RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 RAD23BP54727 409 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 GOLGA8FQ08AF8 430 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 GOLGA8DPQ0D2H9 430 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 SMARCB1Q12824 385 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 TBX2Q13207 712 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-216ENST00000468949 SKIV2LQ15477 1246 aaKnown RBP8.62□□□□□ -1.03
HDAC6-216ENST00000468949 GOLGA7BQ2TAP0 167 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 CD300LGQ6UXG3 332 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 CYP26C1Q6V0L0 522 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 CCDC186Q7Z3E2 898 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 SLC47A2Q86VL8 602 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 OSTM1Q86WC4 334 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 ZNF677Q86XU0 584 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 SLC4A11Q8NBS3 891 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 MYLPFQ96A32 169 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 MRPL38Q96DV4 380 aaKnown RBP8.62□□□□□ -1.03
HDAC6-216ENST00000468949 CCDC42Q96M95 316 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 NOX5Q96PH1 765 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 DNAJC7Q99615 494 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 BAG1Q99933 345 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-216ENST00000468949 ELOVL4Q9GZR5 314 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 DPEP3Q9H4B8 488 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 SYNCQ9H7C4 482 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 LUC7LQ9NQ29 371 aaKnown RBP8.62□□□□□ -1.03
HDAC6-216ENST00000468949 KRT82Q9NSB4 513 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 ABI2Q9NYB9 513 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-216ENST00000468949 AIPL1Q9NZN9 384 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 MTRRQ9UBK8 725 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 PCDHB5Q9Y5E4 795 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 BACE2Q9Y5Z0 518 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 SCN1AP35498 2009 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 PRRG1O14668 218 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 AKR1B10O60218 316 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 OR4Q2P0C623 313 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 LINC00271P0C7V0 271 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 SRGAP2BP0DMP2 458 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 CCDC130P13994 396 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 RPL17P18621 184 aaKnown RBP8.61□□□□□ -1.03
HDAC6-216ENST00000468949 LMO2P25791 158 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 OR1D2P34982 312 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 ZNF132P52740 706 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 SNX16P57768 344 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 PTPN14Q15678 1187 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 CCDC85BQ15834 202 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-216ENST00000468949 MGAT5BQ3V5L5 792 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 LIN9Q5TKA1 542 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 DPY19L2P1Q6NXN4 242 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 PPP1R2P3Q6NXS1 205 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 TRIM72Q6ZMU5 477 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 TAS1R1Q7RTX1 841 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 LIMS2Q7Z4I7 341 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 FAM35AQ86V20 835 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 GPR65Q8IYL9 337 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 RNF168Q8IYW5 571 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-216ENST00000468949 UBR7Q8N806 425 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 TC2NQ8N9U0 490 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 OR10T2Q8NGX3 314 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 LNX1Q8TBB1 728 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-216ENST00000468949 MYCBPAPQ8TBZ2 947 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 SPPL3Q8TCT6 385 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 SPPL2BQ8TCT7 592 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 SLC2A14Q8TDB8 520 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 EPS8L1Q8TE68 723 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 IPO4Q8TEX9 1081 aaKnown RBP8.61□□□□□ -1.03
HDAC6-216ENST00000468949 C2orf15Q8WU43 125 aaKnown RBP8.61□□□□□ -1.03
HDAC6-216ENST00000468949 ATXN2LQ8WWM7 1075 aaKnown RBP8.61□□□□□ -1.03
HDAC6-216ENST00000468949 AUTS2Q8WXX7 1259 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 CYFIP2Q96F07 1278 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 SMARCD1Q96GM5 515 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 PGLYRP2Q96PD5 576 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 TWNKQ96RR1 684 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 SEPT5Q99719 369 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-216ENST00000468949 VN1R3Q9BXE9 311 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 GPR88Q9GZN0 384 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 ZCWPW1Q9H0M4 648 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 HAUS4Q9H6D7 363 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 CHST7Q9NS84 486 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 FNIP2Q9P278 1114 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 DPP7Q9UHL4 492 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 GTF3C4Q9UKN8 822 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 TSPAN16Q9UKR8 245 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 CNTN6Q9UQ52 1028 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 TRANK1O15050 2925 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 TSC2P49815 1807 aa8.61□□□□□ -1.03
HDAC6-216ENST00000468949 PLXNA4Q9HCM2 1894 aa8.6□□□□□ -1.03
HDAC6-216ENST00000468949 EYSQ5T1H1 3165 aa8.6□□□□□ -1.03
HDAC6-216ENST00000468949 SSU72P8A0A1W2PR75 194 aa8.6□□□□□ -1.03
HDAC6-216ENST00000468949 TRIM66O15016 1216 aa8.6□□□□□ -1.03
HDAC6-216ENST00000468949 GRM6O15303 877 aa8.6□□□□□ -1.03
HDAC6-216ENST00000468949 HCRTO43612 131 aa8.6□□□□□ -1.03
HDAC6-216ENST00000468949 ATP2C2O75185 946 aa8.6□□□□□ -1.03
HDAC6-216ENST00000468949 AP1G2O75843 785 aa8.6□□□□□ -1.03
HDAC6-216ENST00000468949 MICAL2O94851 1124 aa8.6□□□□□ -1.03
HDAC6-216ENST00000468949 LSM8O95777 96 aaKnown RBP8.6□□□□□ -1.03
HDAC6-216ENST00000468949 GLUD1P00367 558 aa8.6□□□□□ -1.03
HDAC6-216ENST00000468949 MMEP08473 750 aa8.6□□□□□ -1.03
HDAC6-216ENST00000468949 SETSIPP0DME0 302 aa8.6□□□□□ -1.03
HDAC6-216ENST00000468949 SKILP12757 684 aa8.6□□□□□ -1.03
HDAC6-216ENST00000468949 CLCN1P35523 988 aa8.6□□□□□ -1.03
HDAC6-216ENST00000468949 GRIK1P39086 918 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms