RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 LRRC27Q9C0I9 530 aa6.66□□□□□ -1.34
XRN1-207ENST00000468894 SHOC2Q9UQ13 582 aa6.66□□□□□ -1.34
XRN1-207ENST00000468894 SSX2IPQ9Y2D8 614 aa6.66□□□□□ -1.34
XRN1-207ENST00000468894 PPM1DO15297 605 aa6.65□□□□□ -1.34
XRN1-207ENST00000468894 MGEA5O60502 916 aa6.65□□□□□ -1.34
XRN1-207ENST00000468894 CYP2C9P11712 490 aa6.65□□□□□ -1.34
XRN1-207ENST00000468894 CLK3P49761 638 aaKnown RBP6.65□□□□□ -1.34
XRN1-207ENST00000468894 FMO1Q01740 532 aa6.65□□□□□ -1.34
XRN1-207ENST00000468894 ARHGAP40Q5TG30 622 aa6.65□□□□□ -1.34
XRN1-207ENST00000468894 RGS7BPQ6MZT1 257 aaPredicted RBP6.65□□□□□ -1.34
XRN1-207ENST00000468894 GAS2L3Q86XJ1 694 aa6.65□□□□□ -1.34
XRN1-207ENST00000468894 ZNF280BQ86YH2 543 aa6.65□□□□□ -1.34
XRN1-207ENST00000468894 MPP5Q8N3R9 675 aa6.65□□□□□ -1.34
XRN1-207ENST00000468894 FKBP10Q96AY3 582 aa6.65□□□□□ -1.34
XRN1-207ENST00000468894 NMD3Q96D46 503 aaKnown RBP6.65□□□□□ -1.34
XRN1-207ENST00000468894 ZNF518BQ9C0D4 1074 aa6.65□□□□□ -1.34
XRN1-207ENST00000468894 MS4A7Q9GZW8 240 aaPredicted RBP6.65□□□□□ -1.34
XRN1-207ENST00000468894 PRDM13Q9H4Q3 707 aa6.65□□□□□ -1.34
XRN1-207ENST00000468894 SLITRK6Q9H5Y7 841 aa6.65□□□□□ -1.34
XRN1-207ENST00000468894 KLC4Q9NSK0 619 aa6.65□□□□□ -1.34
XRN1-207ENST00000468894 SACM1LQ9NTJ5 587 aa6.65□□□□□ -1.34
XRN1-207ENST00000468894 AFF4Q9UHB7 1163 aaKnown RBP6.65□□□□□ -1.34
XRN1-207ENST00000468894 SERTAD3Q9UJW9 196 aa6.65□□□□□ -1.34
XRN1-207ENST00000468894 hCG_1984214I3L0E3 225 aa6.64□□□□□ -1.35
XRN1-207ENST00000468894 ELFN1P0C7U0 828 aa6.64□□□□□ -1.35
XRN1-207ENST00000468894 PCSK6P29122 969 aa6.64□□□□□ -1.35
XRN1-207ENST00000468894 SP2Q02086 613 aa6.64□□□□□ -1.35
XRN1-207ENST00000468894 EIF2B5Q13144 721 aaKnown RBP6.64□□□□□ -1.35
XRN1-207ENST00000468894 C3orf38Q5JPI3 329 aa6.64□□□□□ -1.35
XRN1-207ENST00000468894 ICE2Q659A1 982 aa6.64□□□□□ -1.35
XRN1-207ENST00000468894 KAZNQ674X7 775 aa6.64□□□□□ -1.35
XRN1-207ENST00000468894 SFRP4Q6FHJ7 346 aaPredicted RBP6.64□□□□□ -1.35
XRN1-207ENST00000468894 SESTD1Q86VW0 696 aa6.64□□□□□ -1.35
XRN1-207ENST00000468894 RAPGEF4Q8WZA2 1011 aa6.64□□□□□ -1.35
XRN1-207ENST00000468894 RFKQ969G6 155 aa6.64□□□□□ -1.35
XRN1-207ENST00000468894 TTC17Q96AE7 1141 aa6.64□□□□□ -1.35
XRN1-207ENST00000468894 PBKQ96KB5 322 aa6.64□□□□□ -1.35
XRN1-207ENST00000468894 NELL2Q99435 816 aa6.64□□□□□ -1.35
XRN1-207ENST00000468894 CXorf36Q9H7Y0 433 aa6.64□□□□□ -1.35
XRN1-207ENST00000468894 COL20A1Q9P218 1284 aa6.64□□□□□ -1.35
XRN1-207ENST00000468894 DKK3Q9UBP4 350 aa6.64□□□□□ -1.35
XRN1-207ENST00000468894 OGDHLQ9ULD0 1010 aa6.64□□□□□ -1.35
XRN1-207ENST00000468894 NDRG4Q9ULP0 352 aaKnown RBP6.64□□□□□ -1.35
XRN1-207ENST00000468894 MRPS17Q9Y2R5 130 aaKnown RBP6.64□□□□□ -1.35
XRN1-207ENST00000468894 PAXBP1Q9Y5B6 917 aa6.64□□□□□ -1.35
XRN1-207ENST00000468894 MBD3L4A6NDZ8 208 aaPredicted RBP6.63□□□□□ -1.35
XRN1-207ENST00000468894 MBD3L3A6NE82 208 aaPredicted RBP6.63□□□□□ -1.35
XRN1-207ENST00000468894 KIF3BO15066 747 aa6.63□□□□□ -1.35
XRN1-207ENST00000468894 MAP4K4O95819 1239 aaPredicted RBP6.63□□□□□ -1.35
XRN1-207ENST00000468894 XRCC6P12956 609 aaKnown RBP eCLIP6.63□□□□□ -1.35
XRN1-207ENST00000468894 GRIA3P42263 894 aa6.63□□□□□ -1.35
XRN1-207ENST00000468894 RARRES1P49788 294 aa6.63□□□□□ -1.35
XRN1-207ENST00000468894 RPS16P62249 146 aaKnown RBP6.63□□□□□ -1.35
XRN1-207ENST00000468894 MYO1EQ12965 1108 aa6.63□□□□□ -1.35
XRN1-207ENST00000468894 SLC44A4Q53GD3 710 aa6.63□□□□□ -1.35
XRN1-207ENST00000468894 PLA1AQ53H76 456 aa6.63□□□□□ -1.35
XRN1-207ENST00000468894 SIMC1Q8NDZ2 872 aa6.63□□□□□ -1.35
XRN1-207ENST00000468894 ATG4AQ8WYN0 398 aa6.63□□□□□ -1.35
XRN1-207ENST00000468894 APOL5Q9BWW9 433 aa6.63□□□□□ -1.35
XRN1-207ENST00000468894 KIAA1586Q9HCI6 787 aa6.63□□□□□ -1.35
XRN1-207ENST00000468894 TBC1D30Q9Y2I9 924 aa6.63□□□□□ -1.35
XRN1-207ENST00000468894 LINC00473A8K010 186 aa6.62□□□□□ -1.35
XRN1-207ENST00000468894 PYCARD-AS1I3L0S3 204 aa6.62□□□□□ -1.35
XRN1-207ENST00000468894 KIAA0355O15063 1070 aa6.62□□□□□ -1.35
XRN1-207ENST00000468894 CSF1RP07333 972 aa6.62□□□□□ -1.35
XRN1-207ENST00000468894 LRPAP1P30533 357 aa6.62□□□□□ -1.35
XRN1-207ENST00000468894 GNALP38405 381 aa6.62□□□□□ -1.35
XRN1-207ENST00000468894 INHBEP58166 350 aa6.62□□□□□ -1.35
XRN1-207ENST00000468894 KRT17Q04695 432 aa6.62□□□□□ -1.35
XRN1-207ENST00000468894 TBCCQ15814 346 aa6.62□□□□□ -1.35
XRN1-207ENST00000468894 HSP90AB2PQ58FF8 381 aa6.62□□□□□ -1.35
XRN1-207ENST00000468894 ZDHHC24Q6UX98 284 aa6.62□□□□□ -1.35
XRN1-207ENST00000468894 MAVSQ7Z434 540 aa6.62□□□□□ -1.35
XRN1-207ENST00000468894 KRT78Q8N1N4 520 aa6.62□□□□□ -1.35
XRN1-207ENST00000468894 ALG8Q9BVK2 526 aa6.62□□□□□ -1.35
XRN1-207ENST00000468894 BTBD1Q9H0C5 482 aa6.62□□□□□ -1.35
XRN1-207ENST00000468894 ZNF287Q9HBT7 754 aa6.62□□□□□ -1.35
XRN1-207ENST00000468894 A1CFQ9NQ94 594 aaKnown RBP6.62□□□□□ -1.35
XRN1-207ENST00000468894 URI1O94763 535 aaPredicted RBP6.61□□□□□ -1.35
XRN1-207ENST00000468894 ERBB2P04626 1255 aa6.61□□□□□ -1.35
XRN1-207ENST00000468894 IL1R1P14778 569 aa6.61□□□□□ -1.35
XRN1-207ENST00000468894 KCNA3P22001 575 aa6.61□□□□□ -1.35
XRN1-207ENST00000468894 BMP5P22003 454 aa6.61□□□□□ -1.35
XRN1-207ENST00000468894 KLRC1P26715 233 aa6.61□□□□□ -1.35
XRN1-207ENST00000468894 CLCN2P51788 898 aa6.61□□□□□ -1.35
XRN1-207ENST00000468894 DGKEP52429 567 aa6.61□□□□□ -1.35
XRN1-207ENST00000468894 ERCC6LQ2NKX8 1250 aa6.61□□□□□ -1.35
XRN1-207ENST00000468894 MGAT5BQ3V5L5 792 aa6.61□□□□□ -1.35
XRN1-207ENST00000468894 ZNF362Q5T0B9 420 aaPredicted RBP6.61□□□□□ -1.35
XRN1-207ENST00000468894 DTX2Q86UW9 622 aa6.61□□□□□ -1.35
XRN1-207ENST00000468894 MSLNLQ96KJ4 702 aa6.61□□□□□ -1.35
XRN1-207ENST00000468894 SARGQ9BW04 601 aa6.61□□□□□ -1.35
XRN1-207ENST00000468894 EHD3Q9NZN3 535 aa6.61□□□□□ -1.35
XRN1-207ENST00000468894 FAM50BQ9Y247 325 aa6.61□□□□□ -1.35
XRN1-207ENST00000468894 CCDC151A5D8V7 595 aa6.6□□□□□ -1.35
XRN1-207ENST00000468894 ZKSCAN1P17029 563 aaPredicted RBP6.6□□□□□ -1.35
XRN1-207ENST00000468894 PTH2RP49190 550 aa6.6□□□□□ -1.35
XRN1-207ENST00000468894 SATB1Q01826 763 aa6.6□□□□□ -1.35
XRN1-207ENST00000468894 E2F2Q14209 437 aa6.6□□□□□ -1.35
XRN1-207ENST00000468894 TEDDM1Q5T9Z0 273 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms