RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 TMEM209Q96SK2 561 aa9.11□□□□□ -0.95
SSBP1-208ENST00000469123 PI4K2AQ9BTU6 479 aa9.11□□□□□ -0.95
SSBP1-208ENST00000469123 APOL5Q9BWW9 433 aa9.11□□□□□ -0.95
SSBP1-208ENST00000469123 PNPLA8Q9NP80 782 aa9.11□□□□□ -0.95
SSBP1-208ENST00000469123 CISHQ9NSE2 258 aa9.11□□□□□ -0.95
SSBP1-208ENST00000469123 COMMD8Q9NX08 183 aa9.11□□□□□ -0.95
SSBP1-208ENST00000469123 GCNT4Q9P109 453 aa9.11□□□□□ -0.95
SSBP1-208ENST00000469123 EPS15L1Q9UBC2 864 aa9.11□□□□□ -0.95
SSBP1-208ENST00000469123 GTF3C4Q9UKN8 822 aa9.11□□□□□ -0.95
SSBP1-208ENST00000469123 POLIQ9UNA4 740 aa9.11□□□□□ -0.95
SSBP1-208ENST00000469123 REV3LO60673 3130 aa9.11□□□□□ -0.95
SSBP1-208ENST00000469123 NOTCH4Q99466 2003 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 DENND4CQ5VZ89 1909 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 MYBPHLA2RUH7 354 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 BECN2A8MW95 431 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 VNN2O95498 520 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 PAEPP09466 180 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 PDGFRBP09619 1106 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 PFKLP17858 780 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 BRD2P25440 801 aaKnown RBP9.1□□□□□ -0.95
SSBP1-208ENST00000469123 DDX6P26196 483 aaKnown RBP eCLIP9.1□□□□□ -0.95
SSBP1-208ENST00000469123 SSTR3P32745 418 aaPredicted RBP9.1□□□□□ -0.95
SSBP1-208ENST00000469123 PPP3CCP48454 512 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 PDE6CP51160 858 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 NDST1P52848 882 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 MFAP3P55082 362 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 SLC8A3P57103 927 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 PSMC1P62191 440 aaKnown RBP9.1□□□□□ -0.95
SSBP1-208ENST00000469123 CYP27A1Q02318 531 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 STILQ15468 1287 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 VWA3BQ502W6 1294 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 ARHGAP15Q53QZ3 475 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 MDH1BQ5I0G3 518 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 FKBP15Q5T1M5 1219 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 CDKAL1Q5VV42 579 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 SCARA3Q6AZY7 606 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 SPOPLQ6IQ16 392 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 MTSS1LQ765P7 747 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 GRASPQ7Z6J2 395 aaPredicted RBP9.1□□□□□ -0.95
SSBP1-208ENST00000469123 GJD3Q8N144 294 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 LMO3Q8TAP4 145 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 FAM200AQ8TCP9 573 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 MYLPFQ96A32 169 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 TRMT2BQ96GJ1 504 aaKnown RBP9.1□□□□□ -0.95
SSBP1-208ENST00000469123 PCED1BQ96HM7 432 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 DNAJC25Q9H1X3 360 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 NDST4Q9H3R1 872 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 CRTAC1Q9NQ79 661 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 IGSF9Q9P2J2 1179 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 DNMT3BQ9UBC3 853 aaKnown RBP9.1□□□□□ -0.95
SSBP1-208ENST00000469123 CDH7Q9ULB5 785 aa9.1□□□□□ -0.95
SSBP1-208ENST00000469123 GREB1Q4ZG55 1949 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 LRRC10BA6NIK2 292 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 NOL4O94818 638 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 RTN3O95197 1032 aaPredicted RBP9.09□□□□□ -0.95
SSBP1-208ENST00000469123 WEE2P0C1S8 567 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 FAM200BP0CF97 657 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 ALADP13716 330 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 CDK11BP21127 795 aaKnown RBP9.09□□□□□ -0.95
SSBP1-208ENST00000469123 CYP2F1P24903 491 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 WEE1P30291 646 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 GRIK1P39086 918 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 RAP1GAPP47736 663 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 ZNF165P49910 485 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 CDH8P55286 799 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 MEA1Q16626 185 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 ANO6Q4KMQ2 910 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 ARHGAP17Q68EM7 881 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 TRIM65Q6PJ69 517 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 C11orf57Q6ZUT1 292 aaPredicted RBP9.09□□□□□ -0.95
SSBP1-208ENST00000469123 DNAJB7Q7Z6W7 309 aaPredicted RBP9.09□□□□□ -0.95
SSBP1-208ENST00000469123 FAM35AQ86V20 835 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 PPM1KQ8N3J5 372 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 OVCA2Q8WZ82 227 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 E2F7Q96AV8 911 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 TMEM176AQ96HP8 235 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 RPGRIP1Q96KN7 1286 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 MYRFLQ96LU7 910 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 HNRNPABQ99729 332 aaKnown RBP9.09□□□□□ -0.95
SSBP1-208ENST00000469123 CORO1BQ9BR76 489 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 FUCA2Q9BTY2 467 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 INTS2Q9H0H0 1204 aaKnown RBP9.09□□□□□ -0.95
SSBP1-208ENST00000469123 SDCBP2Q9H190 292 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 CRISPLD1Q9H336 500 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 DMAP1Q9NPF5 467 aaPredicted RBP9.09□□□□□ -0.95
SSBP1-208ENST00000469123 SAMSN1Q9NSI8 373 aaKnown RBP9.09□□□□□ -0.95
SSBP1-208ENST00000469123 TMLHEQ9NVH6 421 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 CEP72Q9P209 647 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 SLC27A5Q9Y2P5 690 aa9.09□□□□□ -0.95
SSBP1-208ENST00000469123 MRPS23Q9Y3D9 190 aaKnown RBP9.09□□□□□ -0.95
SSBP1-208ENST00000469123 ZNF638Q14966 1978 aaKnown RBP9.09□□□□□ -0.95
SSBP1-208ENST00000469123 NCANO14594 1321 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 SYCE3A1L190 88 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 TNFRSF10AO00220 468 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 VDRP11473 427 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 LAMP2P13473 410 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 ZNF18P17022 549 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 ATF6P18850 670 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 CD58P19256 250 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 BDNFP23560 247 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms