RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 GABRB3P28472 473 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 PPM1FP49593 454 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 HSD11B2P80365 405 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 OCA2Q04671 838 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 FPGSQ05932 587 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 FOXO1Q12778 655 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 PTK2BQ14289 1009 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 PRKD1Q15139 912 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 PFKFB4Q16877 469 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 ZNF750Q32MQ0 723 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 RRAGBQ5VZM2 374 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 SP5Q6BEB4 398 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 MZT2AQ6P582 158 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 CCDC174Q6PII3 467 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 MICALCLQ6ZW33 695 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 TMPRSS6Q8IU80 811 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 CPT1CQ8TCG5 803 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 LTV1Q96GA3 475 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 SCLT1Q96NL6 688 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 OSBPL9Q96SU4 736 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 ISCA1Q9BUE6 129 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 ZNF703Q9H7S9 590 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 ZBTB26Q9HCK0 441 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 RGL1Q9NZL6 768 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 RAPGEFL1Q9UHV5 662 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 CDY1Q9Y6F8 540 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 AATKQ6ZMQ8 1374 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 FAM234BA2RU67 622 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 PODXLO00592 558 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 TOR1BO14657 336 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 TLR5O60602 858 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 ELANEP08246 267 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 CCT5P48643 541 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 PTDSS1P48651 473 aaKnown RBP5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 SELENOPP49908 381 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 ZNF134P52741 427 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 POLE2P56282 527 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 KRT17Q04695 432 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 E2F2Q14209 437 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 SPARCL1Q14515 664 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 RAB30Q15771 203 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 MAPKAPK3Q16644 382 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 TUBB8Q3ZCM7 444 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 B3GNTL1Q67FW5 361 aaPredicted RBP5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 LRRC55Q6ZSA7 311 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 KIAA0408Q6ZU52 694 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 ZNF354CQ86Y25 554 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 COLGALT2Q8IYK4 626 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 CPXCR1Q8N123 301 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 GLIS1Q8NBF1 620 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 CHST13Q8NET6 341 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 PPP2R3CQ969Q6 453 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 ZSWIM1Q9BR11 485 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 TRIM5Q9C035 493 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 MYLK2Q9H1R3 596 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 GALNT9Q9HCQ5 603 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 DNMT3BQ9UBC3 853 aaKnown RBP5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 CA14Q9ULX7 337 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 NOX1Q9Y5S8 564 aa5.18□□□□□ -1.58
CDC42BPA-211ENST00000466538 CCDC78A2IDD5 438 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 F5H697 171 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 H7C4K7 107 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 NPC1O15118 1278 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 COQ9O75208 318 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 PPFIA4O75335 1185 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 NDST3O95803 873 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 FGAP02671 866 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 HSD3B1P14060 373 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 HOXA5P20719 270 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 KCNA3P22001 575 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 PDIA3P30101 505 aaKnown RBP5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 PPIFP30405 207 aaKnown RBP5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 BMPR1AP36894 532 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 NDUFV1P49821 464 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 LILRA4P59901 499 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 CXADRP78310 365 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 MYO1EQ12965 1108 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 TOB2Q14106 344 aaPredicted RBP5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 CYP2A13Q16696 494 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 MRNIPQ6NTE8 343 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 TMEM108Q6UXF1 575 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 ZNF280BQ86YH2 543 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 CXorf38Q8TB03 319 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 BPIFB1Q8TDL5 484 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 SNX19Q92543 992 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 TRIM63Q969Q1 353 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 FUBP1Q96AE4 644 aaKnown RBP5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 LOXL4Q96JB6 756 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 ZNF668Q96K58 619 aaPredicted RBP5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 FAM227BQ96M60 508 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 CDK5RAP1Q96SZ6 601 aaKnown RBP5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 RMDN3Q96TC7 470 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 PAGR1Q9BTK6 254 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 ZCWPW1Q9H0M4 648 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 SMOC2Q9H3U7 446 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 OBP2BQ9NPH6 170 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 AKIP1Q9NQ31 210 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 PARPBPQ9NWS1 579 aa5.17□□□□□ -1.58
CDC42BPA-211ENST00000466538 TMOD4Q9NZQ9 345 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms