RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 CLSTN3Q9BQT9 956 aa11.4□□□□□ -0.58
NUP188-204ENST00000467044 ZSWIM1Q9BR11 485 aa11.4□□□□□ -0.58
NUP188-204ENST00000467044 B3GNT5Q9BYG0 378 aa11.4□□□□□ -0.58
NUP188-204ENST00000467044 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.4□□□□□ -0.58
NUP188-204ENST00000467044 TMLHEQ9NVH6 421 aa11.4□□□□□ -0.58
NUP188-204ENST00000467044 ABI2Q9NYB9 513 aaPredicted RBP11.4□□□□□ -0.58
NUP188-204ENST00000467044 HESX1Q9UBX0 185 aa11.4□□□□□ -0.58
NUP188-204ENST00000467044 ADAMTS1Q9UHI8 967 aa11.4□□□□□ -0.58
NUP188-204ENST00000467044 NOCTQ9UK39 431 aaKnown RBP11.4□□□□□ -0.58
NUP188-204ENST00000467044 TSPAN16Q9UKR8 245 aa11.4□□□□□ -0.58
NUP188-204ENST00000467044 CEP83Q9Y592 693 aa11.4□□□□□ -0.58
NUP188-204ENST00000467044 ATP8B3O60423 1300 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 SSU72P8A0A1W2PR75 194 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 TMCO5BA8MYB1 307 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 M0QYV0 167 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 RFXAPO00287 272 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 FECHP22830 423 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 BDNFP23560 247 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 IRS1P35568 1242 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 CYLC1P35663 651 aaPredicted RBP11.39□□□□□ -0.59
NUP188-204ENST00000467044 KIF11P52732 1056 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 FMO1Q01740 532 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 ROR1Q01973 937 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 GPR17Q13304 367 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 MAPK8IP2Q13387 824 aaPredicted RBP11.39□□□□□ -0.59
NUP188-204ENST00000467044 LRIT3Q3SXY7 679 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 PRPF38BQ5VTL8 546 aaKnown RBP11.39□□□□□ -0.59
NUP188-204ENST00000467044 DENND1BQ6P3S1 775 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 LCLAT1Q6UWP7 414 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 PALB2Q86YC2 1186 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 TMEM139Q8IV31 216 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 GPR65Q8IYL9 337 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 FUKQ8N0W3 1084 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 GDPD5Q8WTR4 605 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 PKMYT1Q99640 499 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 HNRNPABQ99729 332 aaKnown RBP11.39□□□□□ -0.59
NUP188-204ENST00000467044 EMILIN2Q9BXX0 1053 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 ZNF518BQ9C0D4 1074 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 NGRNQ9NPE2 291 aaKnown RBP11.39□□□□□ -0.59
NUP188-204ENST00000467044 PCDHGC3Q9UN70 934 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.39□□□□□ -0.59
NUP188-204ENST00000467044 PCDHB5Q9Y5E4 795 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 PCDHGC5Q9Y5F6 944 aa11.39□□□□□ -0.59
NUP188-204ENST00000467044 LAMA2P24043 3122 aaKnown RBP11.39□□□□□ -0.59
NUP188-204ENST00000467044 A0A087X0T9 212 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 WDR27A2RRH5 827 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 EPOPA6NHQ4 379 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 HIDE1A8MVS5 230 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 DDX3XO00571 662 aaKnown RBP eCLIP11.38□□□□□ -0.59
NUP188-204ENST00000467044 TEX28O15482 410 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 LILRB3O75022 631 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 AP1G2O75843 785 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 CNPP09543 421 aaKnown RBP11.38□□□□□ -0.59
NUP188-204ENST00000467044 FAM228BP0C875 321 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 FAM200BP0CF97 657 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 KLRC2P26717 231 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 DEKP35659 375 aaKnown RBP11.38□□□□□ -0.59
NUP188-204ENST00000467044 NDUFV1P49821 464 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 SLC8A3P57103 927 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 CCZ1BP86790 482 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 CCZ1P86791 482 aaPredicted RBP11.38□□□□□ -0.59
NUP188-204ENST00000467044 GFPT1Q06210 699 aaPredicted RBP11.38□□□□□ -0.59
NUP188-204ENST00000467044 MTF1Q14872 753 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 CCDC122Q5T0U0 273 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 SLC8B1Q6J4K2 584 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 PDE12Q6L8Q7 609 aaKnown RBP11.38□□□□□ -0.59
NUP188-204ENST00000467044 RAD9BQ6WBX8 426 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 TRIM72Q6ZMU5 477 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 RNF19BQ6ZMZ0 732 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 PAQR9Q6ZVX9 377 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 FAM35AQ86V20 835 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 SCN4BQ8IWT1 228 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 CCDC170Q8IYT3 715 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 MRPL43Q8N983 215 aaKnown RBP11.38□□□□□ -0.59
NUP188-204ENST00000467044 ANKRD52Q8NB46 1076 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 ATAD1Q8NBU5 361 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 TMEM35BQ8NCS4 154 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 TRIM44Q96DX7 344 aaPredicted RBP11.38□□□□□ -0.59
NUP188-204ENST00000467044 KLHL5Q96PQ7 755 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 PCDHB18PQ96TA0 734 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 SYT11Q9BT88 431 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 RHOBTB2Q9BYZ6 727 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 ZNF576Q9H609 170 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 RXFP1Q9HBX9 757 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 KRT82Q9NSB4 513 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 SPTLC3Q9NUV7 552 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 FNIP2Q9P278 1114 aa11.38□□□□□ -0.59
NUP188-204ENST00000467044 EPN1Q9Y6I3 576 aaPredicted RBP11.38□□□□□ -0.59
NUP188-204ENST00000467044 MTMR11A4FU01 709 aa11.37□□□□□ -0.59
NUP188-204ENST00000467044 C2orf71A6NGG8 1288 aa11.37□□□□□ -0.59
NUP188-204ENST00000467044 FSCN2O14926 492 aa11.37□□□□□ -0.59
NUP188-204ENST00000467044 ARHGAP6O43182 974 aa11.37□□□□□ -0.59
NUP188-204ENST00000467044 NDUFA10O95299 355 aa11.37□□□□□ -0.59
NUP188-204ENST00000467044 IPO7O95373 1038 aaKnown RBP11.37□□□□□ -0.59
NUP188-204ENST00000467044 ADH1AP07327 375 aa11.37□□□□□ -0.59
NUP188-204ENST00000467044 CYP2F1P24903 491 aa11.37□□□□□ -0.59
NUP188-204ENST00000467044 ANXA13P27216 316 aa11.37□□□□□ -0.59
NUP188-204ENST00000467044 ELF1P32519 619 aa11.37□□□□□ -0.59
NUP188-204ENST00000467044 GRIK1P39086 918 aa11.37□□□□□ -0.59
NUP188-204ENST00000467044 BCAT1P54687 386 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms