RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 IL17RCQ8NAC3 791 aa11.11□□□□□ -0.63
HDAC3-203ENST00000467533 HSPA12BQ96MM6 686 aa11.11□□□□□ -0.63
HDAC3-203ENST00000467533 KIF2CQ99661 725 aa11.11□□□□□ -0.63
HDAC3-203ENST00000467533 ACO2Q99798 780 aaKnown RBP11.11□□□□□ -0.63
HDAC3-203ENST00000467533 TCHPQ9BT92 498 aa11.11□□□□□ -0.63
HDAC3-203ENST00000467533 MRPL4Q9BYD3 311 aaKnown RBP11.11□□□□□ -0.63
HDAC3-203ENST00000467533 TTC12Q9H892 705 aaPredicted RBP11.11□□□□□ -0.63
HDAC3-203ENST00000467533 MAGED2Q9UNF1 606 aaPredicted RBP11.11□□□□□ -0.63
HDAC3-203ENST00000467533 TCHHQ07283 1943 aa11.1□□□□□ -0.63
HDAC3-203ENST00000467533 CYP11B2P19099 503 aa11.1□□□□□ -0.63
HDAC3-203ENST00000467533 TYMPP19971 482 aa11.1□□□□□ -0.63
HDAC3-203ENST00000467533 AARSP49588 968 aaKnown RBP eCLIP11.1□□□□□ -0.63
HDAC3-203ENST00000467533 SPAG1Q07617 926 aa11.1□□□□□ -0.63
HDAC3-203ENST00000467533 GRIK2Q13002 908 aa11.1□□□□□ -0.63
HDAC3-203ENST00000467533 TSGA10IPQ3SY00 556 aa11.1□□□□□ -0.63
HDAC3-203ENST00000467533 HSF5Q4G112 596 aaPredicted RBP11.1□□□□□ -0.63
HDAC3-203ENST00000467533 SLC41A1Q8IVJ1 513 aa11.1□□□□□ -0.63
HDAC3-203ENST00000467533 FAM177A1Q8N128 213 aaPredicted RBP11.1□□□□□ -0.63
HDAC3-203ENST00000467533 TRIML1Q8N9V2 468 aa11.1□□□□□ -0.63
HDAC3-203ENST00000467533 STKLD1Q8NE28 680 aa11.1□□□□□ -0.63
HDAC3-203ENST00000467533 OR10T2Q8NGX3 314 aa11.1□□□□□ -0.63
HDAC3-203ENST00000467533 TARS2Q9BW92 718 aaKnown RBP11.1□□□□□ -0.63
HDAC3-203ENST00000467533 PRDM16Q9HAZ2 1276 aa11.1□□□□□ -0.63
HDAC3-203ENST00000467533 POLD4Q9HCU8 107 aa11.1□□□□□ -0.63
HDAC3-203ENST00000467533 ZDHHC4Q9NPG8 344 aa11.1□□□□□ -0.63
HDAC3-203ENST00000467533 SUSD2Q9UGT4 822 aa11.1□□□□□ -0.63
HDAC3-203ENST00000467533 GON4LQ3T8J9 2241 aa11.1□□□□□ -0.63
HDAC3-203ENST00000467533 TRAV19A0A0A6YYK7 116 aa11.09□□□□□ -0.63
HDAC3-203ENST00000467533 TEX51A0A1B0GUA7 166 aa11.09□□□□□ -0.63
HDAC3-203ENST00000467533 CPLX1O14810 134 aa11.09□□□□□ -0.63
HDAC3-203ENST00000467533 USP17L7P0C7H9 530 aa11.09□□□□□ -0.63
HDAC3-203ENST00000467533 ATXN1LP0C7T5 689 aaKnown RBP11.09□□□□□ -0.63
HDAC3-203ENST00000467533 HLA-EP13747 358 aa11.09□□□□□ -0.63
HDAC3-203ENST00000467533 GNSP15586 552 aa11.09□□□□□ -0.63
HDAC3-203ENST00000467533 LRPAP1P30533 357 aa11.09□□□□□ -0.63
HDAC3-203ENST00000467533 TXKP42681 527 aa11.09□□□□□ -0.63
HDAC3-203ENST00000467533 KCNC4Q03721 635 aa11.09□□□□□ -0.63
HDAC3-203ENST00000467533 CAMK2BQ13554 666 aa11.09□□□□□ -0.63
HDAC3-203ENST00000467533 SEZ6Q53EL9 994 aa11.09□□□□□ -0.63
HDAC3-203ENST00000467533 CCDC157Q569K6 752 aa11.09□□□□□ -0.63
HDAC3-203ENST00000467533 BLOC1S2Q6QNY1 142 aa11.09□□□□□ -0.63
HDAC3-203ENST00000467533 MPZL3Q6UWV2 235 aa11.09□□□□□ -0.63
HDAC3-203ENST00000467533 GPR155Q7Z3F1 870 aa11.09□□□□□ -0.63
HDAC3-203ENST00000467533 SFTPA1Q8IWL2 248 aa11.09□□□□□ -0.63
HDAC3-203ENST00000467533 NXPE2Q96DL1 559 aa11.09□□□□□ -0.63
HDAC3-203ENST00000467533 DRC1Q96MC2 740 aa11.09□□□□□ -0.63
HDAC3-203ENST00000467533 YTHDC1Q96MU7 727 aaKnown RBP11.09□□□□□ -0.63
HDAC3-203ENST00000467533 JAKMIP1Q96N16 626 aaKnown RBP11.09□□□□□ -0.63
HDAC3-203ENST00000467533 ARID3AQ99856 593 aa11.09□□□□□ -0.63
HDAC3-203ENST00000467533 FAM124BQ9H5Z6 455 aaPredicted RBP11.09□□□□□ -0.63
HDAC3-203ENST00000467533 TMEM206Q9H813 350 aa11.09□□□□□ -0.63
HDAC3-203ENST00000467533 PTPRHQ9HD43 1115 aa11.09□□□□□ -0.63
HDAC3-203ENST00000467533 TOR4AQ9NXH8 423 aa11.09□□□□□ -0.63
HDAC3-203ENST00000467533 ABI2Q9NYB9 513 aaPredicted RBP11.09□□□□□ -0.63
HDAC3-203ENST00000467533 CALCOCO1Q9P1Z2 691 aa11.09□□□□□ -0.63
HDAC3-203ENST00000467533 STK36Q9NRP7 1315 aa11.09□□□□□ -0.63
HDAC3-203ENST00000467533 COL5A1P20908 1838 aaPredicted RBP11.08□□□□□ -0.64
HDAC3-203ENST00000467533 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.08□□□□□ -0.64
HDAC3-203ENST00000467533 IGHV1OR15-9A0A0B4J2B8 117 aa11.08□□□□□ -0.64
HDAC3-203ENST00000467533 CCDC169A6NNP5 214 aa11.08□□□□□ -0.64
HDAC3-203ENST00000467533 RRP8O43159 456 aaKnown RBP11.08□□□□□ -0.64
HDAC3-203ENST00000467533 APODP05090 189 aa11.08□□□□□ -0.64
HDAC3-203ENST00000467533 CSH1P0DML2 217 aa11.08□□□□□ -0.64
HDAC3-203ENST00000467533 CSH2P0DML3 217 aa11.08□□□□□ -0.64
HDAC3-203ENST00000467533 CXCL8P10145 99 aa11.08□□□□□ -0.64
HDAC3-203ENST00000467533 HAPLN1P10915 354 aaPredicted RBP11.08□□□□□ -0.64
HDAC3-203ENST00000467533 HMGA1P17096 107 aaKnown RBP11.08□□□□□ -0.64
HDAC3-203ENST00000467533 PDIA3P30101 505 aaKnown RBP11.08□□□□□ -0.64
HDAC3-203ENST00000467533 KDSRQ06136 332 aa11.08□□□□□ -0.64
HDAC3-203ENST00000467533 SLC10A6Q3KNW5 377 aa11.08□□□□□ -0.64
HDAC3-203ENST00000467533 TAF1BQ53T94 588 aaPredicted RBP11.08□□□□□ -0.64
HDAC3-203ENST00000467533 SPATA18Q8TC71 538 aa11.08□□□□□ -0.64
HDAC3-203ENST00000467533 SPPL2BQ8TCT7 592 aa11.08□□□□□ -0.64
HDAC3-203ENST00000467533 SH3RF2Q8TEC5 729 aa11.08□□□□□ -0.64
HDAC3-203ENST00000467533 C2orf15Q8WU43 125 aaKnown RBP11.08□□□□□ -0.64
HDAC3-203ENST00000467533 KIFAP3Q92845 792 aa11.08□□□□□ -0.64
HDAC3-203ENST00000467533 CDC6Q99741 560 aa11.08□□□□□ -0.64
HDAC3-203ENST00000467533 ZDHHC5Q9C0B5 715 aa11.08□□□□□ -0.64
HDAC3-203ENST00000467533 ZCWPW1Q9H0M4 648 aa11.08□□□□□ -0.64
HDAC3-203ENST00000467533 LINC00597Q9H2U6 94 aa11.08□□□□□ -0.64
HDAC3-203ENST00000467533 TUFT1Q9NNX1 390 aa11.08□□□□□ -0.64
HDAC3-203ENST00000467533 UBQLN1Q9UMX0 589 aaKnown RBP11.08□□□□□ -0.64
HDAC3-203ENST00000467533 CYP8B1Q9UNU6 501 aa11.08□□□□□ -0.64
HDAC3-203ENST00000467533 ANAPC1Q9H1A4 1944 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 FAM205CA6NFA0 338 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 MYMKA6NI61 221 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 E9PAM4 449 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 PLK4O00444 970 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 XPOTO43592 962 aaKnown RBP11.07□□□□□ -0.64
HDAC3-203ENST00000467533 ADAM23O75077 832 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 MED24O75448 989 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 TADA3O75528 432 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 KAT7O95251 611 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 SPATA31C1P0DKV0 1188 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 GABRG2P18507 467 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 PROZP22891 400 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 EIF2S3P41091 472 aaKnown RBP11.07□□□□□ -0.64
HDAC3-203ENST00000467533 GUCY2FP51841 1108 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 RESTQ13127 1097 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 KCNB1Q14721 858 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms