RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 LRRC8BQ6P9F7 803 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 LINC00299Q6ZSB3 139 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 SYDE1Q6ZW31 735 aaPredicted RBP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 KRT27Q7Z3Y8 459 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 KIAA0907Q7Z7F0 614 aaPredicted RBP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 SLC51AQ86UW1 340 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 SGMS1Q86VZ5 419 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 CCNJLQ8IV13 435 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 WDR75Q8IWA0 830 aaKnown RBP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 ADSSL1Q8N142 457 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 AHI1Q8N157 1196 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 VPS52Q8N1B4 723 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 BBOF1Q8ND07 529 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 FBLIM1Q8WUP2 373 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 STARD8Q92502 1023 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 ANKS1AQ92625 1134 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 ARHGEF2Q92974 986 aaKnown RBP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 WNT8BQ93098 351 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 MED30Q96HR3 178 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 DEPDC7Q96QD5 511 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 MED15Q96RN5 788 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 TGS1Q96RS0 853 aaKnown RBP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 ERP44Q9BS26 406 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 KLHL4Q9C0H6 718 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 LRRC27Q9C0I9 530 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 ADAM7Q9H2U9 754 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 DENND2DQ9H6A0 471 aaPredicted RBP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 SSU72Q9NP77 194 aaKnown RBP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 SEPT10Q9P0V9 454 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 DBF4Q9UBU7 674 aaPredicted RBP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 TRIM10Q9UDY6 481 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 RSL24D1Q9UHA3 163 aaKnown RBP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 GNPTGQ9UJJ9 305 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 ZNF180Q9UJW8 692 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 FBXO9Q9UK97 447 aaPredicted RBP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 SORCS3Q9UPU3 1222 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 APOBEC2Q9Y235 224 aaKnown RBP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 ITM2BQ9Y287 266 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 ZNF711Q9Y462 761 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 SLC30A1Q9Y6M5 507 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 SCINQ9Y6U3 715 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 PCDH11XQ9BZA7 1347 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 MYO5AQ9Y4I1 1855 aaKnown RBP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 FAM221BA6H8Z2 402 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 FAM83GA6ND36 823 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 SYCE1LA8MT33 242 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 GNAT3A8MTJ3 354 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 KRTAP9-7A8MTY7 169 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 KIF28PB7ZC32 967 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 FAM47E-STBD1D6RA91 191 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 EIF3FO00303 357 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-207ENST00000468925 GYG2O15488 501 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 PDE8AO60658 829 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 CDH16O75309 829 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 SPAG7O75391 227 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 RHOBTB3O94955 611 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 TGDSO95455 350 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 TTLL1O95922 423 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 APOEP02649 317 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 HSPD1P10809 573 aaKnown RBP5.1□□□□□ -1.59
SF3B1-207ENST00000468925 CDK4P11802 303 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 GNAT2P19087 354 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 SPINK2P20155 84 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 MUTP22033 750 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 CCNE1P24864 410 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 HOXD10P28358 340 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 CHRNA3P32297 505 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 MYH10P35580 1976 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 MTIF2P46199 727 aaKnown RBP5.1□□□□□ -1.59
SF3B1-207ENST00000468925 HNRNPFP52597 415 aaKnown RBP5.1□□□□□ -1.59
SF3B1-207ENST00000468925 PTENP60484 403 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 DLG4P78352 724 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 COG7P83436 770 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 CYP4A11Q02928 519 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 NSUN2Q08J23 767 aaKnown RBP eCLIP5.1□□□□□ -1.59
SF3B1-207ENST00000468925 EIF4A2Q14240 407 aaKnown RBP5.1□□□□□ -1.59
SF3B1-207ENST00000468925 SPARCL1Q14515 664 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 KRT81Q14533 505 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 RASA2Q15283 850 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 SLC18A3Q16572 532 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 ASTE1Q2TB18 679 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-207ENST00000468925 ZNF829Q3KNS6 432 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-207ENST00000468925 USP41Q3LFD5 358 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 WDR72Q3MJ13 1102 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 ANKRD20A4Q4UJ75 823 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 CYP4A22Q5TCH4 519 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 PEAR1Q5VY43 1037 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-207ENST00000468925 DUPD1Q68J44 220 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 ALKBH2Q6NS38 261 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 CDPF1Q6NVV7 123 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 KYAT3Q6YP21 454 aaKnown RBP5.1□□□□□ -1.59
SF3B1-207ENST00000468925 AGMOQ6ZNB7 445 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 ANO5Q75V66 913 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 ZNF589Q86UQ0 364 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-207ENST00000468925 TMPRSS6Q8IU80 811 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 ADGRA3Q8IWK6 1321 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 KIF2BQ8N4N8 673 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 MARVELD2Q8N4S9 558 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 SPERTQ8NA61 448 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 ICA1LQ8NDH6 482 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms