RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 UBN1Q9NPG3 1134 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 GDF3Q9NR23 364 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 FAM53CQ9NYF3 392 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 HMGXB4Q9UGU5 601 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 DMGDHQ9UI17 866 aaKnown RBP10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 L1RE1Q9UN81 338 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 GOLGA6L10A0A0M3HER8 536 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 A0A0U1RQF3 1178 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 SIGLEC16A6NMB1 481 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 MAP2K7O14733 419 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 INPPL1O15357 1258 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 SART1O43290 800 aaKnown RBP10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 CTSHP09668 335 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 PYGMP11217 842 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 WARSP23381 471 aaKnown RBP10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 GRK4P32298 578 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 RPL9P32969 192 aaKnown RBP10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 SOX4Q06945 474 aaPredicted RBP10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 NFX1Q12986 1120 aaKnown RBP10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 PAK2Q13177 524 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 PIGHQ14442 188 aaPredicted RBP10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 LPIN1Q14693 890 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 CYP1B1Q16678 543 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 PTPROQ16827 1216 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 SOWAHAQ2M3V2 549 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 PKDCCQ504Y2 493 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 TRAF7Q6Q0C0 670 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 MAATS1Q7Z4T9 603 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 RHOT1Q8IXI2 618 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 KATNAL2Q8IYT4 538 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 ZNF784Q8NCA9 323 aaPredicted RBP10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 GSTCDQ8NEC7 633 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 CCDC26Q8TAB7 109 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 SPATA18Q8TC71 538 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 ZNF296Q8WUU4 475 aaPredicted RBP10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 MAIP1Q8WWC4 291 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 PGBD4Q96DM1 585 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 C18orf8Q96DM3 657 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 MCRS1Q96EZ8 462 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 KRT12Q99456 494 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 FUT8Q9BYC5 575 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 TRIM7Q9C029 511 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 KLK14Q9P0G3 267 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 PADI3Q9ULW8 664 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 PHF24Q9UPV7 400 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 NOD1Q9Y239 953 aa10.08□□□□□ -0.8
APOBEC1-202ENST00000467171 MGAMO43451 1857 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 A0A0U1RQG5 324 aaPredicted RBP10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 FAM170AA1A519 330 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 M0QYV0 167 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 FSCN2O14926 492 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 SPTLC1O15269 473 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 THP07101 528 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 GHRP10912 638 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 CD52P31358 61 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 SSTR3P32745 418 aaPredicted RBP10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 MARCKSL1P49006 195 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 SNX16P57768 344 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 LILRA4P59901 499 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 RNASE9P60153 205 aaKnown RBP10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 PSMC1P62191 440 aaKnown RBP10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 PDCLQ13371 301 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 ACAP1Q15027 740 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 C2CD6Q53TS8 623 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 LLGL2Q6P1M3 1020 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 DCUN1D2Q6PH85 259 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 AGMOQ6ZNB7 445 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 XYLT1Q86Y38 959 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 SLC13A5Q86YT5 568 aaPredicted RBP10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 APPL2Q8NEU8 664 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 IPO4Q8TEX9 1081 aaKnown RBP10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 HDAC7Q8WUI4 952 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 KBTBD7Q8WVZ9 684 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 SEC14L1Q92503 715 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 CYLDQ9NQC7 956 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 TRMT13Q9NUP7 481 aaKnown RBP10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 OGFRQ9NZT2 677 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 CYTH4Q9UIA0 394 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 TSPAN16Q9UKR8 245 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 MTUS1Q9ULD2 1270 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 NME7Q9Y5B8 376 aa10.07□□□□□ -0.8
APOBEC1-202ENST00000467171 KAT6AQ92794 2004 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 A0A1W2PQ45 241 aaPredicted RBP10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 A0A1W2PQY0 241 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 FAM187AA6NFU0 413 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 A8MXQ7 604 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 ARVCFO00192 962 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 GABRDO14764 452 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 RAD51CO43502 376 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 HUS1O60921 280 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 PHF2O75151 1096 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 SEC31AO94979 1220 aaKnown RBP10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 GLI1P08151 1106 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 PFKMP08237 780 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 KRT3P12035 628 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 CHRNA3P32297 505 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 GNL1P36915 607 aaPredicted RBP10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 SCNN1AP37088 669 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms