RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 ADCY1Q08828 1119 aa6.17□□□□□ -1.42
LRCH3-212ENST00000466845 IFIT5Q13325 482 aaKnown RBP6.17□□□□□ -1.42
LRCH3-212ENST00000466845 ODF1Q14990 250 aa6.17□□□□□ -1.42
LRCH3-212ENST00000466845 MMEL1Q495T6 779 aa6.17□□□□□ -1.42
LRCH3-212ENST00000466845 SMUG1Q53HV7 270 aa6.17□□□□□ -1.42
LRCH3-212ENST00000466845 SH2D4BQ5SQS7 431 aa6.17□□□□□ -1.42
LRCH3-212ENST00000466845 GPR158Q5T848 1215 aa6.17□□□□□ -1.42
LRCH3-212ENST00000466845 CAPRIN2Q6IMN6 1127 aaKnown RBP6.17□□□□□ -1.42
LRCH3-212ENST00000466845 ANGPTL8Q6UXH0 198 aa6.17□□□□□ -1.42
LRCH3-212ENST00000466845 SEPT14Q6ZU15 432 aa6.17□□□□□ -1.42
LRCH3-212ENST00000466845 KDELC2Q7Z4H8 507 aa6.17□□□□□ -1.42
LRCH3-212ENST00000466845 OSTM1Q86WC4 334 aa6.17□□□□□ -1.42
LRCH3-212ENST00000466845 CIR1Q86X95 450 aaPredicted RBP6.17□□□□□ -1.42
LRCH3-212ENST00000466845 LRRC71Q8N4P6 559 aa6.17□□□□□ -1.42
LRCH3-212ENST00000466845 CCHCR1Q8TD31 782 aa6.17□□□□□ -1.42
LRCH3-212ENST00000466845 CDK5RAP1Q96SZ6 601 aaKnown RBP6.17□□□□□ -1.42
LRCH3-212ENST00000466845 MYD88Q99836 296 aa6.17□□□□□ -1.42
LRCH3-212ENST00000466845 ZPBPQ9BS86 351 aa6.17□□□□□ -1.42
LRCH3-212ENST00000466845 OSBPL10Q9BXB5 764 aa6.17□□□□□ -1.42
LRCH3-212ENST00000466845 KIAA1683Q9H0B3 1180 aa6.17□□□□□ -1.42
LRCH3-212ENST00000466845 MSL2Q9HCI7 577 aa6.17□□□□□ -1.42
LRCH3-212ENST00000466845 RIC8BQ9NVN3 520 aa6.17□□□□□ -1.42
LRCH3-212ENST00000466845 DDX18Q9NVP1 670 aaKnown RBP6.17□□□□□ -1.42
LRCH3-212ENST00000466845 CCPG1Q9ULG6 757 aa6.17□□□□□ -1.42
LRCH3-212ENST00000466845 HPCAL4Q9UM19 191 aa6.17□□□□□ -1.42
LRCH3-212ENST00000466845 ZNF804BA4D1E1 1349 aa6.17□□□□□ -1.42
LRCH3-212ENST00000466845 TNKSO95271 1327 aa6.17□□□□□ -1.42
LRCH3-212ENST00000466845 FRMPD2Q68DX3 1309 aaPredicted RBP6.17□□□□□ -1.42
LRCH3-212ENST00000466845 UHRF1BP1Q6BDS2 1440 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 CNTLNQ9NXG0 1405 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 KIAA1107Q9UPP5 1409 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 AGLP35573 1532 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 INO80Q9ULG1 1556 aaPredicted RBP6.16□□□□□ -1.42
LRCH3-212ENST00000466845 GPR75-ASB3A0A0A6YYF3 556 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 H7C0S8 307 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 ZNF561-AS1K7EIQ3 104 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 AP3B1O00203 1094 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 CACNB4O00305 520 aaPredicted RBP6.16□□□□□ -1.42
LRCH3-212ENST00000466845 MAN2B1O00754 1011 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 KDM1AO60341 852 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 B4GALT4O60513 344 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 GOSR1O95249 250 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 DDX58O95786 925 aaKnown RBP6.16□□□□□ -1.42
LRCH3-212ENST00000466845 S100A6P06703 90 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 RPSAP08865 295 aaKnown RBP6.16□□□□□ -1.42
LRCH3-212ENST00000466845 ELF1P32519 619 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 CLCN2P51788 898 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 HNRNPMP52272 730 aaKnown RBP eCLIP6.16□□□□□ -1.42
LRCH3-212ENST00000466845 TGFB2P61812 414 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 BNIP1Q12981 228 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 SUPT20HL1Q3ZLR7 823 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 MINDY4Q4G0A6 757 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 KRBOX4Q5JUW0 171 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 ALKBH5Q6P6C2 394 aaKnown RBP6.16□□□□□ -1.42
LRCH3-212ENST00000466845 NUP54Q7Z3B4 507 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 ATG9AQ7Z3C6 839 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 TMEM57Q8N5G2 664 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 STPG3Q8N7X2 389 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 NUDT10Q8NFP7 164 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 TRIM58Q8NG06 486 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 FBXO30Q8TB52 745 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 DVL3Q92997 716 aaPredicted RBP6.16□□□□□ -1.42
LRCH3-212ENST00000466845 NUDT11Q96G61 164 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 COG3Q96JB2 828 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 SEC62Q99442 399 aaKnown RBP6.16□□□□□ -1.42
LRCH3-212ENST00000466845 CARD11Q9BXL7 1154 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 KRTAP4-11Q9BYQ6 195 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 KRTAP4-2Q9BYR5 136 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 CELF4Q9BZC1 486 aaKnown RBP6.16□□□□□ -1.42
LRCH3-212ENST00000466845 CD244Q9BZW8 370 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 GPR108Q9NPR9 543 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 PPP4R1LQ9P1A2 415 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 RBPJLQ9UBG7 517 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 AGO2Q9UKV8 859 aaKnown RBP6.16□□□□□ -1.42
LRCH3-212ENST00000466845 ZBTB21Q9ULJ3 1066 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 GPR34Q9UPC5 381 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 ATP11BQ9Y2G3 1177 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 PCDHA9Q9Y5H5 950 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 SLC4A4Q9Y6R1 1079 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 GAKO14976 1311 aa6.16□□□□□ -1.42
LRCH3-212ENST00000466845 NCOA2Q15596 1464 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 ADGBQ8N7X0 1667 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.15□□□□□ -1.42
LRCH3-212ENST00000466845 FAM90A27PA6NNH2 459 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 B4E1Z4 1266 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 RNF113AO15541 343 aaKnown RBP6.15□□□□□ -1.42
LRCH3-212ENST00000466845 PALMO75781 387 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 USP1O94782 785 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 AMY2AP04746 511 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 SRGAP2CP0DJJ0 459 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 ZKSCAN1P17029 563 aaPredicted RBP6.15□□□□□ -1.42
LRCH3-212ENST00000466845 TFEBP19484 476 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 AMY2BP19961 511 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 PSMA4P25789 261 aaKnown RBP6.15□□□□□ -1.42
LRCH3-212ENST00000466845 ATP5OP48047 213 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 GLRBP48167 497 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 NR2C2P49116 596 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 ETV1P50549 477 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 CCNA1P78396 465 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms