RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 CYP2F1P24903 491 aa14.07□□□□□ -0.16
PTPN7-207ENST00000468385 GJB2P29033 226 aa14.07□□□□□ -0.16
PTPN7-207ENST00000468385 POLR2BP30876 1174 aaKnown RBP14.07□□□□□ -0.16
PTPN7-207ENST00000468385 LONP1P36776 959 aaKnown RBP14.07□□□□□ -0.16
PTPN7-207ENST00000468385 USP4Q13107 963 aa14.07□□□□□ -0.16
PTPN7-207ENST00000468385 DMC1Q14565 340 aa14.07□□□□□ -0.16
PTPN7-207ENST00000468385 RNF43Q68DV7 783 aa14.07□□□□□ -0.16
PTPN7-207ENST00000468385 SCARA3Q6AZY7 606 aa14.07□□□□□ -0.16
PTPN7-207ENST00000468385 CPA6Q8N4T0 437 aa14.07□□□□□ -0.16
PTPN7-207ENST00000468385 ZSWIM2Q8NEG5 633 aa14.07□□□□□ -0.16
PTPN7-207ENST00000468385 POMGNT1Q8WZA1 660 aa14.07□□□□□ -0.16
PTPN7-207ENST00000468385 CD101Q93033 1021 aa14.07□□□□□ -0.16
PTPN7-207ENST00000468385 TRMT2BQ96GJ1 504 aaKnown RBP14.07□□□□□ -0.16
PTPN7-207ENST00000468385 MYRFLQ96LU7 910 aa14.07□□□□□ -0.16
PTPN7-207ENST00000468385 ACBD6Q9BR61 282 aa14.07□□□□□ -0.16
PTPN7-207ENST00000468385 STRA6Q9BX79 667 aa14.07□□□□□ -0.16
PTPN7-207ENST00000468385 ABCB6Q9NP58 842 aa14.07□□□□□ -0.16
PTPN7-207ENST00000468385 DUS2Q9NX74 493 aaKnown RBP14.07□□□□□ -0.16
PTPN7-207ENST00000468385 DDX43Q9NXZ2 648 aaKnown RBP14.07□□□□□ -0.16
PTPN7-207ENST00000468385 UXTQ9UBK9 157 aaPredicted RBP14.07□□□□□ -0.16
PTPN7-207ENST00000468385 EBF1Q9UH73 591 aa14.07□□□□□ -0.16
PTPN7-207ENST00000468385 ZNF638Q14966 1978 aaKnown RBP14.06□□□□□ -0.16
PTPN7-207ENST00000468385 LAMA1P25391 3075 aa14.06□□□□□ -0.16
PTPN7-207ENST00000468385 RHOBTB1O94844 696 aa14.06□□□□□ -0.16
PTPN7-207ENST00000468385 APBB3O95704 486 aa14.06□□□□□ -0.16
PTPN7-207ENST00000468385 ITGB3P05106 788 aa14.06□□□□□ -0.16
PTPN7-207ENST00000468385 ACAT1P24752 427 aaKnown RBP14.06□□□□□ -0.16
PTPN7-207ENST00000468385 DDIT3P35638 169 aa14.06□□□□□ -0.16
PTPN7-207ENST00000468385 PNPLA4P41247 253 aa14.06□□□□□ -0.16
PTPN7-207ENST00000468385 RPL10AP62906 217 aaKnown RBP14.06□□□□□ -0.16
PTPN7-207ENST00000468385 CCDC142Q17RM4 750 aa14.06□□□□□ -0.16
PTPN7-207ENST00000468385 EML3Q32P44 896 aa14.06□□□□□ -0.16
PTPN7-207ENST00000468385 INTS6LQ5JSJ4 861 aaKnown RBP14.06□□□□□ -0.16
PTPN7-207ENST00000468385 OSTM1Q86WC4 334 aa14.06□□□□□ -0.16
PTPN7-207ENST00000468385 SFR1Q86XK3 245 aa14.06□□□□□ -0.16
PTPN7-207ENST00000468385 C1orf127Q8N9H9 656 aa14.06□□□□□ -0.16
PTPN7-207ENST00000468385 RASSF8Q8NHQ8 419 aa14.06□□□□□ -0.16
PTPN7-207ENST00000468385 CXorf38Q8TB03 319 aa14.06□□□□□ -0.16
PTPN7-207ENST00000468385 EXOC4Q96A65 974 aa14.06□□□□□ -0.16
PTPN7-207ENST00000468385 HVCN1Q96D96 273 aa14.06□□□□□ -0.16
PTPN7-207ENST00000468385 CYP2S1Q96SQ9 504 aa14.06□□□□□ -0.16
PTPN7-207ENST00000468385 EDEM2Q9BV94 578 aa14.06□□□□□ -0.16
PTPN7-207ENST00000468385 TRPC7Q9HCX4 862 aa14.06□□□□□ -0.16
PTPN7-207ENST00000468385 GTF3C4Q9UKN8 822 aa14.06□□□□□ -0.16
PTPN7-207ENST00000468385 AGAP1Q9UPQ3 857 aa14.06□□□□□ -0.16
PTPN7-207ENST00000468385 WNT6Q9Y6F9 365 aa14.06□□□□□ -0.16
PTPN7-207ENST00000468385 ASPMQ8IZT6 3477 aa14.06□□□□□ -0.16
PTPN7-207ENST00000468385 BCLAF3A2AJT9 711 aaKnown RBP14.05□□□□□ -0.16
PTPN7-207ENST00000468385 HCRTO43612 131 aa14.05□□□□□ -0.16
PTPN7-207ENST00000468385 CAVIN2O95810 425 aa14.05□□□□□ -0.16
PTPN7-207ENST00000468385 USP17L7P0C7H9 530 aa14.05□□□□□ -0.16
PTPN7-207ENST00000468385 IFNAR2P48551 515 aa14.05□□□□□ -0.16
PTPN7-207ENST00000468385 TFAMQ00059 246 aaKnown RBP14.05□□□□□ -0.16
PTPN7-207ENST00000468385 CREB5Q02930 508 aa14.05□□□□□ -0.16
PTPN7-207ENST00000468385 KCNA1Q09470 495 aa14.05□□□□□ -0.16
PTPN7-207ENST00000468385 POSTNQ15063 836 aa14.05□□□□□ -0.16
PTPN7-207ENST00000468385 ELF2Q15723 593 aa14.05□□□□□ -0.16
PTPN7-207ENST00000468385 PSAPL1Q6NUJ1 521 aa14.05□□□□□ -0.16
PTPN7-207ENST00000468385 BRSK2Q8IWQ3 736 aa14.05□□□□□ -0.16
PTPN7-207ENST00000468385 TMEM86AQ8N2M4 240 aa14.05□□□□□ -0.16
PTPN7-207ENST00000468385 KRI1Q8N9T8 703 aaKnown RBP14.05□□□□□ -0.16
PTPN7-207ENST00000468385 SPOCK2Q92563 424 aa14.05□□□□□ -0.16
PTPN7-207ENST00000468385 ATP2A3Q93084 1043 aa14.05□□□□□ -0.16
PTPN7-207ENST00000468385 ACDQ96AP0 544 aa14.05□□□□□ -0.16
PTPN7-207ENST00000468385 TMX3Q96JJ7 454 aa14.05□□□□□ -0.16
PTPN7-207ENST00000468385 FAM84AQ96KN4 292 aa14.05□□□□□ -0.16
PTPN7-207ENST00000468385 FAM213AQ9BRX8 229 aa14.05□□□□□ -0.16
PTPN7-207ENST00000468385 TMEM206Q9H813 350 aa14.05□□□□□ -0.16
PTPN7-207ENST00000468385 GCNT4Q9P109 453 aa14.05□□□□□ -0.16
PTPN7-207ENST00000468385 KIAA1549LQ6ZVL6 1849 aa14.05□□□□□ -0.16
PTPN7-207ENST00000468385 MYO16Q9Y6X6 1858 aa14.04□□□□□ -0.16
PTPN7-207ENST00000468385 TRAV19A0A0A6YYK7 116 aa14.04□□□□□ -0.16
PTPN7-207ENST00000468385 HUS1O60921 280 aa14.04□□□□□ -0.16
PTPN7-207ENST00000468385 BMP15O95972 392 aa14.04□□□□□ -0.16
PTPN7-207ENST00000468385 CKMP06732 381 aa14.04□□□□□ -0.16
PTPN7-207ENST00000468385 TCF3P15923 654 aa14.04□□□□□ -0.16
PTPN7-207ENST00000468385 DGKEP52429 567 aa14.04□□□□□ -0.16
PTPN7-207ENST00000468385 MYL7Q01449 175 aa14.04□□□□□ -0.16
PTPN7-207ENST00000468385 PSMD2Q13200 908 aa14.04□□□□□ -0.16
PTPN7-207ENST00000468385 SF3A1Q15459 793 aaKnown RBP14.04□□□□□ -0.16
PTPN7-207ENST00000468385 CFAP221Q4G0U5 840 aa14.04□□□□□ -0.16
PTPN7-207ENST00000468385 DYMQ7RTS9 669 aa14.04□□□□□ -0.16
PTPN7-207ENST00000468385 LRRC52Q8N7C0 313 aa14.04□□□□□ -0.16
PTPN7-207ENST00000468385 ARL14EPQ8N8R7 260 aaPredicted RBP14.04□□□□□ -0.16
PTPN7-207ENST00000468385 TTC16Q8NEE8 873 aa14.04□□□□□ -0.16
PTPN7-207ENST00000468385 SAAL1Q96ER3 474 aa14.04□□□□□ -0.16
PTPN7-207ENST00000468385 LINC00597Q9H2U6 94 aa14.04□□□□□ -0.16
PTPN7-207ENST00000468385 GDAP2Q9NXN4 497 aa14.04□□□□□ -0.16
PTPN7-207ENST00000468385 LNP1A1A4G5 178 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 C2orf78A6NCI8 922 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 ANTXRLA6NF34 631 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 C4orf47A7E2U8 309 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 GABRDO14764 452 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 GIPC1O14908 333 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 CD2BP2O95400 341 aaKnown RBP14.03□□□□□ -0.16
PTPN7-207ENST00000468385 PROS1P07225 676 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 NOVA1P51513 510 aaKnown RBP14.03□□□□□ -0.16
PTPN7-207ENST00000468385 ZXDBP98169 803 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 RABEP1Q15276 862 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 C8orf34Q49A92 452 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms