RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, human

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSB-208	ENST00000468600	ADAMTS3	O15072	1205 aa		4.39	□□□□□ -1.71
SSB-208	ENST00000468600	KIF20A	O95235	890 aa		4.39	□□□□□ -1.71
SSB-208	ENST00000468600	GNAI2	P04899	355 aa		4.39	□□□□□ -1.71
SSB-208	ENST00000468600	NHLRC4	P0CG21	123 aa	Predicted RBP	4.39	□□□□□ -1.71
SSB-208	ENST00000468600	SCP2	P22307	547 aa		4.39	□□□□□ -1.71
SSB-208	ENST00000468600	GUCY2F	P51841	1108 aa		4.39	□□□□□ -1.71
SSB-208	ENST00000468600	NOG	Q13253	232 aa		4.39	□□□□□ -1.71
SSB-208	ENST00000468600	FAM160B1	Q5W0V3	765 aa		4.39	□□□□□ -1.71
SSB-208	ENST00000468600	ICE2	Q659A1	982 aa		4.39	□□□□□ -1.71
SSB-208	ENST00000468600	CATSPERG	Q6ZRH7	1159 aa		4.39	□□□□□ -1.71
SSB-208	ENST00000468600	MRPL10	Q7Z7H8	261 aa	Known RBP	4.39	□□□□□ -1.71
SSB-208	ENST00000468600	PRR18	Q8N4B5	295 aa		4.39	□□□□□ -1.71
SSB-208	ENST00000468600	FAM167A	Q96KS9	214 aa		4.39	□□□□□ -1.71
SSB-208	ENST00000468600	MRPL46	Q9H2W6	279 aa	Known RBP	4.39	□□□□□ -1.71
SSB-208	ENST00000468600	TRNAU1AP	Q9NX07	287 aa	Known RBP	4.39	□□□□□ -1.71
SSB-208	ENST00000468600	DLL3	Q9NYJ7	618 aa		4.39	□□□□□ -1.71
SSB-208	ENST00000468600	ZNF112	Q9UJU3	913 aa		4.39	□□□□□ -1.71
SSB-208	ENST00000468600	AFG3L2	Q9Y4W6	797 aa		4.39	□□□□□ -1.71
SSB-208	ENST00000468600	CYP2D7	A0A087X1C5	515 aa		4.38	□□□□□ -1.71
SSB-208	ENST00000468600	LRRC14B	A6NHZ5	514 aa		4.38	□□□□□ -1.71
SSB-208	ENST00000468600	PPM1D	O15297	605 aa		4.38	□□□□□ -1.71
SSB-208	ENST00000468600	SLC16A3	O15427	465 aa	Known RBP	4.38	□□□□□ -1.71
SSB-208	ENST00000468600	ZRANB2	O95218	330 aa	Known RBP eCLIP	4.38	□□□□□ -1.71
SSB-208	ENST00000468600	CDK11B	P21127	795 aa	Known RBP	4.38	□□□□□ -1.71
SSB-208	ENST00000468600	EEFSEC	P57772	596 aa	Known RBP	4.38	□□□□□ -1.71
SSB-208	ENST00000468600	ITK	Q08881	620 aa		4.38	□□□□□ -1.71
SSB-208	ENST00000468600	ODF1	Q14990	250 aa		4.38	□□□□□ -1.71
SSB-208	ENST00000468600	EMC10	Q5UCC4	262 aa		4.38	□□□□□ -1.71
SSB-208	ENST00000468600	MIS18BP1	Q6P0N0	1132 aa		4.38	□□□□□ -1.71
SSB-208	ENST00000468600	MIER2	Q8N344	545 aa		4.38	□□□□□ -1.71
SSB-208	ENST00000468600	NANOGP1	Q8N7R0	232 aa		4.38	□□□□□ -1.71
SSB-208	ENST00000468600	PIGO	Q8TEQ8	1089 aa		4.38	□□□□□ -1.71
SSB-208	ENST00000468600	PUS7	Q96PZ0	661 aa	Known RBP	4.38	□□□□□ -1.71
SSB-208	ENST00000468600	C1orf43	Q9BWL3	253 aa		4.38	□□□□□ -1.71
SSB-208	ENST00000468600	CCDC8	Q9H0W5	538 aa	Predicted RBP	4.38	□□□□□ -1.71
SSB-208	ENST00000468600	PCDHA3	Q9Y5H8	950 aa		4.38	□□□□□ -1.71
SSB-208	ENST00000468600	QSOX1	O00391	747 aa		4.37	□□□□□ -1.71
SSB-208	ENST00000468600	VPS4B	O75351	444 aa		4.37	□□□□□ -1.71
SSB-208	ENST00000468600	IL6R	P08887	468 aa	Predicted RBP	4.37	□□□□□ -1.71
SSB-208	ENST00000468600	CHRM3	P20309	590 aa		4.37	□□□□□ -1.71
SSB-208	ENST00000468600	PPIF	P30405	207 aa	Known RBP	4.37	□□□□□ -1.71
SSB-208	ENST00000468600	BOP1	Q14137	746 aa	Known RBP	4.37	□□□□□ -1.71
SSB-208	ENST00000468600	TMEM108	Q6UXF1	575 aa		4.37	□□□□□ -1.71
SSB-208	ENST00000468600	MAVS	Q7Z434	540 aa		4.37	□□□□□ -1.71
SSB-208	ENST00000468600	PNMA8A	Q86V59	439 aa	Predicted RBP	4.37	□□□□□ -1.71
SSB-208	ENST00000468600	PNLDC1	Q8NA58	520 aa	Known RBP	4.37	□□□□□ -1.71
SSB-208	ENST00000468600	RP9	Q8TA86	221 aa	Known RBP	4.37	□□□□□ -1.71
SSB-208	ENST00000468600	MARK4	Q96L34	752 aa		4.37	□□□□□ -1.71
SSB-208	ENST00000468600	CAMKK2	Q96RR4	588 aa		4.37	□□□□□ -1.71
SSB-208	ENST00000468600	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	4.37	□□□□□ -1.71
SSB-208	ENST00000468600	SPEF1	Q9Y4P9	236 aa		4.37	□□□□□ -1.71
SSB-208	ENST00000468600	FAM90A10P	A6NDY2	464 aa		4.36	□□□□□ -1.71
SSB-208	ENST00000468600	ALG1L2	C9J202	215 aa		4.36	□□□□□ -1.71
SSB-208	ENST00000468600	DTNB	O60941	627 aa		4.36	□□□□□ -1.71
SSB-208	ENST00000468600	TJP3	O95049	919 aa		4.36	□□□□□ -1.71
SSB-208	ENST00000468600	PDHA1	P08559	390 aa		4.36	□□□□□ -1.71
SSB-208	ENST00000468600	PIM1	P11309	404 aa	Predicted RBP	4.36	□□□□□ -1.71
SSB-208	ENST00000468600	TYR	P14679	529 aa		4.36	□□□□□ -1.71
SSB-208	ENST00000468600	PDC	P20941	246 aa		4.36	□□□□□ -1.71
SSB-208	ENST00000468600	CYP2C18	P33260	490 aa		4.36	□□□□□ -1.71
SSB-208	ENST00000468600	PHKA1	P46020	1223 aa		4.36	□□□□□ -1.71
SSB-208	ENST00000468600	HOXA4	Q00056	320 aa	Predicted RBP	4.36	□□□□□ -1.71
SSB-208	ENST00000468600	PTPN21	Q16825	1174 aa		4.36	□□□□□ -1.71
SSB-208	ENST00000468600	MEPCE	Q7L2J0	689 aa	Known RBP	4.36	□□□□□ -1.71
SSB-208	ENST00000468600	HEATR3	Q7Z4Q2	680 aa		4.36	□□□□□ -1.71
SSB-208	ENST00000468600	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
SSB-208	ENST00000468600	TNPO1	Q92973	898 aa	Known RBP	4.36	□□□□□ -1.71
SSB-208	ENST00000468600	C5orf34	Q96MH7	638 aa		4.36	□□□□□ -1.71
SSB-208	ENST00000468600	ASB2	Q96Q27	587 aa		4.36	□□□□□ -1.71
SSB-208	ENST00000468600	FSD1L	Q9BXM9	530 aa		4.36	□□□□□ -1.71
SSB-208	ENST00000468600	SLAMF7	Q9NQ25	335 aa		4.36	□□□□□ -1.71
SSB-208	ENST00000468600	PDGFC	Q9NRA1	345 aa		4.36	□□□□□ -1.71
SSB-208	ENST00000468600	DUSP22	Q9NRW4	184 aa		4.36	□□□□□ -1.71
SSB-208	ENST00000468600	ABCF2	Q9UG63	623 aa		4.36	□□□□□ -1.71
SSB-208	ENST00000468600	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.36	□□□□□ -1.71
SSB-208	ENST00000468600	SSX2IP	Q9Y2D8	614 aa		4.36	□□□□□ -1.71
SSB-208	ENST00000468600	TNKS	O95271	1327 aa		4.36	□□□□□ -1.71
SSB-208	ENST00000468600		M0QYG6	137 aa		4.35	□□□□□ -1.71
SSB-208	ENST00000468600	KATNA1	O75449	491 aa		4.35	□□□□□ -1.71
SSB-208	ENST00000468600	FGB	P02675	491 aa		4.35	□□□□□ -1.71
SSB-208	ENST00000468600	ATXN1L	P0C7T5	689 aa	Known RBP	4.35	□□□□□ -1.71
SSB-208	ENST00000468600	LIPA	P38571	399 aa		4.35	□□□□□ -1.71
SSB-208	ENST00000468600	CDKN1C	P49918	316 aa	Predicted RBP	4.35	□□□□□ -1.71
SSB-208	ENST00000468600	LOXL3	P58215	753 aa		4.35	□□□□□ -1.71
SSB-208	ENST00000468600	LINC00205	P59089	165 aa		4.35	□□□□□ -1.71
SSB-208	ENST00000468600	GTF2H3	Q13889	308 aa		4.35	□□□□□ -1.71
SSB-208	ENST00000468600	DAZAP2	Q15038	168 aa	Predicted RBP	4.35	□□□□□ -1.71
SSB-208	ENST00000468600		Q4G0T1	1027 aa		4.35	□□□□□ -1.71
SSB-208	ENST00000468600	PCID2	Q5JVF3	399 aa		4.35	□□□□□ -1.71
SSB-208	ENST00000468600	TREML2	Q5T2D2	321 aa		4.35	□□□□□ -1.71
SSB-208	ENST00000468600	USP45	Q70EL2	814 aa		4.35	□□□□□ -1.71
SSB-208	ENST00000468600	PPP1R3B	Q86XI6	285 aa		4.35	□□□□□ -1.71
SSB-208	ENST00000468600	CPA6	Q8N4T0	437 aa		4.35	□□□□□ -1.71
SSB-208	ENST00000468600	C8orf58	Q8NAV2	365 aa		4.35	□□□□□ -1.71
SSB-208	ENST00000468600	MTMR8	Q96EF0	704 aa		4.35	□□□□□ -1.71
SSB-208	ENST00000468600	PTDSS2	Q9BVG9	487 aa		4.35	□□□□□ -1.71
SSB-208	ENST00000468600	HESX1	Q9UBX0	185 aa		4.35	□□□□□ -1.71
SSB-208	ENST00000468600		E5RJQ4	531 aa		4.34	□□□□□ -1.71
SSB-208	ENST00000468600		H7C1Q1	480 aa		4.34	□□□□□ -1.71
SSB-208	ENST00000468600	DCLK1	O15075	740 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms