaKnown RBP13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 ZNF394Q53GI3 561 aa13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 CYP4A22Q5TCH4 519 aa13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 DNAJB7Q7Z6W7 309 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms